Trichomycterus rosablanca: 134318928
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Entry
134318928 CDS
T09921
Symbol
pitx2
Name
(RefSeq) pituitary homeobox 2 isoform X1
KO
K04686
paired-like homeodomain transcription factor 2
Organism
trn
Trichomycterus rosablanca
Pathway
trn04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
134318928 (pitx2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134318928 (pitx2)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain Paired-related
134318928 (pitx2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeodomain
OAR
Homeobox_KN
XRCC4_C
Auxin_canalis
Motif
Other DBs
NCBI-GeneID:
134318928
NCBI-ProteinID:
XP_062855952
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All DBs
Position
8:complement(15425131..15433881)
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AA seq
310 aa
AA seq
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MNSMKDSLSLDHHHHHHISGGVKLMSALHMASKHGVDGNTDTHSPEAAEKEKAQSKNEDL
SDDPSKKKRQRRQRTHFTSQQLQELEATFQRNRYPDMSTREEIAVWTNLTEARVRVWFKN
RRAKWRKRERNQQAELCKNGFGAQFNGLVQPYDDVYPSYTYNNWAAAAKGLAPASLSAKS
FPFFNSMNSISPLSSQAMFSAGPPPPPPHPPAPSSISSMSMSMSSGMAVPASGLNGLNNL
NNLGNASLNSPAAACPYAPPTPPYVYRDTCNSSLASLRLKAKQHSSFGYAGVQNAATNLS
ACQYAVDRPV
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgaactcgatgaaggattccctaagtttagaccatcatcaccaccatcacatctctgga
ggcgttaaactgatgtcggctcttcacatggcctccaaacacggtgtggatggaaacacg
gacacacatagtcccgaggccgcagaaaaagaaaaagcgcagagtaaaaatgaggacttg
tccgatgacccgtcaaagaagaagcggcagcggagacagagaacgcacttcaccagtcag
cagctgcaggagctcgaggccacattccagcgcaaccgttacccggacatgagcacgcgc
gaggaaatcgccgtctggaccaacctgacggaggcgcgagtcagggtctggttcaagaac
cgtcgtgccaagtggcgaaagcgcgagaggaaccagcaggccgagttgtgtaaaaacggc
ttcggcgcgcagtttaacgggttggtgcagccctacgacgacgtctacccgagctatacc
tacaataactgggcggcggcagcaaagggactcgcaccggcctccctctcagccaaaagc
tttccgttctttaactcgatgaactcgatcagcccgctgtcatcgcaggccatgttttcc
gccggccctccgcctccaccacctcatccgcctgcaccgagctccatctcctccatgagt
atgagtatgagctccggaatggccgtgcccgcgtcgggccttaacggcctcaacaacctc
aacaacctcggcaacgcgtcactgaactcccccgccgcggcgtgtccttacgcaccgccg
accccgccctacgtctaccgggatacatgcaactccagcctagccagtcttagactcaaa
gccaagcagcactctagtttcggctatgcgggggtgcagaacgccgccacgaacctcagt
gcgtgccagtacgcagtggacagaccagtgtag
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