Trichomycterus rosablanca: 134318270
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Entry
134318270 CDS
T09921
Symbol
rapgef1a
Name
(RefSeq) rap guanine nucleotide exchange factor 1 isoform X1
KO
K06277
Rap guanine nucleotide exchange factor 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn04510
Focal adhesion
trn04910
Insulin signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134318270 (rapgef1a)
09150 Organismal Systems
09152 Endocrine system
04910 Insulin signaling pathway
134318270 (rapgef1a)
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Gene cluster
GFIT
Motif
Pfam:
RasGEF
RasGEF_N
Cgl0159
Motif
Other DBs
NCBI-GeneID:
134318270
NCBI-ProteinID:
XP_062855170
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Position
7:20255343..20301091
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AA seq
1114 aa
AA seq
DB search
MSGKIDSKHDSQRSNLSTFTMKLIDKFHSPKPKRISSKKPPKPSAERSVKTAEKHGTKPL
SRLEELEKEVVSALRYFKTIIDKMVVDRKVLEMLPGSASKVLEAVVPIVQLDPKIQNSST
VSSCLSRVYQSLGNLIRWSDKVMLEGVILEDKETIQTVTSIIKTVLDGVKELVRLVIEKQ
QHPSPTSPTAKTVPSVSSSQSVLEPPVIETEDESSTNCSALSHSTEALADAPSTKELAPP
KPPLPGLKVPEHYPPALPPKKRQSAPSPTRIAVVAPMSRATSGSSLPIVICKQNYDADGL
QRRFSGGSHSFGGESPRVSPCGSMGKLSKSDEQLSSLEQDSGQCSRNTSCETLDTADFYD
PDYDFLREDLSSVDQITLSAGSCLSPLPESYRESSSSCPGQFPCGSPSVLYPGSSPYSVN
NPPALPEKKRRSANPQTPFDGMTPQTFFERHHSHYDNVTDDEMPVPPFPVFPLIASGTPT
GYEVDYVASENAHIPQSPPPLPEKKSKHIQKYMQAVEDYSEPQPSVFYQTPQSESIYEQR
IRLLQEVYGFNDSFSSSDSVHDPLPPPALPPKQRQLASSHSASPSSSSSSSLSCQLQPCA
GGLGSAEMDVALSLSTSSLSLGCQASLPASTSQNSSNEGGDGEYVNLYSSSQANGDPPHP
NGDPSCGAEDSLQDSTLDQSKEQNDMESWKQRCTDSDLSSEELDELSLLDHSEIMSRITL
KREVDDGPDVRAGSEDILLVHATETDRKDLVYCEAFLTTYRTFLTPEDLIKKLRYRFTRF
SHSSDTVKKRVSKNTFFVLVRVVDELCLVELTEDILKQLMDLVVSLVCSGELSLARVLRK
NILEKVTQKKQLNYTNSMKTLAARSVAARPGTLHDFRSHEIADQLTLLDAELFYKIEIPE
VLLWAKEQNEEKSPNLTQFTEHFNNMSYWVRSIIIQQEKAQDREKLLLKFIKIMKHLRKL
NNFNSYLAILSALDSAPIRRLEWQKQTSEGLEEYCTLIDSSSSFRAYRVALADVEPPCIP
YLGLILQDLTFVHLGNPDFIKGKVNFSKRWQQFNILDTMRRFQQVHYDLKHNDEIVSFFN
DFSDHLAEEALWELSLKIKPRNITRRKTEREEKT
NT seq
3345 nt
NT seq
+upstream
nt +downstream
nt
atgtcggggaaaatcgacagcaaacacgactctcagcgctccaacttgtcaaccttcaca
atgaagttaatagacaaatttcactcccccaagccaaaacgaatatcttcaaagaagcca
ccaaagccttcagcagagcgaagtgtcaagactgctgagaaacatggaactaagcctctt
agtcggttggaagagctggagaaagaggttgtcagtgccttgcgttactttaagacaata
attgataagatggtggtggacagaaaagttctggaaatgcttcccggttctgccagtaaa
gtattagaggctgtcgtgcctatagtacaactagatcccaagattcaaaacagttcgacc
gtgtcttcatgcctcagccgagtgtatcaaagtctagggaatctgatccgctggtccgac
aaggtgatgctggagggagtaatcctagaggacaaggagaccatccagaccgtaaccagc
atcataaaaacggtcctggatggagtaaaggagctagtaaggctggtcatagagaaacag
cagcacccatccccaacttcacccacagccaaaacagtcccatccgtatccagctcacag
agtgttttggagcctcctgttatagagactgaagatgagagctcaacaaactgctctgca
ttgagtcattccactgaggctctggcagatgcaccgtctactaaagagctggcacctcct
aaaccccctctccccggactgaaagtgcctgagcactatccccctgctcttcctccgaaa
aagcgtcagtcggctccatcccctacacgaattgctgtggttgcaccgatgagccgtgca
acaagcggatctagtcttccaattgtcatctgcaaacagaattacgatgcagatggatta
cagaggcgtttttctggcggcagtcactcctttggtggcgagtcaccacgtgtttcgccg
tgtggcagcatgggcaagctgagcaaatctgacgaacagctgtcttcactggagcaagac
agcgggcagtgctcacgcaacaccagctgtgaaacgctagatacagctgacttctacgac
ccagactatgacttccttcgagaggacctgtccagcgtagatcagatcactttgtctgca
ggaagctgcctcagccccctgcccgagtcctatcgggagtcctcttcttcttgtcctggc
cagtttccctgtggatcaccctcagtcctttatcctggttcttctccttactctgtcaat
aatccacctgctcttccagaaaaaaaacgacgcagcgctaacccgcagacccccttcgac
ggtatgacacctcagactttctttgagcgccaccattcccactacgataacgttactgat
gacgaaatgcccgtaccacctttccctgtttttcctctgattgcctccggcacccccact
ggctatgaggtggactatgttgcttcagagaatgctcatataccacagtctcctccacct
ctgcctgagaagaaaagcaaacacatccaaaaatacatgcaggcagtggaggattactcg
gaaccacagccatctgtcttctaccagaccccacagagcgagagcatctacgagcagcgc
atcaggctcttacaggaagtgtacggcttcaacgactccttcagcagtagtgactctgtg
cacgatcctctccctcctcctgcgctcccacccaaacagagacagctggcctcctctcac
tctgcttctccctcctcatcctcctcttcctctctgtcgtgccaactgcagccatgtgca
ggaggccttggttcagctgagatggatgttgctctcagtctgtccacctcaagtctctct
ctgggctgccaggcctctcttcctgcctccacgagccagaattctagtaatgagggtggc
gatggtgagtacgtcaatctgtattcatccagtcaagccaacggagacccaccacacccg
aacggtgatcccagctgtggagcagaagattcactccaggactcaacactggaccaaagc
aaagagcagaacgacatggagagctggaagcagaggtgtacagactcagacctgagctct
gaggagctggatgagctgtctctgctggaccacagtgagatcatgtcacgcattacacta
aaacgagaggttgatgatggtccagatgtccgagccggatcggaagacattttattagtt
catgcaacagaaacggatcgaaaagatttggtgtattgtgaagcttttctgacaacatac
aggacctttctaacccctgaggacctcattaagaagctccgctatagatttaccagattt
tctcacagttcagacactgtcaagaagcgagtcagcaaaaacacgttcttcgtgcttgta
cgtgtagtggacgagctttgtttggtggagctgactgaagacattctgaagcagctgatg
gacttggtggtcagtctagtgtgtagtggagagctcagtctggctcgagtcctgcgcaaa
aacattctggagaaagtgacgcaaaagaagcagttgaactacactaactcgatgaagacg
ctagctgctcgcagcgttgccgccagacctggtacacttcatgactttcgaagtcatgaa
atcgcagaccagctcactctcctggatgcagaactgttctacaaaattgagattccagag
gttctgctgtgggcaaaggaacagaatgaagagaagagtcctaatctcacccagttcaca
gagcacttcaacaacatgtcttactgggtacggtccataataatccagcaagaaaaagct
caagacagagaaaaactgctccttaagtttattaaaatcatgaagcacttaagaaaactc
aataactttaactcctacttggctatactgtcggctcttgactctgcgccaattcggaga
ttggagtggcagaagcaaacctcagagggcctggaagaatactgcactttaatcgatagc
tcctcttcattccgggcataccgagtagctttggcagacgttgagcctccctgtatacca
tacctgggtctcatccttcaggacttgactttcgtgcaccttggaaatcccgactttatt
aagggcaaggtgaacttttcaaaacgctggcagcagttcaacatcctggacaccatgcgg
cgctttcagcaagtgcattacgacctgaaacacaatgatgaaattgtatccttcttcaat
gacttcagtgaccatcttgctgaggaggcattatgggaactctctctaaagatcaaacca
cgaaacatcacacgacgcaaaacagagcgggaggagaaaacgtag
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