Trichomycterus rosablanca: 134318743
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Entry
134318743 CDS
T09921
Name
(RefSeq) AF4/FMR2 family member 2-like
KO
K15194
AF4/FMR2 family member 2
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134318743
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
134318743
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AFF4_CHD
AF-4
AF4_int
Motif
Other DBs
NCBI-GeneID:
134318743
NCBI-ProteinID:
XP_062855745
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All DBs
Position
8:40649703..40687243
Genome browser
AA seq
1407 aa
AA seq
DB search
MQHLLKLQVCRDLNGVEDDTLQVGGRNCDIWKHVHLEQIHANDAPVILNLSLSAPHRPFI
VPSSSPHCSFIVPLSSFYHPLIAPSLSLHRPFIVPSSSPHCSFIVPSSSPHCSFIVPSSS
LHRPFIVPSLFLHRPFIVPSSSPHRPLIVPSSSPHCSFIVPSSSPHCSFIVPSSSLHRPF
IVPSLFLHRPFIVPSSSPHCSFIVPSLFLHRPFIVPSSSPHRPLIVPSSSPHCSFIVPSS
SPHCSFIVPSLFPHRSFIVPSSSLHRPLIVPSLFLHCSLIVPSLFLHRPFIVPSLFLHRP
FIVPSLFPHRPLIVPSLFPHRPLIVPSSSLHRPLIVPSSSPHCSFIVPSSSPHCSFIVPS
LFPHRSFIVPSSSLHRPLIVPSLFLHCSLIVPSLFLHRPFIVPSLFLHRPFIVPSLFLHR
PLIVPSSSPHRPLIVPSSSPHRPLIVPSSSLHRPFIVPSSSPHCSFIVPSSSLHRPLIVP
SSSLHRPFIVPSSSPHCSFIVPSLFLHRPLIVPSLFLHRPFIVPSSFLHCSFIVPSSSPH
RPLIVYPACKDEDTPRRRDGAFIRLETRRFHEVMNNSAERLPAPTPRSADPGRHSSGASG
SSSESESSSESDSDSESSSSDSECNRASRATTPEPEPPSTNKWQLDKWLNKVTPHNKVLT
NTQTETLGPGSSQPEDVQAPDNQTGAKTKPNAALVQPDPKDRALLSPVREKAKPKTNQKA
PDGKSTKVKTGSCVDLPPSRRSTGKKQPKKVDQSSNSEEPTWTRPGNSSSTPKEKEPPPL
EPAKPRGRASGGKTAPRKEPRSTTGTTASTPTTASIPVPDKKKHRGPSKITPKSKEFIET
ESSSSECHSDSEELSKVHLPCPGPNISNLKSKDCNSNILSVSSLASTSSTSIPDPGATDL
LEEPLFSPISIVPNELLSPLRDFEDVKSLWVKIELSLLSRIPGQDPPEPPPTKAECRESA
GFKHRRQQSPASVILEKTSSKSKRKHKSDHCEVLSASKKLKLEKEVLLLPPCISPIQNHK
LSSAKDSSKKQPRKLLPPLLSPLSDEPVGRQRRSSESSTVSTEGNTSAPASQPSIHSIPP
SSSSLSSSSSSHKHRRGESKVHSKTSSEEDGHVKSSSVHSNGQSDPSTWLNPAALTTENT
EHRRPKLTFNNTVHSAEHYMQEAKKLKHKADALMEKFGKAINYADGALSFIECGNAMERD
PLEAKSPYTMYSETVELIRYAMRLKNFTSHSATLAEKKLAVLCNRCLSLLYLRMFRLKKD
HAMKYSRSLMEYFKNSAKSSQAPSPWGSNGKSTGTPSPMSLSPSPVNSVNSSTGAAGSSS
SSSSSSGTVAIPQRIHHMAASHVNITNNILRSYEHWDTADKLAHESQEFFQELDSLMDPL
TQHSSMTDLVRYIRQGLHWLRIEAHLL
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgcaacatctactgaaactccaggtctgccgagatttaaatggtgtggaggatgacaca
cttcaggtgggaggaagaaactgtgatatatggaaacacgtccacctggagcaaattcac
gctaatgatgcgccggtgatcctcaatttgagtttatctgcacctcatcgtcccttcatc
gtcccttcatcgtcccctcattgttccttcattgtccccttatcgtccttttatcatccc
cttattgccccttcattgtcccttcatcgtcccttcatcgtcccctcatcgtcccctcat
tgttccttcatcgtcccctcatcgtcccctcattgttccttcatcgtcccttcatcgtcc
cttcatcgtcccttcatcgtcccctcattgttccttcatcgtcccttcatcgtcccttca
tcgtcccctcatcgtcccctcattgttccttcatcgtcccctcattgttccttcatcgtc
ccctcatcgtcccctcattgttccttcatcgtcccttcatcgtcccttcatcgtcccttc
atcgtcccctcattgttccttcatcgtcccttcatcgtcccttcatcgtcccctcattgt
tccttcatcgtcccctcattgttccttcatcgtcccttcatcgtcccttcatcgtcccct
catcgtcccctcattgttccttcatcgtcccctcattgttccttcatcgtcccctcatcg
tcccctcattgttccttcatcgtcccttcattgttccctcatcgttccttcattgttcct
tcatcgtcccttcatcgtcccctcatcgtcccctcattgttccttcattgttccctcatc
gtcccctcattgttccttcatcgtcccttcatcgtcccctcattgttccttcatcgtccc
ttcattgttccttcattgttccctcatcgtcccctcattgttccttcattgttccctcat
cgtcccctcattgttccttcatcgtcccttcatcgtcccctcattgttccttcatcgtcc
cctcattgttccttcattgttccctcatcgtcccctcattgttccttcatcgtcccttca
ttgttccctcatcgttccttcattgtaccttcatcgtcccttcatcgtcccctcatcgtc
ccctcattgttccttcattgttccctcatcgtcccctcattgttccttcatcgtcccttc
atcgtcccctcattgttccttcatcgtcccttcatcgtcccctcattgttccttcatcgt
cccctcattgttccttcatcgtcccctcatcgtcccctcattgttccttcatcgtcccct
catcgtcccctcattgttccttcatcgtcccttcatcgtcccttcatcgtcccttcatcg
tcccctcattgttccttcatcgtcccttcatcgtcccttcatcgtcccctcattgttcct
tcatcgtcccttcatcgtcccttcatcgtcccctcatcgtcccctcattgttccttcatc
gtcccctcattgttccttcatcgtcccctcatcgtcccctcattgttccttcatcgtccc
ttcattgttccctcatcgttccttcattgttccttcatcgtcccttcatcgtcccctcat
cgtcccctcattgtttaccccgcgtgtaaagacgaggacacgccgagacgccgagacggc
gcgtttattagattagagacgcggcgctttcatgaagtgatgaataacagcgccgagcgt
cttcctgccccaacgccacgttctgctgaccctggcaggcactccagcggcgcatccggg
agctccagcgaatcagagagcagctcagagtccgactcggacagcgagagcagctccagc
gacagcgaatgcaaccgagcgtcacgcgccaccacaccggagcctgaaccaccatcaacg
aacaagtggcagctggataaatggctaaacaaggtcacccctcacaacaaggttcttacc
aacacccagaccgagacccttggacctggcagctcccaacctgaagacgttcaagctcca
gacaaccagaccggcgctaaaaccaagccgaatgcagccctggtgcaaccagatcccaaa
gatcgagccttgctcagtccggtccgcgaaaaggccaaacctaaaacgaaccagaaagcc
ccagacgggaagtctaccaaggtcaagacgggttcttgtgtcgaccttcctccttcaagg
aggagcacaggcaagaagcagcccaagaaagtggaccagtcgtctaacagcgaggagcct
acctggaccaggccgggcaactccagcagtaccccgaaagagaaagaacctccaccttta
gaaccagccaaaccaagagggagggcgtcagggggtaagaccgcgcctaggaaggagcca
cgatccaccacaggaaccactgcctccaccccaaccactgcaagtatcccagttccagac
aagaagaagcacagaggacctagtaagatcaccccaaagtcgaaggagttcatcgaaaca
gagtcgtcctcatcggagtgccactcggactccgaggaactctcgaaggtacatctcccc
tgcccaggcccgaacatctcaaatctcaaatctaaggactgtaacagcaacatcctgagc
gtcagcagcctcgccagcaccagcagcacctccataccggaccccggcgccaccgacctg
ctcgaggagcccctgttctcgcccatctccatcgtacctaacgagctcctgtcaccgctg
cgggacttcgaggacgtcaagtccctgtgggtgaagatcgagctgagcctgctgtcgcgc
atccccgggcaggacccgcccgagccgccgcctaccaaggccgagtgccgggagagtgcc
ggctttaaacacaggaggcagcagtcgcccgcttctgtcatcctggagaaaaccagcagc
aagtcgaaaaggaaacacaagtcggatcattgtgaggtcctgagtgccagcaagaagtta
aagctggagaaggaggtgctgctcctgcctccctgtatctctcccatccaaaaccacaaa
ctctccagcgctaaagactcatcaaagaagcagcccaggaagctgctgccgccgttactg
tctcccctgtcagacgagcccgtgggtcgccagcggaggagcagcgagagcagtacagtc
agtacggagggtaacacctctgcccccgccagccaaccctccatccattccatcccccca
tcctcttcatcattatcgtcctcgtcttcttctcacaagcaccggagaggagagagtaag
gtgcactccaaaaccagcagcgaagaagacggtcacgtaaagtccagctcggtccattcc
aacggtcagtcggatcccagcacgtggctgaaccctgcggccctgaccacggagaacacg
gagcacaggagacccaaactcaccttcaacaacacggttcacagcgctgaacactacatg
caggaggcgaagaaactgaagcacaaagccgacgccctgatggagaagttcggtaaagcc
attaattatgcggacggcgccctctcctttatagaatgtggtaacgccatggaacgagac
cccctagaggccaaatcaccgtacaccatgtactccgaaaccgtggagctcatcagatac
gccatgagattaaagaacttcaccagtcactccgccacgctcgccgagaagaaactagcc
gtgctgtgtaaccggtgtttatctctgctgtacctccggatgttcaggctgaagaaggat
catgccatgaagtattccagatccctcatggagtatttcaagaactccgcgaaaagttcc
caagcaccttcaccgtggggctccaacggaaagagtacaggaacgccgtcacccatgtcc
ctcagtccctccccagtcaactcggtaaacagcagtaccggagccgcaggctcttcctca
tcgtcctcctcgtcctcgggcaccgtggccatcccgcagcgcatccaccacatggccgcc
agtcacgtcaacatcaccaacaacatcctgcgcagctacgaacactgggacacggccgac
aagctcgcccacgagagccaagagttctttcaggaactggactcgctgatggacccgctg
acgcagcacagcagcatgaccgacctggtgcgctacatccgccaaggactccactggctc
cgcatagaagctcatttgttatag
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