Trichomycterus rosablanca: 134319287
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Entry
134319287 CDS
T09921
Symbol
atrx
Name
(RefSeq) transcriptional regulator ATRX
KO
K10779
transcriptional regulator ATRX
Organism
trn
Trichomycterus rosablanca
Pathway
trn04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
134319287 (atrx)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134319287 (atrx)
03036 Chromosome and associated proteins [BR:
trn03036
]
134319287 (atrx)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys4 GATA-factors
134319287 (atrx)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Heterochromatin formation proteins
Other heterochromatin formation proteins
134319287 (atrx)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ADD_ATRX
Helicase_C
Motif
Other DBs
NCBI-GeneID:
134319287
NCBI-ProteinID:
XP_062856442
LinkDB
All DBs
Position
8:2949440..3004555
Genome browser
AA seq
2060 aa
AA seq
DB search
MASSDSNTADQVMEKPGCSSEVMKASSRSKRKPAVVTKHTVLEEVEISSASEQEQECIDE
SNNDGTLDMDALPEDVVVVEPEPVSNEGKDEFKGPEFRNKGGNKGKDETPRRRPDEHLQE
IVNCTACGQQVNHFQRDSVHQHPALKVLICKSCFKYYMSDDIGKDEDGMDEQCRWCAEGG
NLMCCDFCSNAFCKKCILRNLGRKELSSIMNEDSKWHCYVCKPEPLKDFVGHCEKVLQNL
ENMRKVKTDGEKARRESSKHKPGKTQSVALNGKDHSLEGSGSGSGSGSLTFSCKTLEVPK
ELVKKTKKLIETTNGLNSTFVQFIQQAPVYSGENTVRLRHLKAFRSVLADLKKAHASLEE
ALEVEFKEVEMQNGSTESQIKEDAASNATPVEQDQSAKDEEGEDDATDNVPAAPDREDKE
DEVPADVEMTDKANSTPVTAQHKSVESDTKAVVIKQEVETPCEDGDGEAPVDEASLDKDI
MSVPPSVPDELFEMVESLSDCVKQEEEAESAESSDTNANQTGRKSAKANKKLVVKLTPVP
LKITIKKDGKSTTPPQKEKDDALSPDESRRSPRMKTTPLRKSSEKQSKSKSKKAVADDDE
GEGGSKDEEGGAKDGEVGAKDGEGGAKDVEGGAKDEEGGAKDEEGGAKDEEGGAKDDSDS
DEVPEVLRQTANAEAASDDQDAEPNGNATDAADAAETDKKKPQPKKTTAKRKLIESASSS
DSNRDAAKPSSKKRAAKKRKPKGSDSSNHDSDLEKEIKSLSKLSTAKRSSKRSKKREDDG
EEEDESKKEARKGPKRSFERKRRSQRGKEDAKKDSSSSDEEEQQEADSGDDSGDQQKIKP
ITEAALSGVDAFHQSSGDEAQVKEEPSQVVDDDDDPENRIAKKMLLAQIKANYSSGDESS
SGGDDANDEEKPSSKVKNEDGSDDEGKDEETSSDSESDVEVKAKGRRHKLLSKKLTLSEG
DTDDEKPAKSKKEGKRKGRRKVNSDDSDDSDFKQSGSDSKSESALSEEVSEEDEDDKSNK
RRTRSSKKADKDRSYQKEKKKKRRRIKVQDSSSDNKSGDEAEEGEKGEGDDDDDKGTPKN
RKKLRKILKDDKLRSETQNALKEEEERRMRIAEREQLRDKLRETIVVEESSQVACPITTK
LVLDEDEETKEPLLQVHRNLVTKLKPHQVDGVQFMWDCCCESVRKTEKSAGSGCILAHCM
GLGKTLQVVTFLHTILLCEKVNFSTALVVCPLNTVLNWLNEFEKWQEGLKDDESLEVTEL
ATVKRPQERAQALQSWQEDGGIMIIGYEMYRNLTQGRNIKSKKLKEIFQKSLVDPGPDFV
ICDEGHILKNEASAVSKAMNSIRTRRRVVLTGTPLQNNLIEYHCMVNFIKENLLGSVKEF
RNRFINPIQNGQCADSTPTDVRIMKKRAHILYEMLAGCVQRRDYTALTKFLPPKHEYVLA
VRMSPIQCKLYRFYLEHFTGVGSALEGGRGRAGTKLFQDFQMLSRIWTHPWCLQLDYISK
ENKGYFDEDSMDDFIASETEESSMSLTSEDEKPKKKKKRGKGKGQSSDKSDSDDVEVIKE
WNTSSRGGNPEGRNRAEPVEEVRTSSSNPGSPSPEWYKEFVTEADAEILEHSSKIGLLFE
ILRMAEDVDDKVLVFSQSLISLDLIEDFLELAGRAKEEGKESPYKGEGKWFRNIDYYRLD
GSTNALMRKKWAEEFNDMTNIRGRLFLISTRAGSLGINLVAANRVIIFDASWNPSYDIQS
IFRVYRFGQVKTVFVYRFLAQGTMEEKIYDRQVAKQSLSFRVVDQQQIERHFTMNELTEL
YTFEPDQLDDPSEKKSKRATPMLPKDLVLAELLQSFKGHIVGYHEHDSLLDHKEEEALSE
EERKVAWAEYEAEKKGLSMRVNQQSYSSANYGAANYFPFNVAALASMSNQQLEDLINQGR
QKVLEATNALKIVPRESFEDIIQQLWKDNPNMTEAQVQGIALAQKDAIDMELKHREAVYR
DILNKQQMLMMYVQKVLTNRKAQEQQLAQARQAMLINQLAMQNGSLGQIDLLGLYHQQLN
ALGALPNTTMGKNPGPSKGL
NT seq
6183 nt
NT seq
+upstream
nt +downstream
nt
atggcctccagtgactcaaacaccgctgatcaagtgatggaaaagcctggctgttcgagc
gaagttatgaaggccagctcacgctcaaagaggaaacctgccgtggtgaccaagcacacg
gtgttagaggaggtggaaatctcatccgcgagcgaacaggagcaggaatgcatcgatgag
agtaataacgatggcactttagacatggatgcattacctgaagacgtggtggtggtggag
ccagaacccgtcagcaatgaaggaaaggatgaattcaagggcccggagttccgtaacaaa
ggggggaataaagggaaggatgagactccacggaggcgtcctgacgagcaccttcaagag
atcgtaaattgcaccgcgtgcggccaacaggtcaatcatttccagagagattcggtccat
cagcatcctgcactcaaagttcttatctgtaagtcgtgttttaagtattacatgagcgac
gacatcggaaaggatgaagacggaatggatgaacagtgcaggtggtgtgcagagggagga
aacctcatgtgctgcgacttctgcagcaatgctttctgcaaaaaatgcatcctgcgtaac
ctcggaaggaaggagctgtcctccatcatgaacgaggacagcaagtggcactgctacgtg
tgcaagcccgagccgctcaaagacttcgtgggtcactgcgagaaggtcctgcagaatctg
gagaacatgaggaaggtgaagacggacggagagaaggcgagacgggagagttcgaagcac
aagcccgggaagactcagagcgtagccctgaacgggaaggatcacagtttggagggctcg
ggatcaggatcaggatcggggtctctgactttctcctgcaagacgttagaggtcccgaaa
gagctggtgaaaaagacgaagaagctgatcgagacgacgaacggcctgaacagcacgttc
gtccagttcatccagcaggctccggtctacagcggggagaacaccgtccggctcaggcac
ctgaaggccttcaggtccgttctggccgacctcaagaaggcccacgcgtccctggaggag
gcgctggaggtggaatttaaagaggtggagatgcagaacggatcgacggagagtcaaatc
aaagaggacgccgcctctaacgcgactcctgtggagcaagaccaaagcgctaaagacgag
gagggtgaagatgacgcgacagataacgttccagcagctccagatcgtgaagacaaggag
gacgaggttccggctgatgtagaaatgaccgataaggctaattccacgccagtgaccgca
cagcacaagtcggtagaaagtgacaccaaagccgtagtcatcaagcaggaggtcgaaacc
ccgtgtgaggatggtgatggcgaagctccagtggatgaagcgtctctcgacaaggatatc
atgtccgttccaccctccgttcccgatgaactcttcgagatggttgaaagtctttcagac
tgcgtaaagcaagaagaagaagccgaatcggccgagtccagcgatactaacgcgaatcag
accggcagaaagtctgcaaaagcgaataaaaaactcgtcgtgaagctaaccccagttcct
cttaaaatcaccatcaagaaggacggaaaatccaccacgcccccgcagaaagagaaagac
gacgccctgtcaccggacgagagcagacgatcgcccaggatgaagaccacacccctgcgc
aaatcgtctgaaaagcaaagcaaaagcaagtccaaaaaagccgtggcggacgacgacgaa
ggagaaggcggctccaaggacgaagaaggcggcgccaaggacggagaagtcggcgccaag
gacggagaaggcggcgccaaggacgtagaaggcggcgccaaggacgaagaaggcggcgcc
aaggacgaagaaggcggcgccaaggacgaagaaggcggggccaaggacgactcggattcg
gacgaagtccccgaagtcctgcgccagaccgcgaacgcggaggccgcctcggacgaccag
gacgccgagcccaacgggaacgccacggacgccgccgacgccgccgaaaccgacaagaag
aagcctcagccgaaaaagaccaccgccaagaggaagctgatcgaaagcgcgagctcgtcc
gattcgaaccgcgacgccgcgaagccgtcgagcaagaagagagccgccaagaagagaaag
cccaaaggatcggactcctcgaatcacgactccgacctcgagaaggagatcaagagcctg
agcaagctcagcaccgcaaagaggtcgtccaaaagaagcaagaagcgggaggacgacggc
gaggaggaagacgagagcaagaaggaggccaggaaaggacccaagaggtcgttcgagcgc
aaacggaggtcacagagaggtaaagaggacgctaagaaagattcatcgtccagcgacgag
gaggagcagcaggaggccgactcgggagacgacagtggagatcaacagaagatcaagcca
atcactgaggctgctctgtccggcgttgatgctttccatcagtcgtcaggtgatgaagct
caagtcaaagaggagccctctcaggtggtcgatgacgacgacgacccggagaacagaatc
gcgaagaagatgctgctagcccaaatcaaagccaattactcgtccggagacgaatcctct
tccggaggtgacgacgccaacgatgaggaaaagccttcgtcgaaagtgaagaacgaagat
ggctctgatgatgaagggaaagacgaagagacgagctcagactccgaatcggacgtggag
gtgaaagcgaaaggacggaggcacaagctgctcagtaagaagctgacgctcagcgagggc
gacacggacgacgagaaaccggccaaaagcaagaaggaagggaagaggaaaggacgacgg
aaagtgaacagcgacgactcggacgattcggacttcaagcagtctggctccgattcgaag
agcgagtcggcgctgagtgaggaggtgagcgaggaggacgaggacgacaagagcaacaag
aggagaacgcgatcctccaaaaaagcggacaaagaccggagctaccagaaagagaagaag
aagaagcgacggcggattaaagtgcaagactcctcctccgataacaagagcggcgacgaa
gctgaagaaggtgagaagggagagggggacgatgatgatgataagggcacgccgaagaac
cgcaagaagctccgcaagatcctgaaggacgacaagctgcgctcggagactcagaacgcg
ctgaaggaggaggaggagagacggatgcgcatagcagagagagagcagctgagagataag
ctgcgagagaccatcgtggtggaggagtcgtcacaagtcgcctgccctattaccacaaag
ctggtgctggatgaggacgaggagaccaaggagccgcttcttcaggtccacaggaacctg
gtgaccaagctgaaacctcatcaagtggacggtgtacagttcatgtgggattgctgttgt
gagtctgtgaggaagacggagaagtcagcaggttctggctgtattcttgcacactgtatg
ggtctgggaaaaacccttcaggtggtgacgttccttcacaccatcctcctgtgcgagaag
gtcaacttctccacggcccttgtggtgtgtcctctcaacaccgtcctcaactggcttaat
gagttcgagaagtggcaggagggcctgaaggatgatgaaagtttagaggtgaccgagctg
gccacggtaaagcggcctcaggagcgagcacaagccctacagagctggcaggaagacggc
ggcatcatgatcatcggctacgagatgtaccgtaacctcacgcaggggcgcaacatcaag
agcaaaaaactcaaagaaattttccagaagtctctcgttgacccaggtcctgacttcgtt
atttgcgacgaggggcacatcctaaagaacgaagcctcggccgtgtccaaagccatgaac
tccattagaaccaggcgacgggtggtgctgaccggaacaccgcttcagaacaacctgatt
gaataccactgcatggtgaatttcatcaaggagaacctactgggttcagtgaaggagttc
aggaaccgattcatcaacccaatccaaaacggccagtgcgccgactccacgcccaccgac
gtgcgcatcatgaagaagcgtgcacacatcctgtacgagatgctggcgggatgcgttcag
agaagagactacacagcactgaccaaattcctccctccgaaacacgagtacgtgttagcg
gtgcggatgtctcccatacagtgcaagctctacagattctacctggagcactttacaggt
gtgggttctgccttggaggggggaagaggtagagcgggcacgaagctcttccaggacttc
cagatgttgagcagaatctggacccatccttggtgtctgcagctggactatatcagtaaa
gaaaacaagggctactttgatgaggacagcatggacgacttcatcgcctccgagaccgag
gagtcctcgatgagcctgacgtccgaagacgagaagcccaaaaagaagaagaaacggggg
aaaggcaagggtcagagctcagacaagtctgatagcgatgatgtggaagtgattaaagag
tggaacaccagctcacgtggaggaaaccctgaggggcggaacagggccgagcctgtggag
gaagttcgtaccagcagctcgaaccctggcagcccgtcacccgagtggtacaaggagttt
gtgaccgaagcggacgccgagattctggagcactccagcaaaatagggctgctgttcgag
attctgcggatggctgaggatgtggacgataaagttttggtgttcagtcagtcgctgatt
tcactggacctcatcgaggatttcctggagctggccggtagagccaaagaggaggggaag
gagtctccgtacaaaggtgaaggaaaatggttcagaaacatcgactattaccgcctggat
ggttccaccaacgccttgatgaggaagaaatgggctgaggaattcaacgacatgaccaac
attcggggtcgtctgttcctcatttccacgagagcgggatcactagggattaacctggtg
gcagcaaaccgggtcattatctttgatgcctcgtggaacccgtcgtacgacatccagagt
atcttcagggtgtaccgcttcggccaggtcaagacggtcttcgtgtaccgcttcttggcg
cagggaaccatggaggagaagatttacgaccggcaggtggccaagcagtcgctgtccttc
agagtggtcgaccagcagcagatcgagcgccacttcaccatgaacgaactgaccgaactg
tacaccttcgagcccgaccagctggacgacccgtcggaaaagaaaagcaagcgggctacg
cccatgttgcccaaggacctggtcctggctgagctgctccagagcttcaaaggtcatatc
gtgggctaccacgagcacgattccctgctggaccacaaggaggaggaggctctgagcgag
gaggaacggaaggtggcctgggccgaatacgaggccgagaaaaagggtctctccatgcgc
gtcaaccagcagtcgtactcctctgcaaattacggagcagccaactacttccccttcaac
gtggctgcgctggcctctatgtccaaccagcagctggaggatctgatcaaccagggccga
cagaaggtgctggaggccaccaatgctctgaagatcgtgcccagagagtcctttgaggac
attatccaacaactgtggaaggacaaccccaacatgaccgaggcccaggtgcagggcatt
gctctggcccagaaggatgccatcgatatggagctcaaacacagagaggctgtgtaccga
gatatcctcaacaagcagcagatgctgatgatgtacgtgcagaaggtgctgaccaaccgc
aaggcgcaggagcagcagctggcgcaggccagacaggccatgctgatcaaccagctcgcc
atgcagaacggcagcctgggtcagatagatctgctgggcctgtaccaccaacagctgaac
gccctcggagctctgccaaacaccacaatgggcaagaaccccgggccctccaagggcctg
tag
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integrated database retrieval system
