Trichomycterus rosablanca: 134318769
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Entry
134318769 CDS
T09921
Symbol
rlim
Name
(RefSeq) E3 ubiquitin-protein ligase RNF12
KO
K16271
E3 ubiquitin-protein ligase RLIM [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134318769 (rlim)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134318769 (rlim)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134318769 (rlim)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-rbx1
zf-RING_11
zf-C3HC4_2
zf-C3HC4
zf-ANAPC11
zf-RING_5
zf-C3HC4_3
SPT6_acidic
zf-RING_UBOX
Prok-RING_4
zf-RING_16
zf-RING_4
Motif
Other DBs
NCBI-GeneID:
134318769
NCBI-ProteinID:
XP_062855769
LinkDB
All DBs
Position
8:3262835..3270342
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AA seq
691 aa
AA seq
DB search
MEGSDNADQGSSEQSDSQRRQQQDRLNREEDYYQFVNNLSEEDYRLMRDNNLLGNPGELT
EEELLNRLQQIKNGGEQPPNNNNNNNSSSSNSSSSSSSSGSTEVNREEPRAPESEGTEEA
SNGDTLLDWLNSVRQTGNSTRSGHRGNQSWRAVSRTNPNSGDFRFSLEININRNIAEQQT
QTEAERPDGEPNRPEGEPNRPEGEPNRPEGEPNRPEGEPNRPAEEPNRPAEEPNRPAEEP
NRPAEEQTRPDVPAPEPEPEAPVETAEVVEEPVVEEMAVIVEPELPEPVTPPPVTRPPSP
SSLSHLLASSLPRPAAQRGRIRARSPSPEQRRTRARTARSHLAVNLDQLDGLPQAMQNPE
PLPDAQVEGSSRTRLHVLSRQTESQEPSEPAQPRQETEASSGEARRPPTIMLDLQVRRVR
PGEYRERDSIANRTRSRSQTSNNTFMYESERGGLRRTFSRSERAGVRTYVSTIRIPIRRI
SNDGLGEATSMALQSMIRQIMNGFGELSYFMDSDSDSTDSSRASNTSSDLADAPGNPETG
SVSAPPEAVAAAEGSSQPGSEARTDDTEDVGAAQRESRPRQRVPISLEESGSLPFLRLAH
FFLLNDDDDDQPRGLTKEQIDNLSMRNFGESDALKTCSVCITEYAEGNKLRKLPCSHEYH
VHCIDRWLSENSTCPICRRAVLVSANRESVV
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaaggttcagataatgcagatcaggggagtagtgaacagtccgattcacagcgcagg
caacagcaggaccggctcaaccgcgaggaggactactaccagtttgttaacaatctgagt
gaagaggactaccggctaatgagagataacaatctcctcggcaacccaggtgagctcaca
gaggaagagctgttaaaccgtcttcagcagatcaagaatggaggtgagcagccccccaac
aacaacaacaacaacaacagcagcagcagcaacagcagcagcagcagcagcagcagtggt
agtactgaagtcaatagagaggagcccagagcccccgaatcggagggtacagaagaagcc
tctaacggcgacaccctcctcgactggctgaactctgtgcgccagaccggcaacagcaca
cgaagcgggcatcgcggcaaccagtcatggcgggccgtgagccgaaccaaccccaacagc
ggagatttccgcttcagcctggagatcaacatcaatcgcaacatagccgagcagcagacg
cagaccgaggccgagcgcccggacggggagccgaaccgcccggagggagaaccgaaccgc
ccggagggggaaccgaaccgcccggagggagaaccgaaccgcccggagggagaaccgaac
cgcccggctgaggaaccgaaccgcccggctgaggaaccgaaccgcccggctgaggaaccg
aaccgcccggctgaggaacaaacccgcccggatgttcccgcgcccgaacccgaacccgag
gcgcctgtggagactgcggaagtggtggaggagccggtagtggaggagatggctgttatc
gttgagccggaacttcccgaaccagttacccccccgcctgtaaccagacctccaagcccg
tcgtccctgagtcatctcctggcttcttcgcttcctcgcccggcggcgcagagagggcgg
attagggcgcgtagcccgagcccagagcagcgcagaacccgggctcgtacagccaggagt
catttagccgtgaacctcgaccagttagacgggcttccacaggctatgcaaaatcccgag
cccctgccggacgctcaggtcgagggcagttctaggactcggcttcacgttttgtccagg
cagacagaaagccaggagccttcggagccggcgcagccacgacaggagaccgaggcgagc
tccggagaggcccggcgtcctcccacgataatgctggacttgcaggtcagacgagtcaga
ccaggagagtacagagaacgggacagcatcgctaatcgcacccggtctcgctctcagacc
tctaacaacacgtttatgtatgaaagtgagcgcggaggcctgcgcaggaccttttcccgc
tcggaacgggcaggagtcaggacgtacgtcagcaccattcgcattcccatcaggaggatc
tccaacgacggactcggcgaggcgacctccatggcgctgcagtccatgatccggcagatt
atgaacggcttcggcgagctcagctacttcatggactccgattcggactctacggactcc
agccgcgcctccaatacctcctcggatctcgcggacgcccctgggaacccagaaaccgga
agtgtgtctgcgccacccgaggctgtagccgccgcggaaggttcgagtcagcccggctca
gaagctagaactgacgacaccgaggacgtcggcgcggctcagagagagagcaggccgaga
cagagagtgcccatcagtctggaggagtccggctcgctgccctttttacgcctggcgcat
ttcttcttgctgaacgacgacgacgacgaccagcccagaggcctcaccaaagagcagatc
gataacttgtccatgcgcaacttcggcgagagcgacgcgctcaagacctgcagcgtctgc
atcacggaatacgccgagggcaacaagctgcgcaaactgccctgctcgcacgaataccac
gtgcactgtatcgaccgctggctctcggagaactccacgtgccccatttgtcgtagagcg
gttctcgtctccgccaaccgcgagagcgtcgtctag
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