Trichomycterus rosablanca: 134319623
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Entry
134319623 CDS
T09921
Symbol
ssrp1a
Name
(RefSeq) FACT complex subunit SSRP1a
KO
K09272
FACT complex subunit SSRP1/POB3
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134319623 (ssrp1a)
03036 Chromosome and associated proteins [BR:
trn03036
]
134319623 (ssrp1a)
Transcription factors [BR:
trn03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG2-related
134319623 (ssrp1a)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
FACT complex
134319623 (ssrp1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PH1_SSRP1-like
Rttp106-like_middle
SSrecog
POB3_N
HMG_box
SSRP1_C
HMG_WDHD1
HMG_box_2
FERM_C1_MyoVII
Motif
Other DBs
NCBI-GeneID:
134319623
NCBI-ProteinID:
XP_062856980
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Position
8:complement(41437008..41482942)
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AA seq
707 aa
AA seq
DB search
MGDTLEFNEIYQEVKGCWNDGRLRFSKQSVVYKSSKTGKVDSISAPDLSLAQWRRVCLGH
GIKLATSNGHVYKYDGFKDTDFEKISAFFKANYKVELSDKDMCVRGWNWGTAKFSGPLLS
FDVNDNPAFEIPLASVSQCTTGKNEVTLEFHQNDDAEVSLMEVRFYVPPSTGDDGTDPVE
VFSQNVLSQADVIQATGDAVCIFKELQCLTPRGRYDIRIYPTFLHLHGKTFDYKIPYTTV
LRLFLLPHKDQRQMFFVISLDPPIKQGQTRYHFLILLFSKDEDVNLTLSMSEEEVEKRFE
GKLSKHMSGSLYEMVSRVMKALVNRKITVPGNFQGHSGAQCITCSYKASSGLLYPLERGF
IYVHKPPVHLRFEEISCVNFARGTTTTRSFDFEIETKQGNQYTFSSIEREEYGKLFDFVN
AKKLSIKNRGLKEEMKKKSEGYSDSDEDEHDAYLERMKEEGKIREEGDDSDEGDSDESFN
PGEEEDEVAEEYDSNASVSESEGEDGDSEGEGKKKKAEKKPKKPAKEKKERKPRKEKKVK
DAAAPKRPMSAYMLWLNANRERIKSENPGISVTEISKKAGEMWKQLDKSRKEEWDKKAEE
AKKQYDTAMKEYKESGGGASSAPVKEKKKGGKAEEKKRKASAEQEKEKERGANESFKSKE
FISSEESSSDSDSGKAKGKKRKADEEEEDEEEVASTPPSSEDESGSD
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atgggagacacactggagttcaacgagatctatcaggaggtgaaaggatgctggaacgac
gggcggctgaggtttagcaaacagtctgtggtctacaaaagcagcaagacgggaaaggtg
gacagtatttctgctcctgacctgtctctcgcccagtggcggcgcgtctgtctcggccac
gggatcaaactggccacgagtaacgggcacgtctacaaatacgatggatttaaagacacg
gattttgagaaaatctcggcgttttttaaagcgaactacaaggtggagctgtccgacaag
gacatgtgtgtgaggggatggaactggggcacagctaaattttcagggccgctgttgtcg
ttcgacgttaacgataacccggcgtttgaaatccctctggccagcgtctctcagtgcaca
acaggaaagaacgaggtgacgctggagttccatcagaacgacgatgccgaggtgtcgctc
atggaggtccgtttttacgtcccgccctccaccggagacgacggcaccgaccccgtcgag
gtcttctctcagaacgttctctctcaggctgatgttattcaggctactggagatgctgtg
tgtatcttcaaagagctgcagtgccttacgcccagaggaaggtatgacattcgtatctat
cccacctttctgcacctgcacggcaaaaccttcgactataagatcccctacaccacggtc
ctgcgtctcttcctgctgccgcacaaggaccagaggcagatgttcttcgtgatcagtctg
gatccacctattaaacagggtcaaacccgctaccacttcctcatcctcctcttctccaag
gatgaagatgttaacctgacgctcagcatgagcgaggaggaggtggagaagcgcttcgag
ggaaagctgagtaagcacatgtccggctctctgtacgagatggtgagcagggtgatgaaa
gctctggtgaacaggaagatcacggtgccaggaaacttccaggggcactcgggcgctcag
tgcatcacctgctcgtacaaggccagctcggggctcctgtatcctctggagaggggcttc
atctacgtccacaagccccccgtgcatctgcgctttgaggagatctcctgcgtcaacttc
gcccgaggcaccaccaccacgcgctccttcgacttcgagatcgagaccaagcagggcaac
cagtacaccttcagcagcattgagagggaagaatacggcaagctcttcgacttcgttaat
gccaagaagctgagcataaagaaccgaggattaaaggaggaaatgaaaaaaaagtccgag
ggctacagcgattccgacgaggacgagcacgatgcctatctggagaggatgaaggaggag
ggcaagatccgcgaggagggcgacgactccgacgagggagacagcgacgagtccttcaat
cctggagaggaggaggacgaggtggctgaggagtacgacagtaacgcctcggtgagcgag
agcgaaggggaagacggcgacagcgagggcgaagggaagaagaaaaaggcggagaagaaa
cccaagaagccggcgaaggagaagaaagagaggaaaccacggaaggagaaaaaggtgaag
gacgcagccgctcctaagagacccatgagcgcgtacatgctctggctgaacgcgaacaga
gagcggatcaagtctgagaatcccggaatctcggtcactgagatatccaagaaggccgga
gagatgtggaaacagctggacaagagccgcaaagaggagtgggacaagaaggccgaggag
gctaaaaaacagtacgacacagcgatgaaggaatataaggagagcggtggaggggcgtcg
tccgctcccgtcaaggagaagaagaaaggcgggaaagccgaggagaagaagaggaaggcg
tcggcggagcaggagaaggagaaggagcgaggagcgaacgagagctttaagagtaaagag
ttcatctccagcgaggagagctcgtccgactccgactcggggaaggccaaaggaaagaaa
cgcaaggctgatgaggaggaggaggacgaggaggaagtcgcatccacaccacccagctca
gaagacgagtcgggctcagattaa
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