Trichomycterus rosablanca: 134318478
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Entry
134318478 CDS
T09921
Symbol
sin3b
Name
(RefSeq) paired amphipathic helix protein Sin3b isoform X1
KO
K23213
paired amphipathic helix protein Sin3b
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134318478 (sin3b)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
REST complex
134318478 (sin3b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sin3a_C
PAH
Sin3_corepress
PAH_ZNF598
mTOR_dom
DUF5760
Motif
Other DBs
NCBI-GeneID:
134318478
NCBI-ProteinID:
XP_062855516
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All DBs
Position
7:complement(41107038..41133284)
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AA seq
1217 aa
AA seq
DB search
MAKIQSHNSSSTTTKHPLSPLQEKAFTPLKHQQHFQKLKVEDALSYLDQVKIRFANDPGI
YNKFLDIMKEFKSQSIDTPGVINRVSQLFHGHPDLVLGFNAFLPPGYRIEIPKNGMAFLQ
SPFTAQQVSPGKAKSAESSSAPSETVASPQSVSSSSGAPEPPTRLALPLPSQSQPATASS
SSPPASEASPVEFDSAISYVNKIKSRFLDHPEIYRSFLEILHTYQKEQLELKENKSRTSA
GMTEDEVFSKVASLFKGQEDLLAEFGQFLPDAKRSLFTGGSLTGKDPMKKPEEDELNKHT
KKRPRPLLMPHMTPLFKKKMKFSCSKDQSFASVGKHGVLREFTFFDKVRRLFKSQEVYEN
FLRCIALFNQEVVSGAELLQLVTPFLGKFPELYSQFKSFLGEKELSHSVSGLSERYMEGG
GARDVDYASCKRLGSSYRALPKTYQQPKCSGRTALCKEVLNDTWVSFPSWSEDSTFVSSK
KTPYEEQLHRCEDERFELDVVLETNLATIRVLESVQKKLTRLSPEDQDRFRLDDCLGGTS
EVIQRRAVYRIYGDKAPEIIEGLKKNPATAVPVVLKRLKAKEEEWRDAQQGFNKIWREQY
EKAYLKSLDHQGVNFKQNDMKALRSKSLLNEIESIYDERQEQSTEEGGVGQQGREGAAPA
SEPHLIFTYKDKQILEDAASLIIYHVKRQPTIHKEDKDQIKRIIHHFLPDLFFARRGELS
ETEEWTDEEAEAEDGVAAVAAAAMAAMTAAAATTGAQPEGTTEPPLPPPPPTTPGATEGG
ATEGGATPSGTPANPQHLNGESKRKRCPSPHSAEQQEQLDLQKEQDGVYNLFFVNNNWYF
FLRLHQTLCSRLLRVYRQAERQLLEHRAEQSAERLLVAEGRRDKATDLAMELRLKQPSEV
ELEEYYPAFLDMVRSLLDGNLDSIQYEDTLREMFTIHAYIGFTIDKVIQNIVRQLQHLVS
DEVCVQVAELYSCERRRGATGGNLSSQCVRTAWETSYQWKAERVMTEENCFKVMFIQNKG
EVTMTVELLDTEEAQADDPLDVQCLSNYMEQFVGAESASCTQAEGCYFKPVFLPRNLRQF
RRWQLKQVEALRCRRELRDQLGVESAGNLDCRFKLNTHKMVFVMNSEDYMYRRGALHKAK
KSHSRVVRQQHERFSRWHSTWQSVHVAGAAARSVRSWLLGENPDDLLPCKTTCVTSQVKG
QTVNRYQVHYSKAPASP
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagatccagtctcacaacagcagcagcaccaccaccaaacacccgctcagcccg
ctccaggagaaagccttcacccctctcaaacaccagcagcacttccaaaagctcaaggtg
gaagatgcgctgtcgtacctggatcaggttaaaatccgctttgccaacgatcctgggatt
tacaacaagttcctggacataatgaaggagtttaagtctcagagtattgatacgccaggc
gtgatcaatcgagtgtctcagctgttccacggtcacccggatctcgtgctgggcttcaac
gccttcctgcccccgggctatcggatagaaatccccaaaaatgggatggccttcctccag
tcgcctttcactgcacagcaggtttctccaggtaaagccaagagcgccgagtcgagttcc
gcccccagcgagaccgtggcgtctcctcagagcgtctcctcgtcgtcaggagccccagaa
cctcccaccagactcgccctgcccctgcccagccagtcgcagcccgccaccgcctcctcg
tcgtcgccgcccgcctcagaagcgagtcctgtagagttcgacagcgccatcagctacgta
aacaagatcaaaagcaggtttctggaccatcctgagatctacaggtcgttcctggagatc
ctgcacacttatcagaaggagcagctggagctgaaggagaacaagagcagaacgagtgct
gggatgacggaggacgaggttttctctaaagtggccagtctcttcaagggacaggaggac
ctgctcgccgagtttggacagttccttcccgacgccaaaagatcactgtttactggagga
tctttgaccggaaaggacccgatgaagaagcccgaggaggacgagctgaacaaacacacc
aagaagagaccacgcccacttctcatgcctcacatgacacctttgttcaagaagaagatg
aagttttcctgctccaaagatcagtccttcgcctcggtggggaaacacggagtccttcgc
gagttcacgttcttcgataaggttcggcgtctgttcaagagtcaggaggtgtacgagaac
ttcctgcgctgcatcgccctgttcaaccaggaggtggtgtcgggggcggagcttctgcag
ctggtcacgcccttcctcgggaagttcccggagctgtactctcagttcaagtccttcctg
ggggagaaggagctctctcactccgtctcgggtctgtcggagcgctacatggaggggggc
ggggccagggatgtggactacgcctcctgtaagcgactcggctccagttacagagccctg
cccaaaacgtaccagcaacccaaatgtagcggcagaaccgcgctgtgtaaagaggtgctg
aacgacacctgggtgtctttcccgtcgtggtcggaggactccacgttcgtcagctccaag
aagacgccgtacgaggagcagctccatcgctgtgaggacgagaggttcgagctggacgtg
gttctggagaccaacctggccaccatcagggttttggagagcgtgcagaagaaactgacc
cgcctctcgccggaggaccaagaccgcttccgattggacgactgcctcggcgggacctcc
gaggtcatccagcggcgtgccgtgtaccgtatctacggcgacaaagctccggagatcatc
gaggggctgaagaagaacccggctaccgccgttcccgtggtgctgaagagactgaaggcc
aaagaggaggagtggagagatgctcagcagggcttcaataagatctggagggagcagtac
gagaaagcctacctcaaatctctggaccatcagggcgtcaacttcaaacagaacgacatg
aaggctctgaggtccaagagtctgctgaacgagatcgagagcatctacgatgagcgtcag
gagcagagcacggaggagggcggcgtgggtcagcagggtcgcgaaggagccgcgcccgca
agcgaacctcacctgatcttcacctacaaggacaaacagatcctggaggacgccgcgtcc
ctcatcatctaccacgtcaagcgccagccgaccatccacaaggaggacaaggaccagatc
aagcgcatcatccaccacttcctcccggacctcttcttcgcccgccggggggagctgagc
gagacagaggagtggacggacgaggaggcggaggcggaggacggagtggcggcggtggcg
gcggcggcgatggcggcgatgacggcggcggcggcgacgacgggcgcgcaacccgagggg
acgacggagccccctcttcctcctcctcctccgacgacccccggcgccacggagggaggg
gccacggagggaggggccacgccgtccgggacgccggcaaatccgcagcatttgaacggc
gagtcgaagcgaaagcgctgcccgtcgccgcacagcgccgaacagcaggagcagctggac
ctgcagaaggagcaggacggcgtctacaacctgttcttcgtgaacaataactggtacttc
ttcctgcggctgcaccagaccctgtgctcgcggctgctgcgggtgtatcggcaggccgaa
cgccaactgctggagcacagggccgagcagagcgcagagcgcctcctggtggccgagggg
cgcagggacaaagccaccgacctggccatggagctgcgactcaagcaacccagcgaggtg
gagctggaggagtactacccagcgtttttggacatggtgcgcagtctgctggacggaaat
ctggattccatacagtacgaggacacgctgcgggagatgttcaccatccacgcctacatc
ggcttcaccatcgataaagtcatccagaacatcgtccggcagctgcagcacctggtcagc
gacgaggtgtgtgtacaggtagccgagctgtattcgtgtgagaggaggcggggggccacg
ggggggaacctctcgtcccagtgcgtccggacggcgtgggagaccagctaccagtggaaa
gccgagagagtgatgaccgaggagaactgcttcaaggtgatgttcatccagaataaagga
gaagtcacgatgaccgtcgagctgctggatacggaagaggctcaagccgatgatccgctg
gacgtgcagtgcctctccaactacatggagcagtttgtcggcgcagagtccgcctcgtgc
acgcaagcagaaggttgctacttcaagcccgtgttcctgcccaggaacctgcgtcagttc
cggcgctggcagctgaagcaggtggaggcgctgcgctgcaggagggaactccgcgatcag
ctcggggtggaaagtgctggaaacctggactgcaggttcaagctcaacacgcacaagatg
gtgttcgtcatgaactccgaggactacatgtaccgccgcggcgccttgcacaaggccaaa
aagtctcactctcgcgtggtgcgacagcagcacgagcgcttctcccgctggcacagcacg
tggcagagcgtccacgtggccggcgccgccgcccgctccgtgcgctcctggctcctggga
gagaaccccgacgacctgctgccctgcaaaaccacctgtgtgacgtcacaggtgaaaggt
cagactgtcaacaggtaccaggtgcactacagcaaggctccggcgtctccgtga
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