Trichomycterus rosablanca: 134318398
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Entry
134318398 CDS
T09921
Symbol
pdlim2
Name
(RefSeq) PDZ and LIM domain protein 2
KO
K23353
PDZ and LIM domain protein 1/2/3/4
Organism
trn
Trichomycterus rosablanca
Pathway
trn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134318398 (pdlim2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
trn04990
]
134318398 (pdlim2)
Domain-containing proteins not elsewhere classified [BR:
trn04990
]
LIM domain-containing proteins
PDZ-LIM family proteins
134318398 (pdlim2)
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Motif
Pfam:
PDZ
DUF4749
PDZ_6
LIM
PDZ_2
DmmA-like_C
Motif
Other DBs
NCBI-GeneID:
134318398
NCBI-ProteinID:
XP_062855372
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Position
7:34833489..34908985
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AA seq
365 aa
AA seq
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MAFSVTLTGPSPWGFRISGGRDFKKALTVSKVNAGSKAEKAHLQPGDVILEINGDNTSDM
LNVEAQNKIKNSKTQLELLVERPVPSSPGQTNGISNTEQLVGRFQEAVQVRDENQNYRVY
SVSSPASISPGPYSPEPLSSPEVKGERITPTNRSLQHSSWSSEEKISSYRLSRPLSQDFS
PMDYRSNSVSSRTPTPPGRYSPLSPIDRDIPISPRRNSSDFAMQRFDRDSEVYKMIQENK
ESRAAPRQSNTFKMLQEVLEADENEAAIRFPGRLSPSPPKPDTSGGGVTKYHTCEKCGNN
IVTQAVRIIDGRFRHPECYTCSDCGLNLKMRGHFWVEEELFCEKHARQRYQGPGAGYRHP
ISPNN
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atggctttttcagtaaccctgactggcccgtccccctggggcttcagaatatctggtgga
cgtgacttcaaaaaggccttaacagtctcaaaggtaaatgctggcagtaaagccgaaaaa
gcccatctgcaacctggagacgtcattctagaaataaatggggacaacacaagcgacatg
ctgaacgtagaggcacagaacaaaatcaaaaactccaaaacacagctggagcttctcgta
gagaggccagttccttccagtcctggacagactaatggaatcagtaacacggaacaattg
gtgggccgtttccaggaggctgtgcaagtcagagatgagaaccagaactacagagtctac
tccgtctccagtccggcttctatttctccaggtccatactccccagaaccactatccagt
cctgaagtaaagggggaaaggatcacacccaccaacaggagcctgcagcacagttcctgg
tcttctgaagagaagattagcagctacagactgtcccgacctctttctcaggacttctcc
ccgatggattatcgcagcaactctgtgtccagtcgaaccccgacccctcccggacgctac
tcgccgctcagtcctattgaccgggacattccaatttctccacgccgtaacagctcagac
tttgcgatgcaacggttcgaccgggactctgaggtgtacaagatgattcaggagaataag
gagtcgcgtgcagctcctcgtcagtccaacaccttcaaaatgctgcaggaggtgctggag
gccgacgagaatgaggctgccatcaggtttccagggagactatcgccgagcccaccgaaa
cctgacacgtctggcggcggagtcacaaaatatcacacttgcgaaaaatgcggcaacaac
attgtcacccaggcagtacggatcatagacggtcgcttccgccaccctgaatgttacacg
tgctcagactgtggcctcaacctgaagatgcgtggtcacttctgggttgaagaggagcta
ttctgtgagaagcacgctcgccagcgctaccagggacccggagccggctaccgccacccc
atctcacctaataactga
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