KEGG   Trichomycterus rosablanca: 134319604
Entry
134319604         CDS       T09921                                 
Symbol
rnf4
Name
(RefSeq) RING finger protein 4
  KO
K22651  E3 ubiquitin-protein ligase RNF4 [EC:2.3.2.27]
Organism
trn  Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:trn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:trn04121]
    134319604 (rnf4)
Enzymes [BR:trn01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     134319604 (rnf4)
Ubiquitin system [BR:trn04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    134319604 (rnf4)
SSDB
Motif
Pfam: zf-C3HC4_2 zf-RING_UBOX zf-RING_2 zf-C3HC4 zf-RING_5 zf-C3HC4_3 Prok-RING_4 zf-RING_10 zf-RING_4 Hydin_ADK RING_XB3-XBAT31 zf-C3HC4_4 zf-rbx1 zf_RING_Vps8 Sina_RING zf-RING_6 zf-RING_11 TerY_C Zn_ribbon_6 Rtf2 IBR zf-Nse IBR_1 zf-UDP
Other DBs
NCBI-GeneID: 134319604
NCBI-ProteinID: XP_062856945
LinkDB
Position
8:complement(39178927..39188726)
AA seq 185 aa
MNGAAQRRRRSSSNPCSRRSSKRSRIQMSQQPVETIDMVESDRLSTEDVVDLTCEAADSA
VVDLTNNDSVVLVDDGTQSRRVQGTESYVVSSDDDEPSQSLDPVLPSSLRASSTNASYRS
TPGAVSCPVCMDVYTEIIESGRLMVSTKCGHLFCSQCIRDSLALTHSCPTCRKKLTHKQY
HPIYI
NT seq 558 nt   +upstreamnt  +downstreamnt
atgaatggtgcggctcagaggagaagacggtcgagttccaatccatgttccagacgtagc
agtaagagaagcaggatacagatgtctcagcagccggtggaaaccatcgatatggtagaa
agcgacagattaagcactgaagatgtggtggacctaacctgtgaagcagcggattcggcg
gtggttgatcttaccaacaatgattcggttgtgcttgtggacgatggtacacagagcaga
cgcgttcagggcacggagagttacgtggtgagcagtgacgacgatgagccaagtcagagt
ctcgatccggttctgccgtcgtctctacgcgccagtagtacaaacgccagttacaggtcc
acacccggtgcggtgagctgccctgtctgcatggatgtttacacagagatcatcgagagt
ggacggctcatggtgtccaccaagtgcggccacctgttctgcagccagtgcatccgcgac
tccctcgccctcacgcacagctgccccacgtgcagaaagaaactcacccataaacagtat
caccccatttacatctga

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