Trichomycterus rosablanca: 134319379
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Entry
134319379 CDS
T09921
Symbol
rnf130
Name
(RefSeq) E3 ubiquitin-protein ligase RNF130 isoform X1
KO
K15701
E3 ubiquitin-protein ligase RNF130 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134319379 (rnf130)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134319379 (rnf130)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134319379 (rnf130)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
PA
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-rbx1
zf-RING_5
zf-RING_UBOX
zf-C3HC4_3
zf-ANAPC11
zf-RING_Vps41
PspB
Nlp36
DUF2254
Motif
Other DBs
NCBI-GeneID:
134319379
NCBI-ProteinID:
XP_062856596
LinkDB
All DBs
Position
8:complement(16099560..16225445)
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AA seq
431 aa
AA seq
DB search
MQKRLRILLTPIGFPLCSIILLLLPKCVLCASTEKTVVNKEEYYSATINATIQEVKGNGR
RIISKEDGRYGQNSPKTEVKGIIIIPSTVNGVVDMQGCCPYTRFVIPPKTTHWIALLQRG
KCTFKEKILKAAAFNASAVLIYNNSSKEDTVTMAHEGTGDTVAVMITESLGKDIISFLEK
NETVVVSVSVGSRGPVKNLNRGSLVFVSISFIVLMIISSAWLIFYFIQKIRDTTARDRSQ
RRLGDAARKAISKLTTRTVKRGDKETEPDFNHCAVCIEGYQLNDIVRVLPCKHVFHKMCV
DPWLNEHCTCPMCKLNILKALGITTNLQCVDNVAFDMEHLSRTHSSSQRVALMDASSDTS
GSVDPLTRSGSSQLLSESELTHSHHSGEINIAVTKEWFIVGSFAIISVLTLCYMIIRATG
SNYDNRILEIE
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcagaagagactgagaatattgttgactcctattggttttccactttgctctattatt
ttgcttctcttgcccaagtgtgtgttatgtgcaagtacagagaaaactgtggttaacaaa
gaggagtactatagtgccacaatcaatgccaccatccaggaagttaaagggaatggcaga
aggattatatcgaaggaggatggcaggtacggacagaattcacctaaaacagaggtgaaa
ggaatcataataataccttctactgttaatggagtggtggacatgcagggctgctgtcct
tacacacgttttgtaattcctccaaagaccacgcactggattgctctgcttcagcgagga
aagtgcacttttaaagagaagattttaaaggctgcagcctttaatgcctctgctgtgctt
atctacaacaacagttctaaagaggacacggtgacaatggcacacgagggcactggagac
acagtggcggtgatgattacagagtcattgggaaaggacatcatttcattcttagaaaag
aatgagacagtggtagtttcagtgtcagtcggatctcggggtccagttaagaacctgaac
cgtggctcactggtctttgtttccatctccttcattgttctaatgatcatctcatccgca
tggcttatcttctactttatacagaaaatcagagacaccactgcacgagatcggagccag
cgacgcctcggagatgctgcgaggaaagctatcagtaaattgacaactcgtacggttaaa
agaggggacaaggaaacagaacctgattttaatcattgtgctgtgtgcattgaaggctac
cagctgaacgacattgttcgtgttttgccttgcaagcatgtcttccataagatgtgtgtg
gatccatggcttaatgaacactgtacctgtcccatgtgtaaacttaacattcttaaagct
ctgggtatcacgaccaatttacagtgcgtagataatgtggcgtttgatatggaacatttg
tcacgcactcactcctccagccagcgggtggcgctgatggatgcatcgtctgacactagt
ggaagtgtggacccactgacacgctcaggttcaagtcagctactttctgaatcagagctt
acacattcacaccacagcggggaaatcaacattgctgttaccaaggaatggtttattgtg
ggcagcttcgctattatcagtgttttaacactgtgctacatgatcatcagagctactggc
agcaactacgacaacagaatattggaaattgaatga
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