Trichomycterus rosablanca: 134319430
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Entry
134319430 CDS
T09921
Symbol
g3bp1
Name
(RefSeq) ras GTPase-activating protein-binding protein 1
KO
K17265
Ras GTPase-activating protein-binding protein 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
134319430 (g3bp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134319430 (g3bp1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
trn04147
]
134319430 (g3bp1)
Enzymes [BR:
trn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
134319430 (g3bp1)
5.6.2.5 RNA 5'-3' helicase
134319430 (g3bp1)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
134319430 (g3bp1)
Exosome [BR:
trn04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
134319430 (g3bp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NTF2
RRM_1
RRM_7
NXF_NTF2
Motif
Other DBs
NCBI-GeneID:
134319430
NCBI-ProteinID:
XP_062856678
LinkDB
All DBs
Position
8:complement(25162129..25174204)
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AA seq
476 aa
AA seq
DB search
MVMEKPSAQLVGREFVRQYYTLLNQAPDYLHRFYGKNSSYVHGGLDSNGKPAEAVYGQSE
IHKKVMALSFRDCHTKIRHVDAHATLNEGVVVQVMGELSNNMQPMRKFMQTFVLAPEGTV
ANKFYVHNDIFRYQDEVFGDSDSEPPEDSEEEVEELDERANSPEVQQEVVPTYYEPTPCV
EPEAPQEEVAVTPEPQPEPELEPEATAVELKQESVGQAEPLSVEKSPRAPPSPTPAETAP
IMPEENRPFSWALVTSKNLPQGGVVPATGIPPHVVRAPVNHQPARVEVKTETQTPAQRPQ
RDQRPRDQRPGPPPPQRAPRPVREGESGEAEVRRVVRYPDSHQLFVGNVPHDVDKAELKE
FFEQYGTVLELRINSGGKLPNFGFVVFDDSEPVQKILSNRPIKLRGDVRLNVEEKKTRSA
REGDRRDIRPRGPGGPRDRIPGPRGPPSRGGMAQKPSFGAGRGAGSSEGRYAGPRQ
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
atggtgatggagaagccaagtgcccagcttgtcgggcgagagtttgtccgacagtattac
acacttctgaaccaggctcccgactacctccacaggttttatggcaagaattcttcctat
gtgcatggaggcctggacagtaacggcaaaccagcagaggctgtctatggccaatcggaa
attcataaaaaggtaatggcgctgagcttccgtgattgtcacacaaaaatcagacacgtt
gatgcccatgccaccctgaatgaaggtgttgtagttcaagtaatgggagagctgtccaac
aacatgcagcccatgaggaaatttatgcagacctttgtgctggcccctgagggaactgtt
gcaaacaagttctacgtacacaatgacattttccgctatcaggatgaagtgttcggggac
tcggactctgaacctcccgaggactcagaggaggaagtggaggagctggatgagagagcg
aactctcctgaggtgcagcaagaagtggtgcctacatactacgagccaactccttgtgtg
gagcctgaggctcctcaggaggaggtagctgtaaccccagaaccccaacctgaacctgag
cttgagcctgaggcaactgcagtggaactgaaacaggagtctgtaggtcaggctgagccc
ctttctgtggagaaaagccccagggctcctccttcacctacacctgccgagactgcaccc
atcatgccagaggaaaaccggcctttctcatgggccctagtcaccagtaagaatctcccc
caaggaggtgtggtaccagcaacaggaattcctcctcatgtagtcagagctccagtgaat
catcagccagccagagtggaagttaaaacagaaacccagaccccagcacagagacctcag
agagatcagagaccccgtgaccaaagaccaggtccccctccaccacagagagcgccaaga
ccagtgcgggaaggagagagcggagaggctgaggtgaggcgagtggtcaggtaccccgac
agccatcagctctttgtcggaaacgtaccacatgatgtagacaaagccgaactaaaggag
ttctttgaacagtatggaactgtgctggagttgaggatcaatagtggtggcaaattgcct
aactttggatttgttgtttttgatgattctgagccagtacagaagatcttgagcaaccgg
cccattaaactcagaggcgacgtgcgtctaaacgtggaggaaaagaaaacccgttcagca
cgtgaaggagaccggcgagacatccgtcccagaggcccaggaggacctagggaccgtatc
ccaggcccgagaggaccaccatctagaggtggcatggctcagaagccaagtttcggcgcc
gggcgaggtgcaggctccagcgagggtcgttatgcaggaccacgccagtga
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