Trichomycterus rosablanca: 134318287
Help
Entry
134318287 CDS
T09921
Symbol
nr1h5
Name
(RefSeq) nuclear receptor subfamily 1, group H, member 5 isoform X1
KO
K08538
farnesoid X receptor beta
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134318287 (nr1h5)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
trn03310
]
134318287 (nr1h5)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134318287 (nr1h5)
Nuclear receptors [BR:
trn03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
134318287 (nr1h5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
134318287
NCBI-ProteinID:
XP_062855200
LinkDB
All DBs
Position
7:21260613..21282110
Genome browser
AA seq
504 aa
AA seq
DB search
MYGKANQEDIGRVNAENIRAAAKMREWMDSEMSLTAGSYLSGGETYSIAEPQYYDVLVDQ
DFDLQAFPYSQQHYSSANIQFSVYGPPSSQPCNPVYTYSPQCPEPPCQSDMDLQGQTRGS
MGITTGIKRPRMGPGARVKGQDELCVVCGDKASGYHYNALTCEGCKGFFRRSVTKKAVYR
CKSGGGCEMDMYMRRKCQDCRLRKCRAVGMLAECLLTEVQCQSKRLRKGTKHRGDSLSAL
ATEDEESNESRNVSSTSRVPAPARVALGLSREQKYVLNRIVEAYRWFRGQDAIQCRVPQW
LCLEDGIDFLTPLETERLLQFSKSIPGFEQLDNADQSILLSSSSVEVMFLLSAQRFGENP
SQYSAGLYPVSGSNISYDWMKTSQSKTSSHETLLNSGMGEEILRPMLNFFHSMAAIAVTE
AEYALLVATAVLCSADRLSLPAASCVENLQEFILELLSKVCRNGQGSNLGPCRFARLLGR
LTELRTLHHNHLTLLPQQIWDMQH
NT seq
1515 nt
NT seq
+upstream
nt +downstream
nt
atgtacgggaaggcaaatcaagaggatattggaagagtaaacgctgaaaacatcagagct
gcagcaaaaatgagggagtggatggactctgagatgagcctgactgctggtagttacctc
tctggaggagaaacctacagcatcgcagaaccacagtactacgatgtgctggtggaccag
gactttgatctacaggcttttccctacagccaacagcactatagctcagccaacattcag
ttctctgtgtacggaccccccagctctcagccgtgtaaccccgtatacacatacagccca
caatgtccggaaccaccatgccaatcagacatggacctgcaaggacagacgagaggcagc
atgggcattacgacaggcataaagagacccagaatgggacctggagctagggtcaagggt
caggatgaactgtgtgtggtgtgtggggacaaagcttcaggatatcactacaatgctctg
acctgtgaaggctgcaaaggcttttttaggcgcagtgtaaccaaaaaggctgtttaccgc
tgtaaaagtggtggtggatgtgagatggacatgtacatgcgtcgcaagtgccaggactgt
cgactgcgcaagtgtagagccgtgggcatgttagccgagtgtctactgaccgaggtgcaa
tgccagtcgaagaggttgcgaaagggcacaaagcacagaggagactcactttcagcactt
gctacagaggatgaggagagcaacgaaagcagaaatgtttcctctaccagcagagtacct
gcaccagcacgggtggctctgggattgtcaagagagcagaaatacgtcctgaacagaatt
gtagaagcttatcgttggttcagaggtcaggacgcaatacagtgcagggtgccccagtgg
ttgtgcttagaagacggtatagatttcctgacccctctagagacagaaaggcttctgcag
ttctcaaaaagcataccagggtttgagcagttggacaatgctgaccagagcattcttctc
tccagctcttctgtggaggtcatgttcctgctgtcagctcaacggtttggtgaaaatcca
tcccagtacagtgcaggtctgtatcctgtaagtgggtccaacattagttatgactggatg
aaaacctcacaatccaagaccagcagccatgaaactctactaaactcagggatgggtgag
gagatcttgaggccaatgctaaatttctttcatagtatggcagccatcgctgtgacggag
gctgaatatgctctgctggttgctaccgcggtactctgctcagcagaccggctgtctttg
cctgcagcgagctgtgtagagaacctgcaggagttcattctggagcttctctccaaggtg
tgcaggaacggtcagggttcaaatctcgggccatgtcgctttgctaggctgcttggtcga
ctaaccgagctgaggacgctacaccataatcacctcacactcctaccacagcagatctgg
gatatgcaacattga
DBGET
integrated database retrieval system
