KEGG   Trichomycterus rosablanca: 134319646
Entry
134319646         CDS       T09921                                 
Symbol
pcdh20
Name
(RefSeq) protocadherin-20
  KO
K16498  protocadherin delta 1
Organism
trn  Trichomycterus rosablanca
Pathway
trn03273  Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03273 Virion - Lassa virus and SFTS virus
    134319646 (pcdh20)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:trn01009]
    134319646 (pcdh20)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:trn04515]
    134319646 (pcdh20)
Protein phosphatases and associated proteins [BR:trn01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     134319646 (pcdh20)
Cell adhesion molecules [BR:trn04515]
 Cadherins
  Protocadherins
   134319646 (pcdh20)
SSDB
Motif
Pfam: Cadherin Cadherin_2 DUF4992
Other DBs
NCBI-GeneID: 134319646
NCBI-ProteinID: XP_062857009
LinkDB
Position
8:complement(2238831..2243160)
AA seq 843 aa
MNLASLLQVLLVAFVRQIVCQLPSPFSTPEEQTDGIKIGALGGAYPPPYLLLGSVYLRVD
EETGDVYTTEQKMDREALCPSQDGGYCTITADALVGPEQDMVKITVIVEDINDKAPHFET
NEIRLKIPESAVVGTRVLLEEKAWDEDIGSNAEIRYHLEGAGGFFSVAQDGDDLELVVER
GLDRETQDEHRMLLVAVDGGRAALSGTASLIITVLDVDDNCPQFSPENPKNVTVPAGATK
DTPVAHVMTVDPDLATNSQITYSFSPLISDRAKELFYLDQATGWISLDMDVRLYSLEEHI
LKVVMTSTSCPTEQTQLTVYLLPLELQKPSIEIKFLAEFKNQTILIRENEPPTVLAILTP
RDTSSPPGVQKVLYLENKSTAFILKAQADSYLLSTSKPLDFELCSDYQISVVISDPGRKH
VLGSEVIKVAVQDVNDNVPRFEKQNYQVEIEENNEPGVSLIQVRASDADSQLDGKVAYLL
IYSMPAFFSVNKETGVLSVLESLDREQQGAYTLTVLARDHGSPPLEALAYVSIKVLDQND
NSPTFVPPRFIFFISESILKLAHVGKIGVFDADEGENGTVVDVQVVNQDVPFAVDFTHMV
LRCTAEVDREKQDRYELLLQAIDGGNPRRSSSASVTVFIEDVNDNQPEVILPNSNFSCLT
VPPSTKAGSIITKIYAIDHDSGVNSDITYHMMPSQPAQSSPFRIDPRSGNITLVQPLVIG
DYGMHHLYIRVSDGGKPVPLQTAVWINVLVNETSEECHLTSVPQYLDSQPHPTPTTAEFK
PSTSCTDQSWFILLCGLGMMAFSVFTLLASAVVCLRHRNMMRRRQTEKEQDYITEMDPLK
DRK
NT seq 2532 nt   +upstreamnt  +downstreamnt
atgaacttagcctctctgttacaggtgcttctggtggcattcgtcaggcagatcgtatgc
cagctcccgtcacctttctcgacgcccgaggagcagacagacggaatcaagataggcgcc
ctaggtggagcctaccctcctccatacctgctgctcggcagcgtctacttaagagtggat
gaggaaacgggggacgtgtacacgacagagcagaaaatggacagagaggccttgtgtcca
tcgcaggacggtgggtactgtaccataacggctgatgcgttagtgggacctgagcaggac
atggtcaagataactgtcatcgtagaggatattaatgacaaagctcctcattttgagaca
aatgaaatacggttgaagatcccagagagcgcagtcgtggggaccagggtgctcctggag
gagaaggcttgggacgaggacataggcagcaatgctgagataaggtatcacttagaagga
gctggaggattcttcagcgtggcgcaggatggagacgatcttgagctagtcgttgaacga
gggctggatcgcgagactcaagatgagcaccggatgcttctagtggccgttgacggtggc
agagcggccctaagtggcacagcctctcttatcatcacagtcctggatgttgatgataat
tgcccgcagtttagccctgaaaacccgaaaaatgtgaccgtgccagctggagcaaccaag
gacacgcctgtggctcatgtcatgaccgtagacccagacctggctacgaatagccaaatc
acgtactccttcagtcccctgatctctgaccgggccaaggagcttttctacctggaccaa
gccacagggtggatcagtttagatatggacgtgaggttatacagcctggaggaacacata
ctaaaagtggtcatgacgagcacgtcatgccccactgaacaaactcagctgactgtttac
ctgctgccgctggaactccaaaagccctctattgaaattaagtttctggctgagtttaaa
aaccaaacaatactgatccgtgagaatgagccccctaccgtcttggccattctgacacct
cgggacacctcatcgccgcctggcgtccaaaaggttctgtacttagagaacaaaagcaca
gcgttcattttgaaagcgcaagcagacagctatctgttgtcaacatcaaagcctctcgat
ttcgagctgtgcagcgactatcagatttccgtggttataagtgatcccgggagaaaacac
gtcctcgggagcgaagtgatcaaagtggcggtgcaagacgtgaacgataacgtgccgcgg
ttcgaaaagcagaactatcaggtagagattgaggagaacaatgagcccggcgtgtcttta
attcaagtcagggcgtctgacgccgacagccagctcgacggcaaagtggcatatttgctg
atctattccatgcccgctttctttagcgttaacaaagagacaggagtgctatcggtgctg
gagtctttggacagggagcagcagggggcgtacactttaacagtcctggccagggaccac
ggttctcctccgttggaagccttggcctacgtctcaatcaaagtccttgaccagaatgac
aacagcccaaccttcgtcccaccacgcttcatattttttatttctgaaagcattttgaaa
ttagcacatgttggaaaaattggcgtcttcgatgcagacgagggtgaaaacgggacggtc
gtggacgtccaagtggtcaatcaggatgtcccctttgccgtggattttactcacatggtg
ctccgctgcacggccgaggtggaccgagagaagcaggaccgttatgagctgttattacag
gccatagatggtggcaatccccgccgctcctcgagcgcctccgtgaccgttttcatcgag
gacgtgaacgacaatcaacccgaggtcattcttcccaacagtaacttctcctgcctgacc
gtacctcccagcaccaaagctggaagcatcatcaccaagatctacgccatcgaccacgac
tcgggcgtaaactcggacatcacgtaccacatgatgcccagccagccggctcagtccagc
cctttccgaatcgacccgcggtcagggaacatcacacttgtccaacccctcgtgatcggc
gactacggtatgcaccacctctacatcagagtcagcgacggaggcaaacccgtccccctt
cagaccgccgtgtggattaacgtgctggtcaacgagacgtccgaagagtgccacctcacc
agcgttccccagtatttagactcgcagccccatccgacgccaacgacggcagaatttaag
ccgagcacgagctgtacggaccagtcgtggttcattttgctctgcggtttgggcatgatg
gcattttcggtcttcacgcttctggcgtctgcagtggtctgcctcagacacagaaatatg
atgaggaggagacagactgagaaggaacaggattatatcactgaaatggatcctttaaag
gacagaaaatga

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