Trichomycterus rosablanca: 134319051
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Entry
134319051 CDS
T09921
Symbol
roraa
Name
(RefSeq) nuclear receptor ROR-alpha A
KO
K08532
RAR-related orphan receptor alpha
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134319051 (roraa)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
trn03310
]
134319051 (roraa)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
134319051 (roraa)
Nuclear receptors [BR:
trn03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
134319051 (roraa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
134319051
NCBI-ProteinID:
XP_062856145
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Position
1:complement(34974695..35005786)
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AA seq
485 aa
AA seq
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MLKEQEHAGALMLVAGERKTNNQTQGAHAQIEIIPCKICGDKSSGIHYGVITCEGCKGFF
RRSQQSNAAYSCPRQKNCLIDRTSRNRCQHCRLQKCLAVGMSRDAVKFGRMSKKQRDSLY
AEVQKHRLQQQQREQQQPGEAEPLTPTYGLSANGLTELHDELSGYMDSHAGDGTKQDSGV
SSFYLDIQPSPDQSGLDINGIKPEPICDFTPASGFFPYCSFSNGETSPTVSMAELEHLAQ
NISKSHMETCQYLREELQQMTWQSFLQEEMESYQNKPREVMWQLCAIKITEAIQYVVEFA
KRIDGFMELCQNDQIVLLKAGSLEVVFVRMCRAFDPQNNTVYFDGKYAGPDVFKSLGCDD
LISSVFEFGKNLCSMHLSEDELALFSAFVLMSADRSWLQEKVKVEKLQQKIQLALQHVLQ
KNHREDGILTKLICKVSTLRALCSRHTEKLTAFKAIYPDIVRTHFPPLYKELFGSDFEQS
MPMDG
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgctaaaggagcaggaacacgccggagctctaatgctcgtggcgggagaacgtaaaaca
aacaatcaaacacagggcgcgcacgctcaaattgaaattattccctgcaagatctgtgga
gacaaatcatcaggcatccattacggggtgataacatgcgagggctgtaagggtttcttc
aggaggagtcagcagagcaatgcagcgtactcatgcccacgtcagaagaactgcctgatc
gaccgtaccagccgaaaccgctgccagcactgcaggctgcagaagtgtctggccgtgggc
atgtcacgagacgcggtgaagtttgggcgcatgtcgaagaagcagcgggacagcctgtat
gccgaggtacaaaagcatcgtctccagcagcagcagagggagcagcagcagccgggtgaa
gccgagccactcacgcccacctacgggctctctgcaaacggcctcaccgagctgcacgac
gagctgagcggctacatggacagccacgcgggcgacggtaccaagcaggactcgggtgtc
agcagcttctacctggacatccagccctcacccgaccagtccggcctggacatcaacggc
atcaagcccgagcctatctgcgacttcacgcctgcctcaggcttcttcccctactgctct
tttagcaatggcgagacctcgcccacagtctccatggctgaactagagcatctggcccag
aacatctcaaagtcccacatggagacgtgtcagtatctgagagaggagctgcagcagatg
acctggcagtccttcctgcaggaggaaatggagagctatcagaacaagcccagagaagtc
atgtggcagttgtgcgccattaaaatcacagaggccatccagtacgtggtggagttcgcc
aagcgcattgacggcttcatggagctctgtcagaacgatcagatcgtgctgctgaaagca
ggctccttggaggtggtgtttgtgagaatgtgtcgtgcctttgaccctcagaacaacaca
gtctattttgatggaaagtatgctggccctgatgtgtttaagtcattaggttgtgacgac
ttgatcagctcagtctttgagtttgggaaaaacctgtgttctatgcacctgtcagaggac
gagctcgcccttttttcggcattcgtgttgatgtcggcagaccgttcctggctccaggag
aaggtaaaggtggagaaactgcagcagaagatccagctggctcttcagcatgtccttcaa
aagaaccacagagaagatggcatactgacaaagttaatatgcaaagtgtcgaccctgcga
gcgctgtgcagccggcatacagagaagctgactgctttcaaagcaatatacccggacatt
gtgcgtacccatttcccccccttatacaaggagctctttggatcagacttcgagcagtcc
atgcccatggatgggtag
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