Trichomycterus rosablanca: 134319242
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Entry
134319242 CDS
T09921
Name
(RefSeq) low-density lipoprotein receptor-related protein 5-like
KO
K03068
low density lipoprotein receptor-related protein 5/6
Organism
trn
Trichomycterus rosablanca
Pathway
trn04150
mTOR signaling pathway
trn04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
134319242
04150 mTOR signaling pathway
134319242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134319242
Membrane trafficking [BR:
trn04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
134319242
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_b
Ldl_recept_a
FXa_inhibition
SGL
DUF5050
EGF_LRP2
Motif
Other DBs
NCBI-GeneID:
134319242
NCBI-ProteinID:
XP_062856371
LinkDB
All DBs
Position
8:complement(747069..800885)
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AA seq
999 aa
AA seq
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METLLAELLLYCWFTLIHGSPLLLFANRRDVRLLDAESARAESAVLVSDLEDAAAVDFLF
SESLVFWTDVSEEAIKQTFYNQSSNAVKEAVLGSGQKVVVSGLDSPDGLACDWLGRKLYW
TDSETKRIEVANLDGTCRKVLFWQDLDQPRAIALNPAQRYMYWTDWGEEPRIERAGMDGS
SRRVIIAKDIYWPNGLTIDLDEQKLYWADAKLSFIHRANLDGLQREIVADDLPHPFGLTQ
YHDFIYWTDWNLRSIERADKRSGMNRTLIQGQLEYVMDILVFHSSRQDGTNECSHNNGNC
AHLCLATPSGARCRCASHYTLEPNGRNCSSPSSFLLFSQKSSISRMVLGEQSPDMILPIH
VMRNLKAISFDPLMRFIYWIDGKQSIRKAKDDGSQAATVVSPGPTQPLKQPHDLSVDAYS
RTVYWTCESTNTINVHRMEGHAVGEVLKDEVDKPRAIVVNAEKGYMYFTTLQDRSAKIEG
ASLDGTERESLFTTGLIRPVALALDNKLGKLFWVDADLKRIESSDLSGANRIVLQDSNIL
QPMGLTILADHLYWIDKQQQMIERVDKRSGDKRTRIQGRIQSLTGIHAVELMEPEEFASH
PCYRDNGGCSHICIAKGDGTPRCSCPMHLVLLQNLLSCGEPPTCSGDQFTCATGDIDCIP
MAWRCDGIAECADHSDEMNCPVCSDLQFQCDKGQCVDAQLRCNGEPDCADGSDEQDCNTI
CMPNQFRCSNNKCVLKKQQCDSYPDCVDGSDELFCDFPLSPTDQRHTNTIGPVIGIILSV
FVLGGMCFVCQRVVCRHYKGPNGGFPHDYISGTPHVPLNFISPNNTQHNNCTGISCGKSI
MSSVSLMGSSSSGAPLYDRNHVTGASSSSSSSTKAAFYPQILNPPPSPATDRSLYNTEAF
YSSNSPSTTRSYRPYGLSGVAPPTTPCSTDVCDSDYTPSRWKSNKYYMEVNWDSEPCPPP
PTPRSHYLSAEESCPPSPSTERSYFHLCPPPPSPCTDSS
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atggagactttattagcagaattgctgctttattgctggtttactctcattcacggttct
cccctgctgctgtttgctaatcggcgggatgtgcgtctgttggacgcggagtcggcgcgg
gcggagtcggcggtgttggtcagtgacctggaggacgccgccgccgtcgacttcctgttc
tcggagagtctcgtcttctggacggacgtcagcgaggaggccatcaagcagaccttctac
aaccagagcagcaatgcagtgaaggaggcggtgttgggttccggtcagaaggtggtggtg
tccgggctggactcgcccgatgggctggcgtgtgattggctgggacggaagctctactgg
accgattcagaaaccaaacgcatcgaggtggccaatctggacgggacgtgccggaaggtt
ctgttctggcaggacctggaccagcctcgggctatagcgctgaaccctgctcagaggtac
atgtactggacggactggggcgaggagccgaggatcgagcgagcagggatggacggcagc
agcaggagggtgataatagccaaggacatttactggcctaacggactgaccatcgacctg
gacgagcagaagctgtactgggccgacgccaagctcagcttcatccaccgcgccaacctg
gacggtctgcagcgcgagatcgtagcggacgacctcccgcacccgttcggactcacccag
taccacgacttcatctactggacggactggaacctgcgcagcatcgagcgggccgacaag
cgcagcgggatgaaccggacgctcatccagggccagctggagtacgtcatggacatcctg
gtcttccactcgtcccggcaggacgggaccaacgagtgctcgcacaacaacgggaactgt
gcccacctgtgcctggcgacgccgtccggggcgcggtgccgctgcgcctcgcactacacc
ctcgaacccaacggacgcaactgcagctctccgtccagtttcctgttgttcagtcagaag
agctccatcagtcggatggttctgggtgaacagagtcccgacatgatcctgcccatccac
gtgatgaggaacctgaaggccatcagcttcgaccctctgatgcgcttcatctactggatc
gacggcaagcagagcatccgcaaggccaaggacgacggatctcaggcggcgacggtggtg
tccccgggtcccactcagcctctcaaacagccccacgatctgagcgtggatgcctacagc
cgtacggtgtactggacctgtgaaagcaccaacaccatcaacgttcacaggatggagggc
catgcggtcggggaggttctgaaggacgaggtggacaaacccagagccatcgtcgtcaac
gctgagaaaggctacatgtacttcaccacgctgcaggaccgctcggctaagatcgagggg
gcgtctctggacggcacggagcgcgagtctctgttcaccaccggtctgattcgccccgtg
gccctggcgctggataataaactggggaagctcttctgggtggacgccgatctgaagcgc
atcgagagcagcgacctgtccggagccaatcggatcgtcctccaggactccaacatcctg
cagccgatgggtctgaccatactggccgatcacctgtactggatcgataagcagcagcag
atgatcgagagggtggacaaacgcagcggggacaagaggaccaggatccagggacgtatt
caatcactgactgggattcacgccgtggagctgatggagccggaggagttcgcatcccat
ccatgttaccgtgacaacggaggatgctcacatatctgcattgccaaaggagacgggacg
ccgcgatgctcgtgtccgatgcacctggtgctgctgcagaacctgctgagctgcggagag
cctccgacctgctcgggcgatcagttcacgtgtgccaccggcgacatcgactgcatcccc
atggcgtggcgctgtgacggcatcgccgagtgtgcggaccacagcgacgagatgaactgc
cccgtgtgttcggatctgcagttccagtgtgacaagggtcagtgtgtggacgcacagctg
cgctgcaacggagagcccgactgcgcagacggatccgacgagcaggactgcaacacgatc
tgcatgcctaatcagttccgctgcagcaataataaatgcgtcctgaagaaacagcagtgt
gattcgtaccccgactgtgtggacggttcagacgagctcttctgtgatttcccgctgtcc
cccacagaccagcgccacaccaacaccatcggcccggtgatcgggatcatcctgtcggtc
ttcgtcctgggtgggatgtgtttcgtgtgccagcgtgtggtgtgtcggcactataaagga
cctaacggaggctttcctcatgattacatcagcgggaccccccacgtccccctcaacttc
atcagtcccaacaacacccagcacaacaactgtacaggtatctcgtgtgggaagtccatc
atgagctcagtgagtctgatgggcagcagcagcagtggagctcctctgtacgacaggaac
cacgtcacaggagcttcgtccagcagctcgtcctccacaaaagctgctttctaccctcag
atcctgaatcctcctccatcaccagctacagatcgttctctctacaacactgaggccttt
tactcatccaacagcccgtccaccaccagatcttacaggccgtacgggttgagtggcgtg
gccccgcccaccacgccctgcagtacggacgtttgcgacagcgactacacgccgagccgc
tggaagagtaacaagtactacatggaggtgaactgggactcggagccgtgcccacctcca
cccacgccacgcagccactacctgtcagccgaggagagctgcccaccgtcgccatccacc
gagcgcagctacttccacctgtgccctccaccaccctcaccctgcaccgactcgtcctga
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