Trichomycterus rosablanca: 134319129
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Entry
134319129 CDS
T09921
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
trn
Trichomycterus rosablanca
Pathway
trn03020
RNA polymerase
trn03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
134319129 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
134319129 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134319129 (polr2c)
03400 DNA repair and recombination proteins [BR:
trn03400
]
134319129 (polr2c)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
134319129 (polr2c)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
134319129 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
134319129
NCBI-ProteinID:
XP_062856213
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All DBs
Position
8:36737922..36743337
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AA seq
275 aa
AA seq
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MPYANQPTVKITELTDENVKFVIENTDLAVANSIRRVFMSEVPTIAIDWVQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKMQYSRDCTCDDFCPECSVELTLDVRCTEDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQDDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVAFEYDPDNALRHTVYPRPEEWPKSEYSELEEEEVQAPYDPTGKPERFFYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtacgctaaccagcccacggtgaagattacagagctgactgatgagaatgtgaag
tttgtgatagagaacaccgacctggctgttgccaattccattcggcgagtttttatgtcc
gaggttccaaccattgcaatcgactgggttcagattgacgccaattcttcagttctgcac
gatgagtttattgcacacagagtggggctcataccgctcaccagtgatgatatcgtagac
aaaatgcagtactcgagggactgtacgtgtgatgatttctgtcctgagtgctcggttgaa
ctgacgctggatgtaagatgtacagaggatcagactcgtcatgtgacgtctcgggatctg
ctgtctaacaaccctcgagtcattccagtgacctccagaagtcgagataacgaccccaac
gattacgtggagcaggatgacattttgctggtgaagcttaggaagggccaggagctcaga
ctccgagcctacgccaagaaaggcttcggcaaggaacacgccaagtggaacccaacagcc
ggggtggcctttgagtatgacccagataatgcactgagacacactgtgtacccccgccct
gaggaatggccgaagagtgagtactctgagctagaagaagaggaagtacaagctccatac
gaccccaccggcaaaccagaaaggtttttctataacgtggagtcgtgcgggtctttgaga
ccagagacgatcgtgatgtcggcgcttgcagtgctaaagaagaaactaagtgacctgcag
acgcagctgagccatgagatccagagtgacgtcctaaccatcaactaa
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