Trichomycterus rosablanca: 134319372
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Entry
134319372 CDS
T09921
Name
(RefSeq) laminin subunit beta-4-like
KO
K06245
laminin, beta 4
Organism
trn
Trichomycterus rosablanca
Pathway
trn04510
Focal adhesion
trn04512
ECM-receptor interaction
trn04518
Integrin signaling
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
134319372
04518 Integrin signaling
134319372
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
134319372
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Ortholog
Paralog
GFIT
Motif
Pfam:
EGF_laminin
Laminin_N
LAMB1
EGF_LMN_ATRN
LAMININ_IV_B
LAMB4
F5_F8_type_C
Motif
Other DBs
NCBI-GeneID:
134319372
NCBI-ProteinID:
XP_062856618
LinkDB
All DBs
Position
1:36913802..36954424
Genome browser
AA seq
1798 aa
AA seq
DB search
MGGEVMSALLLLVLVVPAYFQDECDGNLCYPSLGDLMVGRAAQLSATSTCGLNGPQNYCI
LGYLEDEQKCFVCDSRSPYNLHNNHNSHQVDNIITNFEPERKMRWWQSENGVHQVSVQLD
LETVFQFSHMVLTFKSFRPAAMLVERSKDFGRTWKVLRYFSVDCASDFPRISEGPAEAID
DLICDTRYSGAEPSTEGEVVFKALDPNFHIDDPYDPTIQELITMTNLRVNFTRLLTLGDD
LLGRKRRYPQEKYYYSLYEMVVRGSCFCNGHASQCMPVDGTRGDTFNQPGMIHGRCTCEH
NTMGNNCEKCQPFYNDAPWRPATITDPHVCRKCNCNGHSESCHFDLEHYLATGQTSGGVC
DDCRNNRMGAQCELCSPRFYQDPLRSVDDPYSCIPCNCDPVGSVDGGLCDSVTGHCVCKE
NVEGERCDRCRVGFYGLEQEDPSGCQACMCNFLGTVRTSPCDQNTGQCICELFASGLECD
QCLPGYWGLGNTVHGCAPCDCDIGGAFNTMCSLDNGQCQCRANMVGRSCSEPAPGFFLAP
FDFYLYEAENAVPLDSKCPTIKPTRRPYCPPAPSKYPTSAPVPTKPAQMPNCADYFRSKG
FDVYFRDGRFVVVKRESRRKRRQDQRTISLQPGSAHEVILRSQTPDGPITWTGPGFVQVQ
DGAGLRFTVTNIPLSLNYNLVIRYEPQSTDDWKATVKFLPLESTDESCPYDPNEKTLTLP
STGRAATLDTPLCVSFGVRYYVDITFEKQDNPDCSSHILIDSVGLLPKIESLPNFCSDTD
LAQYQHYDCEKLGAQAGERTLPEVCERLFASISAYIHNGAISCRCNSEGSLSSVCKRIGG
QCDCKPNVVGRCCDTCAPLTYGFGSDGCFPCDCDPAGSKDEYCDSITGQCPCHNQFTGRQ
CNQCMPGFYDFPNCKRCQCNGLANLCDQITGVCLNCREHSTGPNCERCEEGYFGDPVSRE
PCKPCSCPDLKGSGRFFASTCHKDPNSVSLTCVCETGHEGLRCDKCAPGYFGNLILPGAR
CKKCSCNNNIDPSDPEACDTVTGDCRRCLYNTAGPQCQNCKPGYYGNALLQDCKQCSCDP
KGTIASKCPQGSPCLCDQVTGKCPCRTGVVGVLCDRCADGYWNMTGSCQPCNCDVANSLN
NVCDKVTGQCTCETGYGGKQCEKCAANHFGNPDIQCMPCECNMEGSVYPGCDPETGDCIC
RPGVVGYFCDKCAPGHDPTFPTCEPCSSCYQQWEKNFTNIFKSTEKMLSLTSKLGGKLEL
SELKLQGKINQLKDKLMNVVKLLRRDPDMFGGIKNLLNQIRDTMDNMDTDIVIIDPSKLL
NTDIDNIHYEFKKLLDKLQKKVQDAKKIDIKSINDGFQKIRKLHANFLKDETRVNNAKKK
LDASMQTRQDAKRELAKCEQKPLDELEKKVKDLSVAKLNEEICGAQDDKECKKVKCEGAL
CGLCGWPSCTGSLPIIRDTFDTAKKTETGIRELLRNLTDAETKIKEVKKTTRDVKDKANG
MRDKITKTKDKLEKEKDSTKRLIKRISDYLKEDALDPEDINKVASAVLAIKLPKSPDEIK
KMIEEIQRKMGNFTQFNEDLKKLEDQAKLAKDLKDKANEILDKTKDIDVSDIEKILKDTT
KLHDKIKPNLDQTENNIDAAKDLIDESLPKLANAEENLSPTPAKKLQEEIEALKDKTEMN
RAQALDAKKAAGAALVNATDAKKNLKEVEEQLKKLKNNTQDVSEDIKERLMNITKEAEDM
AKDVENKKKLIEDLEKRIQDSIESKNDKMIELESLMTEAEDLWKNISESVAYYLVCTT
NT seq
5397 nt
NT seq
+upstream
nt +downstream
nt
atgggtggagaggtgatgtctgcactgctgctccttgtgctggtagtgcccgcttatttc
caggatgagtgtgatggaaacttgtgttatcccagcctaggcgatcttatggtgggtcgt
gctgcccagctgtctgccacttccacatgtggtttaaatgggccccaaaactactgcatc
ctgggatatctggaggatgaacagaagtgttttgtttgtgactctagaagtccttacaat
ctgcacaacaaccataacagccaccaagtagataacattatcaccaactttgaaccagag
cgcaaaatgagatggtggcagtctgaaaatggtgtgcatcaagtcagcgttcagctggac
cttgagaccgtttttcaatttagccacatggtccttacatttaagagtttccgacctgca
gcaatgttggtggagaggtcaaaagactttgggcgtacttggaaggtgttacgatacttt
tctgtagactgtgccagtgacttccccagaatctcagaaggtccagctgaagctatagac
gatcttatctgtgacacccgctactctggagctgagccctctactgaaggcgaggtggtt
tttaaggctctggaccccaactttcatattgatgatccatatgaccccactattcaagag
ctcatcaccatgactaacctgcgagtgaactttacacgtttactcaccctgggggatgac
ttgctgggaagaaagagaagatacccacaagaaaaatattactactctctttatgagatg
gtggtcagagggagctgcttctgcaatggccatgccagccagtgtatgcctgttgatggc
acacgtggagataccttcaatcaaccaggcatgattcacggacgatgcacgtgtgaacac
aacactatggggaacaactgtgagaagtgccagcccttttacaacgacgccccctggagg
ccagctacaatcactgacccgcatgtttgcagaaagtgtaactgcaatggccactcagag
agttgtcactttgacttggaacattacttggcaactgggcagaccagtggtggtgtgtgt
gatgactgcagaaataatcgcatgggtgctcagtgtgaactctgtagtccacgcttctac
caggatcctctgcgctctgtagatgatccttattcctgtataccctgcaactgtgatcca
gttgggtcagtggatggaggactgtgtgattcagtcactggccactgtgtatgtaaggaa
aatgtagagggtgaacgctgtgaccgttgtagagtgggcttttatggacttgaacaggaa
gaccccagtggctgccaagcttgtatgtgtaacttcttgggcactgtacgcacatcccca
tgtgaccagaacacaggccagtgtatttgtgaactgtttgccagtggactggagtgtgac
cagtgtctaccaggttactggggacttggaaacacagttcatggatgcgctccatgtgac
tgtgacataggtggagccttcaataccatgtgttccttagacaatggtcagtgtcagtgc
agagctaatatggtgggacgtagctgtagtgagcctgcacctggtttcttcctggcacct
tttgacttctatttgtatgaggctgaaaatgctgttcctctggacagcaagtgtcccaca
ataaaacccactaggcgtccttactgcccgccagcaccctcgaaatatcctacttctgct
cctgtgccaacaaaaccggcccaaatgcccaactgtgcagactacttcagaagcaagggt
tttgacgtttactttagggatggaagatttgtggtggttaaacgtgaaagtcgccgaaag
cgaagacaagaccaaagaaccatttctttgcaaccaggatcagctcatgaggttatcctc
cgatcacaaactccagatggacctatcacttggactggaccaggatttgtgcaggttcag
gacggagcaggacttcgatttacagtcactaacatcccattgagtcttaactacaatctt
gttattcgttatgagccacagtccacagatgactggaaagcaactgtaaaatttttgcct
ttggaatctactgatgaaagctgtccgtatgatccaaatgagaaaacgctcacacttcca
agcactggcagggccgccaccctggacaccccattatgtgtcagctttggtgtgcgatac
tatgtggatatcacatttgagaaacaggacaatcctgactgcagctcacatatccttatt
gattcagtgggacttttaccaaagatagagtctcttccaaatttctgctcagatacagat
ctggctcagtaccagcattatgactgtgagaagctgggtgcacaagcaggagaacgtact
ctacctgaggtgtgtgaaagactgtttgccagcatttccgcctatatccataatggtgca
atctcttgtagatgcaattcagaggggtcactcagctcagtttgcaaaagaattggagga
caatgtgactgcaaacccaatgtggttggccgctgctgtgatacctgtgcacctcttact
tatgggtttggctcagatggctgcttcccatgtgactgtgatccagctggctccaaagat
gagtattgtgactccatcactggacagtgcccatgtcataatcagtttacaggaagacag
tgtaaccagtgtatgccgggattttatgattttcctaactgcaagcgttgccagtgcaat
gggctggctaacctctgtgaccagattactggagtttgtttgaattgcagagagcattca
actggacccaactgtgaaaggtgtgaggagggttactttggtgaccctgtgtcaagggag
ccctgcaagccatgcagctgtccagatttaaaaggcagtggacgtttttttgctagcacc
tgccacaaagacccgaattctgtaagcctgacctgtgtatgtgagactgggcatgaaggc
ttacgctgtgataagtgtgcacctggttactttggtaatctgatattaccgggtgctaga
tgcaagaagtgttcctgcaacaacaacattgacccaagtgatcctgaagcatgtgacact
gttactggagattgtcgtcgttgtctgtacaacactgctggacctcagtgtcagaactgc
aagccaggttactatggaaacgctctgctccaggactgcaaacaatgttcttgtgaccct
aaaggaactatagcatccaagtgcccccagggcagcccctgtttgtgtgatcaggtaact
gggaagtgcccgtgccgcactggtgtggttggtgttctatgtgatcgttgtgctgatgga
tattggaatatgactggaagctgccagccgtgtaactgtgacgtagcgaactctctcaac
aatgtgtgcgacaaggttacaggccagtgtacttgtgagacaggatatggtggcaaacag
tgtgaaaaatgtgcagccaatcattttggaaatccagacattcagtgcatgccctgtgaa
tgtaacatggagggctcagtctacccaggatgtgatcctgaaactggagattgcatttgt
cggccgggagtggtgggctacttctgcgataagtgtgccccagggcatgatccaaccttt
cctacttgtgaaccatgcagctcttgttaccaacagtgggaaaaaaatttcaccaacatc
ttcaagagtactgagaaaatgctctccttgacgtctaaacttgggggaaagctggagctt
agtgaattgaaacttcaggggaagataaatcaactaaaagacaaactgatgaacgtagtg
aaattgttacgtcgtgaccctgacatgtttgggggcataaaaaatcttctaaatcaaatc
agggacactatggacaacatggatacagacatagtaattattgatccatctaagctgctg
aacacagacattgataacattcattatgagttcaaaaagcttctggataagctgcagaaa
aaagttcaagatgccaaaaaaattgacataaaatcaataaatgatggtttccaaaaaatt
cgcaagctccatgctaatttcctaaaagatgaaacgcgtgtaaacaatgctaaaaaaaag
ttggatgcttccatgcagactcggcaggacgctaaacgggaactggctaagtgtgaacag
aaaccactggatgaactagagaaaaaggtcaaagacctcagtgtggccaagcttaatgag
gagatttgtggagctcaagatgataaagagtgtaagaaggtaaagtgtgagggtgctcta
tgtggattgtgtggctggccatcctgtacaggaagtctacctatcataagggacaccttt
gacacagcaaagaagactgaaacaggcatccgtgaactgctgcgaaatctcacagacgca
gagacaaagattaaagaagtaaagaaaactactagggatgtgaaagacaaggcaaacggc
atgagggataaaatcacaaaaactaaggacaagcttgagaaagaaaaggattctaccaaa
agacttatcaaacgtatctccgattacctcaaagaagacgcactggacccagaggacatt
aacaaggtagcctctgctgtattggctatcaagcttcccaagtccccagatgagattaaa
aaaatgatagaggaaatccagagaaaaatgggcaacttcacacaatttaatgaggacctg
aaaaagttggaggaccaagccaaattagccaaagacttgaaagataaggctaatgaaatc
ttggacaaaaccaaggatattgatgtcagtgatatagagaaaatcctgaaggatactacc
aagctacatgacaaaattaagccaaatctggatcagactgaaaacaacatagatgctgct
aaagatttaatagacgagagcctacctaaactagcaaatgctgaagaaaacctgagccca
actccagccaaaaagctgcaggaggaaattgaggctctaaaagataaaacagaaatgaac
agagctcaggctttggatgctaaaaaagctgctggtgcagctttagtcaatgctacagat
gccaaaaagaatcttaaagaagtagaagagcagttaaaaaaactgaaaaacaatacccag
gatgtaagtgaagatattaaagagcgtctaatgaacattacaaaagaggctgaagatatg
gctaaagatgttgaaaataaaaagaagctaattgaagatttggagaaaagaattcaagat
tctatagaaagcaaaaatgacaaaatgatagaactggagagcttgatgacagaggcagaa
gatttgtggaaaaacattagtgaaagcgtggcatactatttggtatgcactacctag
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