Trichomycterus rosablanca: 134319503
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Entry
134319503 CDS
T09921
Name
(RefSeq) E3 ubiquitin-protein ligase Hakai
KO
K15685
E3 ubiquitin-protein ligase Hakai [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134319503
04131 Membrane trafficking [BR:
trn04131
]
134319503
04121 Ubiquitin system [BR:
trn04121
]
134319503
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134319503
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA processing factors
3' end processing
N6-methyltransferase complex
134319503
Membrane trafficking [BR:
trn04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
134319503
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134319503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf_Hakai
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-RING_5
zf-RING_2
AraC_N
DZR
DUF4187
Motif
Other DBs
NCBI-GeneID:
134319503
NCBI-ProteinID:
XP_062856780
LinkDB
All DBs
Position
8:30865430..30871453
Genome browser
AA seq
468 aa
AA seq
DB search
MDQNDDFQGTSGSRVLGGCDVRRRIPIKLLSKQTVRSQRPNAQSDEDSFTCKHEERLECK
FGDANRNQHRFPQQLFWDCKLNLVGEKDDTAVHFCDKCGLPIKIYGRMIPCKHVFCYDCA
VLYEKKNDKTCPGLSLYSCTDPVQRIEQCQRGTLFMCSIVQGCKRTYLSQRDLQAHINHR
HMRASKHGSSRLEHPHPNPPPTPNLTPEPLDRFRLPPPPHLPKTHPLITPPLQGHDPYGQ
PPPASPSELSSRGLPPETFRIATVTTRKHSNLITVPIYDDSGTSIPSPRDPLPQTSPGLV
PHHHPGQTVLSHPHHIMPPPQQQHYGPPPRPRPPPLPPLSHPMPGPGAPHMVYNQVPPMS
GAPPPITPPPRHIINQMPPFMNRPLPTPLPQHGALPVNAPSSHHFNPSSLPQDQGTLSPP
FTQPGALSPGMWPTARGPHPPRMQVPPAQGQRTGPHHPEQPRYRPYYQ
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
atggaccaaaatgatgattttcagggaaccagtggttcaagggtgctcgggggttgtgat
gttcggcggcggattcctattaagctactttcaaaacagactgtacgctcacagcgaccc
aatgctcagagcgatgaagattcgttcacctgtaaacatgaagaaaggcttgagtgtaaa
tttggagatgctaatagaaaccagcacagattccctcaacagttattctgggactgtaag
ctaaacctggttggtgagaaagatgacacagcagttcatttttgtgacaaatgtggactg
cctataaagatttatggacggatgattccctgtaaacatgtgttctgctatgactgtgct
gtgctttatgaaaagaagaatgataagacgtgtcctggtttgtccctgtacagctgcact
gatcctgtccagcgcatcgagcagtgccagcgtggaaccctcttcatgtgcagcatcgtg
cagggctgcaagcgcacctacctctctcagcgggacctgcaggctcacatcaaccaccga
cacatgagggcaagcaagcatggaagctcccggctcgagcatcctcatccgaaccctcct
ccaacccctaacctgactccagagccattggaccgtttccgtctgcctcctcctcctcac
ctgcctaagactcatcctctaataacaccacctttgcagggccacgacccatacggccag
ccacccccggcctctccttctgaactctcatctcgaggcctcccaccagagaccttccgc
atagccactgtgaccacacgcaaacacagcaacctcatcaccgtgcccatctacgacgac
tcaggaacctccataccctcaccacgtgaccctctccctcaaacctcgccaggtcttgtc
ccacatcatcacccaggccagacagtactgtcgcaccctcaccacatcatgcctccacct
cagcagcaacattatgggcctccacctcgacctcgacctccgcctctaccccctctcagc
catcccatgccgggacccggcgctcctcacatggtctacaaccaagtaccacctatgtct
ggtgcaccccctccaattacccctccacccagacatatcatcaatcagatgcctccattt
atgaaccgacccctgcccacacctctccctcagcatggtgcacttcctgttaatgctcca
tcttctcatcactttaaccccagctctctgccacaggatcagggcacactgagcccaccg
ttcacacagccaggtgctctaagccctggtatgtggcccacagcacgaggccctcaccct
ccacgaatgcaggttccaccggctcagggccagcggactggaccacaccacccagagcag
cctcgatatagaccctactaccaataa
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