Trichomycterus rosablanca: 134319606
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Entry
134319606 CDS
T09921
Symbol
fmr1
Name
(RefSeq) synaptic functional regulator FMR1
KO
K15516
fragile X mental retardation protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134319606 (fmr1)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
134319606 (fmr1)
Factors involved in mRNA localization
Other mRNA localization factors
134319606 (fmr1)
mRNA cycle factors
Stress granule specific factors
134319606 (fmr1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FXMRP1_C_core
KH_9
FXMR_C2
Tudor_FRX1
KH_1
Agenet
KH_KhpA-B
Motif
Other DBs
NCBI-GeneID:
134319606
NCBI-ProteinID:
XP_062856947
LinkDB
All DBs
Position
8:40457487..40485706
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AA seq
569 aa
AA seq
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MEELAVEVRGASGAFYKALLKDVHEGTVTVTFENNWQPERQIPFHDVRFPPPPGVQREIN
ESDEVEVYSRANDKEPCGWWLAKVRMVKGEFYVIEYAACDATLNEIVTLERLRPINPNKA
TTKNTFLKITLDVPEDLRQICAKESAHKDFKKAVGAFSVSYDSEKKQLVILSVNEVTTKR
ASMMTDMHFRSLRTKMSLMLRNEEASRQLESSRQLASRFHEQFVVRDDLMGLAIGTHGAN
IQQARKVPGVTNIDLDEETCTFHIYGEDHDAVRKARSFLEFSEDVIKVPKNLVGKVIGKS
GKVIQEVVDKSGVVRVRVEPENEKKPTTLDEGMVPFVFVGTKEAISNAHLLLDYHLNYLK
EVDQLRMERLQIDEQLRQIGGGPRAPSGRPDKEKPFGSDNGMGHPRGGRPFGRGGRGRRG
PGFASGTNSEASNASETESDHREELSDWSLAPTDEESMGYNKRVPDARKRGGGGRGRGGR
GRGGYKGEDVHWSDSRPRNTRDSKPRLQEDSLQIRVDSNNERSVHTSRGPPGPAADSGPG
RQRNVKERVGIRKDKQDGADGPVVLNGVS
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggaggagctggcggtggaagtacgaggagcgagcggtgctttctacaaggctttgttg
aaggacgtgcatgaaggcacagtgaccgtcaccttcgagaacaactggcagccggagcga
cagatccccttccacgacgtccggttccctcctccgcccggagtccagagagagatcaac
gagagcgatgaggtggaggtgtactcgagggccaacgacaaggagccgtgcgggtggtgg
ctggccaaagtgcgcatggtgaagggcgagttttacgtgatcgagtacgcggcgtgcgac
gccacgctgaacgagatcgtcacgctggagcggctgcgacccatcaaccccaacaaggcc
accaccaagaacaccttcctgaagatcacactggacgtcccggaggatctgcggcagatc
tgtgctaaagaatcggcgcacaaggactttaagaaggcggtgggagcgttcagcgtctcg
tacgactccgagaagaagcagctggtgatactgtcggtcaacgaggtgacgaccaaacgg
gcgagcatgatgacggacatgcacttcaggagcctgcgcaccaagatgtcgctcatgctg
aggaacgaggaggccagtcggcagctggagagttcccgtcagttggcgtcgaggttccac
gagcagttcgtggtgcgcgatgacctgatgggtctggccatcggcacacacggtgccaac
atccagcaggcccgcaaagtgcccggggtcaccaacatcgacctggacgaggagacctgc
acctttcacatctacggagaggaccacgatgccgtgcggaaggccaggagcttcctggag
ttttcggaggatgttattaaggtgcccaaaaatttagtaggaaaggtcattgggaagagc
ggtaaggtgatccaggaggtggtggataaatccggcgtggtccgagtaagagtggaacca
gaaaacgagaagaaaccaacaacgctggacgagggcatggtgccgttcgtcttcgtcggg
acgaaggaagccatctcgaacgctcacctgctgctcgactatcatctcaactacctgaag
gaggtggatcagttgcggatggagcggctgcagatcgacgagcagctcagacagatcggc
gggggacccagagctccgtccggccggccggataaagagaagccgttcggctccgataac
ggcatgggccacccgcgagggggtagaccgttcggccgaggcgggcgaggacgacggggg
cccggcttcgcctcgggcaccaactccgaagcgtcgaacgcgtccgagaccgagtcggac
cacagagaggagctgagcgactggtctctggcccccaccgacgaagagtccatgggatac
aacaagcgagtaccggacgcacgcaagaggggcggcggaggccggggcagaggaggacga
ggacggggaggatacaaaggtgaggacgtgcactggagcgactcgcggccccggaacacc
agagactccaagccgcgccttcaggaggattcactacagattcgtgtggacagcaataac
gagaggagcgtccacaccagccgaggccccccggggcccgccgcagactccggccccggc
aggcagaggaacgtcaaggagcgagtagggatcaggaaagacaagcaggacggcgcggac
ggcccggtcgtgttgaacggcgtgtcttaa
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