Trichomycterus rosablanca: 134318916
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Entry
134318916 CDS
T09921
Symbol
lingo2
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 2
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134318916 (lingo2)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134318916 (lingo2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
Ig_3
I-set
LRR_5
ig
Ig_2
LRR_9
LRR_RPS2
V-set
LRR_LRWD1
Ig_6
LRRNT
Sp38
Motif
Other DBs
NCBI-GeneID:
134318916
NCBI-ProteinID:
XP_062855939
LinkDB
All DBs
Position
8:14284355..14286202
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AA seq
615 aa
AA seq
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MVDCLSRVMLHKALSCWQPMLGLALVAVFLDSTLACPSRCECSAQSRSVICHRKRFPTIP
DGIPIETRILDLSKNRIQAINPDDFSVYPHIEDLDLSGNIVAYVEPGAFNLLYSLHTLSL
KSNRIKLLSLGVFTGLSNLTVLDISDNKIVILVDYMFQDLHNLKSLEVGDNELVYISHRA
FYGLLALESLTLERCNLTTVPTDALSHLHNLVSLHMRYLSISSLHPYSFRKLFRLRHLEI
DHWPALDVFPANTLHGLNLTTLSVTNTNLSTFPYQALRHMPYLSHLNLSNCRIRTIEGGL
LQDLVHLHELRLSGAQLVSVEPYAFQGLRWLRVLDVSHNQLDTLEKGVFQAPESLEMLLI
NNNPLVCDCRLMWLLQKRHSISFGDEQPECNTPEGIRGRPFKEFKETLLSYYVTCTKPKI
RENRTQLVSVEEGQPAQLHCSAEGTPRPIISWVTPRRRHLTNKSHGRVVVYNNGTLYIKS
VELQDGGVYVCMASNSAGNDTLMVSLAVKSLGSLYANRTQYYTDPNSTTANSTFSPNLTF
GLDLKTILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNNIDIEYVPRSKSNGASPEE
AEQSAGPRRFNMKMI
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atggtggactgcctaagtcgagtcatgttgcacaaagctttatcctgctggcagccaatg
ctgggtctggccctagtggctgtgttcttagactctacactagcctgtccatcccgctgt
gagtgttctgctcaaagccgctctgtcatctgccatcgaaagcgtttcccaactatccca
gatggtattccaatcgaaacacggatcctggaccttagcaagaaccgcatccaggccatc
aatccagatgacttttctgtgtacccacacattgaagatttggacctgagtggcaatatt
gttgcttatgtggagcctggtgcctttaatttactttacagtttacacacgcttagctta
aaaagcaatcgcatcaagctcctctcactgggtgtctttactggcctttccaatctcacc
gtgcttgacattagtgacaataagattgtcatcctggttgattacatgtttcaggacctg
cataatctcaagtcattggaagtgggggacaatgagcttgtgtacatctcgcacagagcc
ttttatggtctgctggctctagagagtctcacactggagcgctgtaacctaaccacggta
ccgactgatgccctgtcccatctgcacaacctggtgagcctgcacatgcgctacctcagc
atcagtagccttcatccttactccttcagaaaactttttcgtctgcgccaccttgagatt
gaccactggcctgcgcttgatgttttcccagccaacaccttgcacggcctcaatctcacc
acactttcagtcactaacactaatttgtccacattcccctaccaggcattgcgtcacatg
ccttacctttctcatttaaacctgtccaactgtcgtatccgtaccattgagggaggcctg
ctgcaggatctggtgcatcttcatgaactgcgactatcgggtgcccaactagtgtctgtc
gagccttacgcgtttcagggtcttcgctggctcagggttctcgatgtctctcacaaccag
ctggacactttggagaagggtgtgttccaggcaccagagtccttggagatgttgctcatt
aacaacaatcctcttgtgtgtgactgtcggctcatgtggctgctgcagaaacgtcattct
atctcatttggagatgagcaacctgagtgtaacacacctgaaggcattcgtgggcgccct
ttcaaggaattcaaggaaacactgctgtcttactatgtgacctgcaccaagcccaagatc
agagagaaccggacacaactggtgtcagtagaagaaggacagcctgctcagctacactgc
agtgctgaggggacacctcgccctatcatatcctgggtgaccccacgacggagacatctc
acgaacaagagtcatggaagggtagttgtatacaacaatggcacattgtatatcaagtca
gtggagcttcaggatggtggtgtgtatgtgtgtatggcctccaactcagctggaaatgac
acactgatggtatctcttgcggtcaaaagtctgggctcgctttatgccaacaggacccag
tactacacagatcctaacagtaccactgccaacagcactttttctcccaacttgaccttc
ggcctggacctaaagaccatcttagtttctacagccatgggttgtttcacattcctggga
gttgtgcttttctgttttctgctcttgtttgtgtggagtcggggcaaagggaagcacaaa
aacaacatagatatagagtatgtgccacgctccaaatccaatggggcatctcctgaggaa
gcagagcagagtgctggccctcggcgctttaacatgaaaatgatttaa
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