Trichomycterus rosablanca: 134318331
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Entry
134318331 CDS
T09921
Name
(RefSeq) DDB1- and CUL4-associated factor 1 isoform X1
KO
K11789
DDB1- and CUL4-associated factor 1 [EC:
2.7.11.1
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
trn01001
]
134318331
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134318331
Enzymes [BR:
trn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
134318331
Protein kinases [BR:
trn01001
]
Serine/threonine kinases: Other
Other
134318331
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
134318331
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
Beta-prop_EML_2
WD40_CDC20-Fz
EIF3I
WD40
LisH
Beta-prop_WDR19_1st
ANAPC4_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_RIG_2nd
Motif
Other DBs
NCBI-GeneID:
134318331
NCBI-ProteinID:
XP_062855262
LinkDB
All DBs
Position
7:complement(27391010..27435246)
Genome browser
AA seq
1532 aa
AA seq
DB search
MASAIEGSVDSKAELTALLEQWEREQQGSTQELVNILTKISELVERETEEYHKADPDPFD
DRHPGRADPESMLGHLLKILFKNDDFMNALVNSYVMTSREVPLNTAACRLLLNIMPGLET
AVVFQEKEGIVERLFKWAQEAEEPLRIYATGLLAGAMENQDIAANYREENSVLVPLMLQR
LRELQQKDAESRKDFKRPSPRKSMEPMLPLDEEAVDGEFSSSPHVHAENNSFGHELDLAI
SPEPCSVQKSSGRASSVVKGVMKPAAALQSEPENSAAVVKDWKKRVEHENSRKAKQKLNF
SLPEPERSFSELSNSSWSEMSPWVIGNNYHLYPLTSGIEQRLILQYLTPLGEYQELLAVF
MQLGARELLMHYMDLKQTNDVQLTFEALKYLASLLLHKKFAAEFVAHGGVQKLLEIPRPS
MAATGVSLCLYYLAYNQDAMERVCMLPHSLLAEVVSYTLWLLECSHASGCCHATMFFSIC
FSFRAVLSLFDNQDGLRRLVNLISTLEILNPEDQGALLSDDEIFSSRQTAKHTCMALRRY
FEAHLAIKVEQVKQSLQRTEGGAPIHPQPYYKPCSYTRDQVVEMVEFLIEYAPVRLYWEP
AEVFHKLSCVQLLLQLISIACDWRTYYGRSDTVRYALDILSILTVIPKTQLLLAENVAVL
DEGGSTISTVGMSIVLMVAEGEMFVNDAEIQKSALQVVINCVCAPDKRVSSIGKFISGTP
RRRLPQSHRSSESVLAKMWNVVQSNNGIKVLLSLLTIKMPITDADQIRALACKALVGLAR
SATVRQIISKLPLFSSGQIQQLMKEPVLQDKRSEHVRFCKYAAELIEQISGKPLLIGTDV
SLARLQRANVVAQSRITFPEKELLLLIRNHLLSKGLTDTAAALTKEAELPMSIHLHSHTH
SSVAPFSPSVSTPPSPAPIPRTPRLANGVASRFGSHAPHVPTPPLHPQPRPSTSQPQPLA
TTTSHNSNGSSLIGRIVFSRERPSPCTMGAKKPRVLRQKSDHGAFSQSPAMKKQLDRHLP
SPPALDSIITEYLREQHARCKNPVTTCPPFSLFTPHQCPEPKQRRQAPTNFTARHMHRVV
YPKYGGVDGGCFDRHLIFSRFRPITLFKEAEEDESGFMCCAFSARERFLMLGTCTGQLKL
YNVFSGQEEASYSCHSSAITHLEPSRDGSLLLTSASWSYPLSALWGMKSVFIMKHSFLDD
HYVEFSKLSQDRVIGTKDHVAHIYDIQTGQRTLTLNNPDLANNYKRNCATFNPTDDLVLN
DGVLWDVRSALAIHKFDKFNMNISGVFHPNGLEVIINTEIWDLRTFHLLHTVPALDQCRT
VFNNNGTVIYGAMLQADDEDDMMEQQMKSPFGSSFRTFDATNYKPIATIDVKRNIFDLCT
DTKDCYLAVIENQDSINMDTVCRLYEVGRQRLAEEEEDEEDQEDEDQEEEEDDDDSDDID
DIDTDPLLAELENENNEEEDGDQDFSPSDDDEVAHLLEEDGEDEDDDDDDDDDDDDEEDS
DDNDGDVELMIGNTDSSDNSDLEDDIILSLNE
NT seq
4599 nt
NT seq
+upstream
nt +downstream
nt
atggcgtctgccatcgagggcagcgtggactctaaagcagagctgactgctctgctggag
cagtgggaacgagaacaacaaggcagcactcaggaactggtcaacattttgaccaaaata
tctgaacttgttgaaagagagactgaggagtatcacaaagctgatcctgacccatttgat
gaccgccacccaggacgggcagacccagaaagcatgctgggacatttattgaagatcctg
tttaagaatgatgacttcatgaatgcgttggtgaactcatatgtcatgacgagtagagaa
gttcctctgaacactgcagcatgtagactgctgctaaatatcatgcctggcctggagact
gcggtggtttttcaggaaaaggagggaattgtagagcgcttgtttaaatgggcccaggag
gctgaggagcccttgaggatctatgctacaggtctgctcgctggagccatggagaaccaa
gacattgctgccaactaccgggaggagaattctgtgctggttcctttaatgcttcaaagg
ctgcgcgagctccaacaaaaagatgccgaaagccggaaggactttaagcggcctagtcca
cgcaagagcatggaaccaatgctccctctggatgaggaagcagtggatggtgagttttca
tccagccctcatgttcatgctgagaacaacagctttgggcacgaattggatttagccatc
tcccctgagccctgttcagtccagaagagcagtggccgagccagctctgttgtcaaaggc
gtgatgaaaccagctgcagcactccagtctgagccagaaaactctgctgcggtagttaaa
gattggaagaagagggtggagcacgagaacagcagaaaggctaaacagaaactaaacttc
tcattgccggaacctgaacgcagcttcagtgagttgtccaatagcagctggtcggagatg
agtccatgggtgattgggaacaattaccacctttacccactcacgtcgggcatcgagcag
cgcctcattctgcagtacctgacgccacttggggagtaccaagagcttttggcagtgttc
atgcagcttggcgcacgggaacttctcatgcattacatggacttaaagcagactaatgat
gttcagcttacctttgaggccctgaagtaccttgcctctctgctgctgcataaaaagttt
gcagcagaatttgtggctcatggtggagtacaaaagcttttggaaattcctcggccctcc
atggccgctacaggagtttccctgtgtctttattatttagcctacaaccaagatgccatg
gagagggtctgtatgctaccccactcactgttggcagaggtggtgagttacactctgtgg
ctgctggaatgttctcatgcctctggctgctgccacgctactatgtttttctccatttgc
ttctcattccgagctgtgctttcactcttcgacaaccaggatggcctaagacgccttgtt
aacctgataagcactctggagattctaaatccagaggatcagggggcattgctgagtgat
gatgagatcttctccagcaggcagacagccaaacacacatgcatggccctgcggcgttat
tttgaggcccaccttgctattaaagtggagcaagtaaaacagagtctgcagcgcactgag
ggaggcgctcccatccacccacagccttactacaagccgtgctcctacactcgcgatcag
gtggttgaaatggtggagttccttattgagtatgccccggtacgcctgtactgggagcct
gctgaggttttccacaaactgtcttgtgtacagcttctgttgcaactcatttccattgcc
tgtgattggagaacatactatggcaggagtgacactgtgcggtatgcactggatatcctc
agcattctgactgttatcccaaaaactcagcttttgttggctgaaaatgtggcagtactg
gatgagggcgggtctaccatctccacagtgggtatgagcattgtgctgatggtagctgag
ggtgagatgtttgttaatgatgcagagatccagaagtcagcactgcaggtggtgatcaac
tgtgtctgcgctcctgacaagcgtgtctctagcattgggaaatttatttctggaacacct
cgtcgccgcctgccccagagtcaccgctccagtgaaagtgtcctggccaaaatgtggaat
gttgtccagtcaaacaatggcatcaaagtccttctctccctgcttacaattaaaatgccc
atcaccgatgctgaccaaatccgtgctttagcttgtaaagcacttgtggggttggcacga
agtgccactgtgcgacagatcataagcaagttgccgctcttcagcagcggacagatccaa
caactaatgaaagaacctgtgcttcaggacaagcgcagcgagcatgtgcgcttttgcaag
tatgccgctgagctgatagagcaaatatccggaaagcccttgttaattggcacggatgtt
tcactagcacgactgcagcgggcaaatgttgtagctcaatcacgtattacattcccagag
aaggagttgctgcttctcattcggaatcatctgctgtcaaaaggtctcactgatactgct
gcggcattaacgaaagaggcagaattacctatgagcattcatttgcattcacacacacat
tctagcgtagcaccattttcaccctctgtgtccacgcctccctcgccggctcccattcca
cggactcctagacttgccaatggggtggcatcgcgatttggtagccatgcccctcatgtg
ccaacccctcctcttcacccacagccccgcccttctacctcacaaccccaaccactggcc
actaccacatctcataatagcaatggctcttctctgattggtcgaatcgtgttctctagg
gagcggccctccccctgtaccatgggagcaaaaaagccaagagttctgaggcaaaaatcg
gaccatggggcatttagccagagtccagccatgaagaaacagttggaccgtcatcttcct
tcacctccggctcttgatagtattattacagagtacctgagggagcagcatgcccgctgt
aagaacccggttaccacatgcccccccttcagtctttttacaccccaccagtgcccagag
ccaaagcagaggcgccaggcacctacaaactttactgcacgacacatgcacagagttgtg
tatccgaaatatgggggagtggatggaggctgctttgacaggcatcttattttcagcagg
ttcaggcctatcacgctgtttaaggaagcagaggaggatgagagtggcttcatgtgctgt
gcattctcagcacgggagcgtttcctcatgctgggcacatgcacagggcagctaaaactc
tacaatgtgttcagtgggcaggaagaagctagctacagctgccacagctctgctatcaca
caccttgagccatccagggatggatctttactgttgacgtctgcttcatggagttatcct
ctatcagctctgtggggcatgaaatctgtcttcattatgaagcattcctttttagatgat
cattatgttgaattcagtaaactctcccaggacagagtgataggaacaaaggaccatgtt
gctcatatttatgacattcaaactgggcagagaacccttaccttgaacaatcctgacctg
gcaaacaactacaaacgaaactgcgccaccttcaatcccaccgatgatcttgtcttaaat
gatggggtactatgggatgtgcggtcagcactggcaatccacaagttcgacaaattcaac
atgaatatcagcggtgtttttcatcccaatggccttgaggtcattatcaacacagagatt
tgggacctaaggacatttcacttgctgcacacagtaccagcactggatcagtgtagaact
gtttttaacaacaatggaacagttatttatggagcaatgctgcaggctgatgatgaggat
gacatgatggagcagcagatgaagagtccctttggctcttcctttagaacctttgatgcc
actaattacaaacccatagctactattgatgtaaagaggaacatttttgacctctgtaca
gatacaaaagactgttaccttgcagtcattgaaaatcaagattctataaacatggacaca
gtatgccgtctttatgaagtaggtcgacagagacttgctgaggaggaagaggatgaggag
gatcaggaggatgaagatcaggaagaagaggaggatgatgatgactcggatgatatagat
gatatcgacacagaccccctcttagctgagctggagaatgaaaataatgaagaagaagat
ggtgatcaggatttttctccatctgatgatgatgaggtggctcacctgcttgaggaggat
ggtgaggacgaggatgacgatgatgatgatgacgacgacgatgatgacgaggaagattca
gatgataatgatggagatgtggagctgatgattggcaacacagatagctcggacaactca
gacctggaagatgacatcattctctctctaaatgaataa
DBGET
integrated database retrieval system
