Trichomycterus rosablanca: 134318466
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Entry
134318466 CDS
T09921
Symbol
hnf1a
Name
(RefSeq) hepatocyte nuclear factor 1-alpha
KO
K08036
transcription factor 1, hepatocyte nuclear factor 1-alpha
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134318466 (hnf1a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
134318466 (hnf1a)
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Gene cluster
GFIT
Motif
Pfam:
HNF-1B_C
HNF-1_N
HNF-1A_C
Homeodomain
Telethonin
HTH_37
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
134318466
NCBI-ProteinID:
XP_062855491
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Position
7:complement(39809646..39818827)
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AA seq
580 aa
AA seq
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MEGGEDGRMEGPVQRLSALQQQLLYSLLSSGLTRDVLIQAVSELERERSRAGTGTVENGA
GTESDRLEAADRTDGESSEDGESDSPPPIFREIEQLPPEEAARQRAEVEQLLQVDPWRVA
KVVKTYMQQHNLPQREVVESTGLNQSHLSQHLNKGTPMKNQKRAALYSWYIKKQDEISQQ
FTNASRGLVLGEEPGEEIRKGRRNRFKWGPASQQILFQAYERQKNPSKEEREGLVEECNR
AECLQRGVSPSQLAGLGSNLVTEVRVYNWFANRRKEEAFRHKLALDPPFSSQSASSMEQI
LPPTSTQALKFTSSLVCEGVGLVRAGGNGDRVDGGHLGPVPIQLEPSHTLLETHQHRTVP
GGGSLPPVSTLTSLHGVSYPHSGSPQGLIMASLPSVMSLGDSSVLIGLTSAQPQTVPLIN
NVGGGFTTLQPITFQQQLHAPNQQTITQQLPGHMGPSSFMATMAQLPCHMYSRTTDLTSY
PSSSLLSQAMVITDSNSIGTLANLTTVRHILSSDPEEHTDPPIQEESIHLQSCSPAPGSS
GSLDLYPQSQSSESHTSHLLVSSPGDIGPYIPTQMVSTAQ
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atggaaggaggagaagatggaaggatggaaggtccagtccaaaggctctcagctctgcag
cagcagttgctctactctctgctcagttctggtctgacccgagacgttctcatccaggcc
gtcagcgagctcgagagggagaggagccgagctggaacgggaaccgttgaaaatggggct
ggaacggaatcggatcgcttggaagcggccgatcggacggatggagagagttcagaggat
ggagagagtgactcccctccaccaatattcagagagatagagcaactcccgccggaggag
gcggcgcgacagagagccgaggtggaacaactgctgcaagtggacccgtggcgtgtagcg
aaggtggttaagacctacatgcagcagcataatcttcctcagcgggaggtggtggagtcg
accggcctcaatcagtctcacctgtctcagcacctgaataagggcacgcccatgaagaac
caaaaacgtgccgccctctacagctggtatatcaaaaaacaggacgagatcagccagcag
ttcaccaatgccagccgtgggttggttctcggcgaggaaccgggtgaggagatcagaaag
gggaggagaaatcggttcaaatggggtccagcgtcacagcagatcctgttccaggcttat
gaacgtcagaagaacccaagcaaggaggagagagaggggctggtggaggagtgtaaccga
gctgagtgtttgcagagaggagtgtctccgtctcagctggcaggtttgggttctaacctg
gtaacagaggttcgtgtgtataactggttcgctaatcggcgtaaagaagaagcttttcga
cacaaactggcactcgacccaccctttagcagccagtcagcctccagcatggagcagatc
ctcccacctacgtccacacaagctttaaagttcacttcgtctttagtgtgcgagggtgta
gggttagttcgagctggtggaaatggagacagggtcgacggcggtcacttaggaccggtt
ccgatccaactggagccgagccacacgctgctggaaacacatcagcacaggacggtacca
ggaggaggttctcttcccccagtcagcaccctcacctctctgcatggcgtatcctaccca
cactctggatcacctcagggtctcatcatggcctcattacccagcgtcatgagtctggga
gactcatctgtactcataggtcttacatccgctcagccacagacggttccccttatcaac
aacgttgggggcggatttaccacgctccagccaatcaccttccagcaacagctccatgcc
cccaatcagcaaacaatcacacagcagctgccgggtcacatgggtcccagttccttcatg
gcaacgatggcacagctgccctgccacatgtacagcagaacaacagacctgacctcgtac
ccatcctccagtctcctgtctcaggccatggtcatcaccgacagcaacagcataggaacg
ctagctaatctcaccacggtccgacatattctgagctcagatcctgaggaacacactgat
ccacccatccaggaggaatcgatccacctacagtcctgctctccagcgccagggtcctcg
ggtagtttggacctgtatcctcaatcccagtccagcgaatctcacacctctcacctgctc
gtctcatcaccaggagacatcggcccctacattcctacacagatggtttctactgctcag
taa
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