Trichomycterus rosablanca: 134318471
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Entry
134318471 CDS
T09921
Symbol
hcfc1b
Name
(RefSeq) host cell factor 1b
KO
K14966
host cell factor 1
Organism
trn
Trichomycterus rosablanca
Pathway
trn03083
Polycomb repressive complex
trn04980
Cobalamin transport and metabolism
trn05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
134318471 (hcfc1b)
09150 Organismal Systems
09154 Digestive system
04980 Cobalamin transport and metabolism
134318471 (hcfc1b)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
134318471 (hcfc1b)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
trn01009
]
134318471 (hcfc1b)
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134318471 (hcfc1b)
03029 Mitochondrial biogenesis [BR:
trn03029
]
134318471 (hcfc1b)
Protein phosphatases and associated proteins [BR:
trn01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
134318471 (hcfc1b)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
NSL complex
134318471 (hcfc1b)
HMT complexes
COMPASS/SET1 complex
134318471 (hcfc1b)
MLL-HCF complex
134318471 (hcfc1b)
Polycomb repressive complex (PRC) and associated proteins
PR-DUB complex
134318471 (hcfc1b)
Mitochondrial biogenesis [BR:
trn03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
134318471 (hcfc1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Kelch_3
Kelch_5
Kelch_4
Kelch_1
Kelch_6
fn3
Motif
Other DBs
NCBI-GeneID:
134318471
NCBI-ProteinID:
XP_062855503
LinkDB
All DBs
Position
7:complement(40457269..40478440)
Genome browser
AA seq
1863 aa
AA seq
DB search
MASSVTSAASGSVLQPRWKRVLGWSGPVPRPRHGHRAVAIKELMVVFGGGNEGIVDELHV
YNTATNQWFIPAVRGDIPPGCAAYGFVCDGTRLLVFGGMVEYGKYSNDLYELQASRWEWK
RLKPKAPKNGPPPCPRLGHSFSLVGNKCYLFGGLANDSEDPKNNIPRYLNDLYTLELRPG
SNVVGWDVPITYGVLPPPRESHTAVVYTEKTSKKSRLVIYGGMSGCRLGDLWTLDIDTLT
WQKPAISGTAPLPRSLHSATTISNKMFVFGGWVPLVMDDVKVATHEKEWKCTNTLACLNL
DSMTWETILMDTLEDNIPRARAGHCSVAINSRLYVWSGRDGYRKAWNNQVCCKDLWYLET
DRPVAPSRVQLVRANTNSLEVSWGTVPTADLYLLQLQKYDIPAATAASSPGVTPISSLPT
NSPRSPVPAAAAPASQSMPITGLTLIPQLPSPTTSMPGSPLAAASPRGPAILKVAAPQAT
PGTSIVTVRQANQVGKSPVTVTSLPAGVRMVVPVQSAHGTPIGSSPQMSGMAALAAAAAA
TQKIPPSSAATMLNVPAGATMVKTLAVTSGSAALPGTLKVASPVTISNSATRMLKTAAAQ
ASTISTPNTPTRPIITVHKSGTVTVAQQAQVVTTVVGGVTKTITLVKSPLTMGSGGTLLS
SLGKVMTMVQTKPVQSSAVTGQAGSPLTQIIQTKGPLPAGTILKLVTSADGKPTTIITTT
QSGATGTKPTILNISGVSPTSANKPGTTIIKTIPMSALQQGTAGAGATGLKSPITLITTK
MMTSGTGTPGKIITAVPKLTTGAGQQGLTQVVLKGAPGQPGTILRTVPMSGVRLVSPGTV
SGVKPTVTTLVVKGTTGVTTLGTVTGSNTTSLAGANVATPNATLATSINTLGTISTLSSQ
VLNPTAITVSPAQTNMTTVPTVAIQAAAQPTQVTLISTPSGVEAQQDLPVSILASPTSEQ
PSATGVESGEAPTEVTLVCSNPPCETHETGTTNTATTASARIGTERVCSNPPCETHVTGT
TNTTTTASSGMGRVQQVCSNPPCETHETGTTNTSTQASSSMGGGTTNSVQRVCSNPPCET
HETGTANTPTQASSSMGGGTTSTVQRVCSNPPCETHETGTTNTPTQASSSMGGGTTSTVQ
RVCSNPPCETHETGTTNTPTQASSSMGGGTTSTVQRVCSNPPCETHETGTTNTPTQASSS
MGSDTTNTVQRVCSNPPCETHETGTTNTATQASSTMGAGQNGMVQRVCSNPPCETHETGT
TNTATTATSSLESGEGAAQQSGTEDSGTSAEATSSTEPANPTLQSRAITTVTQATPTPGP
SVPEISSMAVSVAVVEGSGEAEAMEQGDSEAVAVGDEPMQTEGVLGVGVVAVGEGAAGEA
AAMLQVHVAMEAQPGLGEQAEMEQGGEGAEAVALAGQDSEALALPQELMAAEAQQTTLMV
TGLTPEELAVTAAAEAAAQAAATEEAQALAIQAVLQAAQQAVLNEGDGGHVGQHTTTIPI
VLTQQELAALVQQQQQLQEVQAAAVAAAQQLAADAAAAALPTEGLAPADSLNDPTMESNG
HELAAAAVAGAVAQLLPSTSAETLAPSSTLAPSQPMVVASPAKMQAATALAEVANGIESA
AGKPGIPAAVAKPPVKKENQWFDVGAVKVTNMVVTHYYVPPDDSEVTDDDSGNVPDYNQM
KKVELSPGTAYKFRVAGINTCGRGTFSEVSAFKTCLPGFPGAPCAIKISKSPDGAHLTWE
PPSVTSGKIIEYSVYLAIQSSQTTEAKASAPAQLAFLRVSCGPSPSCLVCPNILAKAHID
YTTKPAIIFRIAARNEKGYGPATQVRWLQETSKDGSAAKPAAKRPVPSPDVKGIGPKKAR
ADQ
NT seq
5592 nt
NT seq
+upstream
nt +downstream
nt
atggcttcatctgttacatcagcggcttcaggctcggtcctccagcccagatggaagcga
gtgctgggctggtcgggcccggtccctcgtcctcggcacggacaccgagccgtggccatc
aaggagctgatggtggtgttcgggggtggaaacgaaggaatagtggacgagctgcacgtc
tacaatacagcaaccaatcagtggtttatcccagccgtccggggcgatataccccccggc
tgtgccgcgtacggatttgtgtgtgatggcactcgactgctcgtgtttggcggaatggtc
gaatatgggaaatacagcaacgatctctatgaactacaggccagcagatgggagtggaaa
cggctgaaacctaaagctccgaagaacggccctcctccgtgtccgcgcctgggccacagc
ttctcactcgtgggaaacaaatgctacctgtttggtggactcgcaaatgacagcgaggat
cccaaaaacaatattccaagatacctgaatgatctgtacacgctcgaactgcgtcccggc
tccaacgtggtgggctgggacgtccccatcacgtacggcgtgctgccccctccccgcgag
agccacaccgccgtggtctacacggagaaaacctccaagaagtcccgcctcgtcatctac
ggtggcatgagcggctgccgcctgggagacctctggacactagatatagataccctgact
tggcagaagccggccatcagtggcacagcgccccttcctcgcagtcttcactctgccacc
acgatttctaacaagatgttcgtatttggcggttgggtgcccttggtcatggatgatgtg
aaagtggctacacatgaaaaagaatggaagtgtacgaacacactggcatgcctcaatctc
gactcgatgacatgggagaccattttgatggacaccctggaagacaatatccccagagcc
agggcggggcactgctctgtcgccatcaactcccggctgtacgtgtggagcggcagggac
ggctaccgcaaagcctggaacaaccaagtgtgctgtaaagacctctggtatctggagacg
gatcgtcccgtggcgccgtcccgcgtgcagctggtccgagccaacaccaactccctggag
gtgagctggggcaccgtgcccactgccgacctgtacctgctgcagctgcagaaatacgac
atcccggcagccaccgccgcctcgtcccccggcgtcactcccatctcctctctgcccacc
aactcgcccaggagcccggtcccggcggccgccgcgcccgcctcccagagcatgcccatc
acaggactgacgcttataccccagctgccctcgccgaccacctccatgcccggcagcccg
ctagctgcagcctcgccacgtggcccggctattctgaaagtagctgcacctcaggccaca
cctgggacgtccatcgtgaccgtgcgtcaggccaatcaggtggggaaatccccagtaacg
gtgacgtcactcccggccggagtgcgcatggtcgtccctgtacagagcgcccatggcacg
ccgatcgggagcagccctcagatgagcggcatggccgccctggctgccgccgcggccgcc
acgcagaagatccctccctcttccgcggcgaccatgctgaacgtcccggcaggagccacc
atggtaaaaacgttagctgtgacttcagggtccgcagctctgccgggtacattgaaagtc
gcctcgccggtgacgattagcaattcggctacgcgcatgctaaagacggccgccgcccag
gcgtcgaccatctctacgcccaacacgccgacacgccccatcatcactgtgcacaagtct
ggaacggtgaccgtggcccagcaggcccaggtggtcaccacggtggtcggaggggtcacc
aagaccatcaccctcgtaaagagcccgctcactatgggcagcggtggcactctgctctct
agcctggggaaggtaatgaccatggtccagaccaaaccagtacagagctctgcagtgact
ggccaagccggcagccccctcactcagatcatacagacgaaaggtcctctgcctgcaggc
actatcctcaagctggtcacctccgcagacggtaaacccaccaccatcatcacgaccaca
cagtcaggtgccactggcaccaaacccactatactgaacatcagcggagtctcgcctacg
tctgctaacaagcccggcactaccatcattaagaccatccccatgtctgctcttcagcaa
ggaactgcaggtgctggtgctactggtctaaagtctcccatcactttaatcaccaccaag
atgatgacgtctggaacaggtacaccagggaaaatcatcacagcagtaccgaaactgacc
acaggagctggacagcaaggattgactcaggtggtcctgaagggggcgccagggcagccc
ggcactattctgcgcacggttcccatgagtggcgtccgcctggtctctccgggtaccgtg
tctggggtgaaacccacagtcaccacactagtggttaaaggcaccacaggagtaactact
cttggcaccgtgaccggctccaacaccaccagcctggcaggagccaatgtcgccactcct
aatgccactctggctacttccatcaacaccctgggtacaatctctacgctttctagtcag
gtgcttaatcccacagctatcacagtttctccggcccagaccaacatgaccactgtaccc
accgtggccattcaggcagctgcacagcccactcaggtgaccctgattagcacccctagt
ggtgtagaggcccagcaggacctccccgtctccattctggcctcccccacctccgaacaa
ccctccgccaccggagtcgaatccggcgaggcgccaaccgaagtgactttggtctgctcc
aaccccccatgcgagacccacgaaaccggtaccaccaacacggccaccacggcgtccgcc
aggatcggcacggagcgcgtgtgttctaacccaccctgcgagacgcacgtgaccggaacc
acgaacacgacgaccacggcctcgtccggcatgggccgcgtgcagcaggtgtgcagcaac
ccgccgtgcgagacccacgagacgggcaccaccaacacgtccacgcaggcgtcctcgagc
atgggcggcggcaccaccaattcggtacagagagtctgttccaacccgccgtgcgagacc
cacgagacgggcaccgccaacacgcccacgcaggcgtcctcgagcatgggcggcggcacc
accagcaccgtccagcgagtctgttccaaccctccgtgcgagacccacgagaccggcacc
accaacacgcccacgcaggcgtcctcgagcatgggcggcggcaccaccagcaccgtccag
cgagtctgttccaaccctccgtgcgagacccacgagaccggcaccaccaacacgcccacg
caggcgtcctcgagcatgggcggcggcaccaccagcaccgtccagcgagtctgttccaac
cctccgtgcgagacccacgagacgggcaccaccaacacgcccacgcaggcgtcctcgagc
atgggtagcgacacaacaaacactgtacagagagtctgttccaacccaccgtgcgagacc
cacgagaccggcaccaccaacactgctacacaggcttcgtccactatgggagccggacag
aacggcatggtgcaaagagtgtgttccaatccgccctgcgagacccacgaaacgggcacc
acaaacacggccaccaccgccaccagcagcctagagtcaggggagggcgcagctcaacag
agcggcaccgaagacagcggcaccagcgccgaggccacttcgtctacggaacctgccaat
ccaacgcttcagagcagagccatcaccacggtaacacaggccacgcctaccccaggaccc
tccgtcccagagatctcatccatggccgtctccgtcgccgtggtcgagggctccggcgag
gccgaggcgatggagcagggagactcggaggcggtggcggtcggcgacgagcccatgcag
acggaaggagtgctgggtgtaggagtcgtcgccgtcggagagggcgccgccggcgaggcg
gctgccatgctgcaggttcacgttgccatggaggcgcagcccggactgggcgagcaggct
gagatggagcagggtggagagggcgcggaagccgtggcactggcaggccaggactccgag
gccttggcactgcctcaggagctgatggcagccgaagcacagcagaccacactaatggtg
accggtctgaccccggaggagctggccgtaaccgccgcggcagaggctgctgctcaggcc
gcggccacagaggaggcccaggccctcgccatacaggctgtgctccaggcagcccaacag
gctgtactcaacgaaggagatgggggacacgtcggccagcacaccacgaccatccctatc
gtgttgacgcaacaggagctggccgctctcgtccagcagcagcagcagctccaggaggtc
caagcggccgccgtggccgccgcacaacagctggcggccgatgccgcggcggccgccctg
cccaccgagggcctggcccctgctgacagtctgaacgaccccacgatggagagcaacggt
cacgaactggccgccgccgcggtggccggagccgtggctcaactcctgcccagcacttct
gctgaaactttggctccgtcgagtacgctcgccccgtcccagcccatggtggtggccagt
cccgccaagatgcaggcagccacagcgctcgctgaggtggccaatggcatcgagtctgca
gccgggaaacctggaattcctgctgcagtggccaaaccaccggtgaagaaagagaatcag
tggtttgatgtcggagcggtaaaagtgaccaacatggtggtcacacattattacgttccg
cctgatgattcagaggttacagatgacgattccggtaacgtcccggactacaatcagatg
aagaaagtggagctctctcccggcacggcgtacaagttccgcgtggccgggatcaacacg
tgcggccgcgggacgttttccgaagtgtccgcgttcaagacctgtctacccggcttcccc
ggtgcgccgtgtgccattaaaatcagcaagagccccgacggcgctcacctcacctgggaa
ccaccgtctgtcacgtcggggaagatcatcgagtactccgtctacctggccatacagagt
tctcagacgacggaggccaaagcgtctgcgccggctcagctggctttcctgcgcgtgagc
tgcgggcccagcccgtcctgcctggtctgccccaatatcttggccaaagctcacatcgac
tacaccaccaaacccgccatcatcttccgcatcgccgcccgcaacgagaagggctacggc
cccgccacgcaagtcaggtggctgcaagaaaccagtaaagacggatctgccgcgaaacct
gcggcgaagagaccagtcccgtctcctgatgtgaaaggtatcggtccaaaaaaggccaga
gccgaccagtga
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