Trichomycterus rosablanca: 134319489
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Entry
134319489 CDS
T09921
Symbol
acanb
Name
(RefSeq) aggrecan core protein
KO
K06792
aggrecan 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
trn00535
]
134319489 (acanb)
00536 Glycosaminoglycan binding proteins [BR:
trn00536
]
134319489 (acanb)
04091 Lectins [BR:
trn04091
]
134319489 (acanb)
Proteoglycans [BR:
trn00535
]
Extracellular matrix (ECM) proteoglycans
Aggrecan / versican family
134319489 (acanb)
Glycosaminoglycan binding proteins [BR:
trn00536
]
Hyaluronan
Extracellular matrix or blood plasma proteins
134319489 (acanb)
Lectins [BR:
trn04091
]
C-Type lectins
Lecticans
134319489 (acanb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Xlink
Lectin_C
Sushi
V-set
Chordopox_A33R
I-set
Ig_CD22
ig
PGDH_inter
Ig_3
Motif
Other DBs
NCBI-GeneID:
134319489
NCBI-ProteinID:
XP_062856759
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All DBs
Position
8:complement(30552062..30572769)
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AA seq
1354 aa
AA seq
DB search
MTTLLLLCAFLSISSAAITHGDANDEDSTLRVSIPVEQPLRPLLGGKMIIPCYFQNSTVP
DPGAPPVTPLSQRIKWFYITKDQISVILVANEGFVNIQPDYLQRVTMVSYPAVSTDASIE
ISNLRSKDSGTYRCKVMQGIEDNYDSVEMQVQGIVFHYRAITGRYTLTFDKAMAACIQNS
AVLATPEQLQAAYDDGFHQCDAGWLSDRTVRYPIHVPREPCYGDKERLPGVRTYGIRDNS
ETYDVYCFAEKMSGRVFYSMSTKKFTFPEASDQCTKLGARLATTGQLHLAWKAGMDVCDA
GWLADGSVRYPINVARSQCGGGLLGVRTVFRFKNQTGFPLPDSHYDAICYEGEDDLPGPH
SPVSNVFRIPGLHSSLPNVSVSTHSHTPVPDLYMTTDSEFSVGTFTASPEIYPESATTES
EVRGEFGTQEPWETTMETPLSIPPTIVDTLIAVARAQTDLGYERQPENSNTDLESKGVVF
YYHSDSRHYAFNFEEAQRACQEQGAKIATPIQLQAAYEGGLHQCNAGWLQDQSVRYPVVF
TSKCSGDLENAPGVRSYGVKPAFDRFDVYCYIDQIKGEVFHLSSPEGFTFYEAADNCHEQ
NATLASTAELYAVWNHGFHKCSPGWLADRSVRYPVQTSRLDCGEKKTGVNTIYENQTRFP
DPFSRYDAYCIRANLSMHTSEDLLNGSWTNTDFNNTYTQPADPFIPGMSVEESGSGSSSA
DFSGQSSDGPYGKSSPSEHVSSSDLSSGVIFDSNLTSQSVSGSASSSGEMSGGGDVQGSE
IFSEGVSESGLSGDDSDIFVTLTEKPDIPSAEGSALESPQEAGEAIDVFYPSLVSNDTST
DHSGSGDMSGSSQEKSGSSGLLSGFASGDLIILVDEQNTFVTLPQPKTEQEFREGHPEES
GYSGHSGDVTNGFEFSGLHSGDVNSASGFTGLHSGDDLSGSGFSGLHSGDDLTGSGLTEH
HSGDVINGSGPSTGSTRRPLEKQELSGSSVDVSSNVSGFTSAYTSGTSGFFSHSSSRDYR
SFESGKAIFPTRDEITAIPSRPTNSSDQGRDFVESSSLDPYTENTASVPSQNNNVSGEAT
KDLPAALAYVADESPSNTRSTTLLLFTSSPDTLLGRANTVKQPNVTEAVSGCADGWEEFK
GSCYIHFSERKTWESAEQHCQELDSHLVSITSQEEQDFVNNKVADYQWIGLNDRDKQNEF
HWTDESPMAYTNWRPNQPDNYFNHDEDCVVMVWHANGQWNDVPCNYNLPFTCKSTPVKCS
APPEVENAKMLGKSEEPYLVNSIIRYQCDPGFGQRHLSVIHCMPDGRWEEPKVECIEKTT
NNRLQKRSIKRHSKTVNSQTQMFSRQDLRTTLQI
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgactactctgcttctactttgtgcattcttgagtatttcctctgcagccataacacat
ggagatgcaaatgatgaggacagcacgctaagagttagcatccctgtggagcagccatta
cgtcctctgctgggcgggaagatgatcatcccttgctacttccagaacagcacagtccct
gaccctggagcccccccagtcaccccactgtcacagcgcatcaaatggttctacatcacc
aaggaccaaattagtgtcattctggtggcaaatgagggatttgtgaacattcagccagat
tatttgcaaagggtaaccatggtgagctatcctgcagtatctacagacgcctccatagag
atctcaaatctacgttccaaagattctgggacataccggtgtaaggtcatgcagggcatt
gaggacaactacgactcagtggaaatgcaagttcaaggcattgtgttccactaccgagcc
ataaccggccgctacacactgacctttgataaggcaatggcagcctgcatccagaacagt
gctgttttagcaacccctgaacagctgcaggcagcgtacgatgacggcttccatcagtgt
gatgcaggatggctttcagaccgaactgtcaggtaccctattcatgtgcccagggagcct
tgctacggagacaaggaacgcttaccaggtgtacgaacctacggaatcagagataacagt
gaaacttatgatgtttactgctttgcagagaagatgtctggaagagtcttttactccatg
tctacaaagaagtttacctttcctgaggcatcagaccaatgcaccaagcttggagcacgt
ttggcaaccacagggcaattgcacttggcctggaaagctggaatggatgtgtgcgatgct
ggctggttggcagacgggagtgtgagataccctatcaatgttgcccggtcgcaatgcggt
gggggtctcctgggtgtacggacagtattccgttttaaaaaccagacaggttttcctctc
ccggattcacattatgatgctatttgttatgaaggagaggatgacttacccggtccacac
tccccagtgtctaatgtattcagaatcccaggcttgcacagttcactacctaatgtttct
gtaagcacacattcccacaccccagtgcctgatctttacatgactacagactctgagttc
agcgtaggaacctttactgccagccctgagatctatccagagagtgccaccactgagagt
gaagtgagaggggagtttggaactcaagagccctgggaaacaaccatggagacaccactt
tctatccctccgactattgtggacactttgattgctgtggctagagctcagactgatctg
ggctatgagaggcaaccggaaaatagcaacactgatttagaatccaaaggagtggtgttc
tattaccactcagactccaggcactatgctttcaactttgaagaggctcagagggcctgt
caggaacagggagctaaaatagccacccctatccagctgcaagcagcctatgaaggcggc
ctccatcagtgcaatgctggctggcttcaggaccagtctgtcaggtaccctgttgtgttt
acgtccaaatgctctggagatctggagaatgctcctggggttcgatcctatggggttaag
cctgcgtttgatcgctttgatgtgtattgctacattgaccaaataaagggtgaggtcttt
catcttagctccccggaaggatttaccttctatgaggcagctgataactgccacgaacag
aatgccacactggcatccactgctgagctgtatgcagtctggaatcacggcttccataag
tgtagcccaggatggctagctgatcgcagtgtccggtaccctgttcaaacaagccgtctt
gattgtggcgagaagaaaacaggtgttaacaccatatatgaaaaccagactagatttcca
gatccattctcaagatatgacgcctactgcattagagcaaatctgtcaatgcatacaagt
gaggacttgctaaatggctcatggaccaatacagattttaacaacacatacacacagcca
gctgatcctttcattcctggcatgtcagtggaggaaagtggttctggatcttcctctgct
gacttcagtggccaatccagtgacgggccatatgggaaaagttcccccagtgaacatgta
tctagtagtgacctttcaagtggggtgatatttgatagcaacttgactagtcaatctgtt
tctggaagtgcctcttcaagtggggagatgtctggaggtggtgatgttcaaggaagtgaa
atctttagtgaaggggtatctgaatctggcctgagtggagatgactcagacatctttgtc
accctcacggaaaagccagatataccctcagcagagggatctgccttagaaagtccacaa
gaggcaggagaagcaatagatgttttttatcccagcctggtatccaacgacactagtact
gaccactcagggtcaggtgatatgtcaggatccagtcaggaaaaaagtgggtccagtggt
cttttatcaggatttgctagtggagatctaatcatcttggttgatgagcaaaataccttt
gtgaccctcccacagcccaaaacagagcaggaatttagggaaggacatccagaggaaagt
ggatatagtggacacagtggtgatgtcacaaatggctttgaattcagtggactccacagt
ggggatgtcaacagcgcctctggattcactggactccatagtggtgatgacttgagtggc
tctggatttagtggccttcacagtggtgatgatttgactggctctggattaactgaacat
cacagtggtgatgtaattaatggttctggcccttcaactggttcaactagaagaccactt
gaaaagcaggagctgtctggtagttctgttgatgtgtctagtaatgtcagtgggtttacc
tctgcatacacctctggaacatctggtttttttagtcattcatcaagcagagactacaga
tcttttgagagtggaaaggccatctttcctacaagagatgagattacagcaatcccctcc
agacctacaaatagttcagaccagggtcgtgattttgttgagagcagttctttagaccct
tatacagaaaacacggcatctgtaccctcacaaaataacaatgtgagtggtgaagcaact
aaagatcttcctgcagccttggcttatgttgctgatgaatctcctagcaacaccagaagt
acaactttattacttttcacatcatctcctgacacattgctgggaagagcaaatactgtg
aagcagccgaatgttactgaagcagtgtcaggatgtgcagatggctgggaggaatttaag
ggcagctgctatatccactttagtgagagaaagacttgggagagcgctgaacagcactgt
caagagctagactctcacttggttagcattacttcacaagaggaacaggactttgttaac
aataaagttgctgactaccagtggattggacttaatgacagagacaagcaaaatgagttc
cactggacggatgagagccctatggcatatacaaactggagacccaaccagccagataat
tactttaaccatgatgaagattgtgttgtaatggtatggcacgcgaacggccaatggaat
gatgtgccctgtaactacaatctgcctttcacatgcaagagtacacctgtcaaatgctct
gcacctcctgaagtagaaaatgccaagatgttgggaaaaagcgaagaaccctacctagtc
aattccatcatccgctaccagtgtgaccctggcttcggacagcgccacctatctgtgata
cactgtatgccagatggtcgatgggaagagccaaaagttgagtgtatagaaaaaaccaca
aacaacagactacagaaaagatccatcaaaagacactcaaaaacagtcaacagtcaaaca
caaatgttctctagacaggacttaaggaccacacttcaaatctaa
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