Trichomycterus rosablanca: 134318373
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Entry
134318373 CDS
T09921
Symbol
rbm39b
Name
(RefSeq) RNA-binding protein 39b
KO
K13091
RNA-binding protein 23/39
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134318373 (rbm39b)
Spliceosome [BR:
trn03041
]
Common components
Common spliceosomal components
General mRNP proteins
134318373 (rbm39b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_occluded
RRM_5
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
134318373
NCBI-ProteinID:
XP_062855323
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All DBs
Position
7:33668428..33679126
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AA seq
497 aa
AA seq
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MADDFDIEAMLEAPYRKGDSKSSSANGHEEQSRKKRHSRSRSRSGGRHRSRSRERKKSKD
QRRSRSREKKKTHSKDRRRSRSRSHERHGRYRSHKSPNRKRSRSKSPLKKEKSPVRKPID
NLSAEERDARTVFCMQLAARIRPRDLEEFFSAVGKVRDVRMISDRNSRRSKGIAYIEFVD
TTSVPLAIGLTGQRLLGVPIIVQASQAEKNRAAAAAAASLQRGGAGPMRLYVGSLHFNIT
EDMLRGIFEPFGKIESIQLIMDSETGRSKGYGFISFADAECAKKAMEQLNGFELAGRPMK
VGHVTERTDGSAASSFLDNDELERTGIDLGTTGRLQLMARLAEGTGLQIPPAAKQALQMG
GAISFGSMPSVMPSPSMNQAMNLPTQPLATHCLQLSNMFSPQSENDPGWDIEIQDDVIEE
CNKHGGIIHIYVDKNSPQGNVYVKCPSIPTAMAAVSALHGRWFAGKMITAAYVPLPTYHN
LFPDSVTATQLLRPTRR
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgactttgatattgaggccatgctcgaagctccctacaggaagggtgacagc
aagtcttctagtgcaaatggccatgaagaacagagcaggaagaaaagacacagtcggagt
cgcagccggagtgggggtcgtcacaggagccggagcagagagcgcaagaaaagcaaggat
caacgaaggagccgcagccgcgagaagaagaaaacacacagcaaagaccgacgtcgttca
cgctctcgcagtcatgagaggcacggacgctatcgcagccacaaaagcccaaaccgcaaa
cgctctcgaagcaagagtccattaaagaaagagaagagtcctgtcaggaagccaattgat
aatttgagtgctgaggagagggacgctcgcacagtgttttgcatgcagcttgctgccaga
atcagacccagagacctagaggagttcttttctgctgtgggcaaagtgcgtgatgtgagg
atgatttcggacagaaactcgcgcaggtctaaaggcattgcctacatagagttcgtagac
acaacctctgtgcctctggctatcgggctgaccggacaaaggctgctcggagtgcccatt
atcgttcaggcctcacaggctgagaaaaacagggccgccgcagcagctgctgctagcctg
cagagaggtggtgcgggtcctatgcgcctgtatgtgggctctcttcactttaacatcact
gaggacatgcttcgagggatctttgaaccatttggaaagattgagagcatccagttgata
atggacagtgagactggaagatcaaaaggctatggctttatctcgtttgcagatgctgaa
tgtgccaaaaaggcaatggagcagctgaatggctttgaattggccggtcgtcctatgaag
gttggtcacgtgactgagcgcacagacggctcagccgccagctctttccttgacaacgat
gagctagagagaacaggcatcgacctgggcaccacaggccgtctgcagctgatggcccga
ctcgcagaaggtacagggctgcagattcctccagcggcaaagcaagctcttcagatgggt
ggcgctatttcatttgggagcatgccttcagtgatgcctagccccagcatgaaccaagct
atgaacctccccacacaacccctggccactcactgcctacagctctccaacatgttcagc
ccacagtcagaaaatgatcctggttgggatatagagattcaggacgatgtcatcgaagag
tgcaataaacacggaggcattatacacatatatgtagacaaaaactcgccgcagggtaac
gtgtatgtgaagtgtccgtccatccctactgccatggctgcggtcagtgctttacacggt
cgctggtttgcaggcaaaatgattacagctgcctatgttcccctgccaacctaccacaac
ctcttccctgattcagtcacagccacacagctgctgagacccacacgccggtga
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