Trichomycterus rosablanca: 134319678
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Entry
134319678 CDS
T09921
Name
(RefSeq) E3 SUMO-protein ligase ZBED1-like
KO
K24637
zinc finger BED domain-containing protein 1 (E3 SUMO-protein ligase ZBED1) [EC:2.3.2.-]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134319678
04121 Ubiquitin system [BR:
trn04121
]
134319678
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys2His2 BED
134319678
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
134319678
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
hAT-like_RNase-H
Linker_histone
DBD_Tnp_Hermes
Motif
Other DBs
NCBI-GeneID:
134319678
NCBI-ProteinID:
XP_062857042
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Position
8:11301981..11303723
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AA seq
484 aa
AA seq
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MIRHYRAKHENKQDNTVDRKHELDEALVNFLVRDSQAFTIVDDPGFKEFVAKLDPTYTLP
SRQALKKMVEEKYEEEKAKAKAQLQSVERVSLTSDIWTSMNMDAYLAVTCHCVLDNMKMD
TLLLGVLPFPQDHSAENIAAALMSLVVEWGLEGKVQCLVTDAAANMLCTAKKLAMRHIVC
IAHALNLVVKKSLDQTPGLEELRSKARKVVTYFRSSTTGKEKLKHVQQQMNCAVMKLIQE
VDTRWNSTFLMLQRLYDERQTVGAALASLKTDVHPLSSEEYETIAACLQVLSPFYAATVE
LSQEKRVSGSMVIPLVKMLFQATQEVILKTTNVTATLLGRNITATLINKFDNLESSTLVS
LATLLDPRFKAIGFHSPEKAQNAARKLTAECAALVRQTRVETLSDHSPQPATSAQNTSSS
ASNLWSSFDRDAALARAHRNHTSDATIEVQRYLSDPPLQRSDDPLAYWNEHKNPEKLSAK
KEIG
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgattaggcactacagagccaagcatgaaaacaagcaggacaacactgtggaccgaaag
catgagctggatgaggctttggtaaattttctggtgagggattctcaggcttttaccatt
gtggatgatccaggcttcaaggagtttgtggcaaagcttgaccccacatacactctgccc
tccagacaggctctgaagaagatggtggaggaaaaatatgaggaggagaaggccaaagcc
aaggctcaactgcagagtgtggagagagtgagcctgacctctgatatatggacctccatg
aatatggatgcctatctggcagtaacttgtcattgtgtcctggataatatgaagatggac
actttacttttaggagtgctgcctttcccccaagaccacagtgctgaaaacattgcagct
gctctgatgtctctggtagtggagtggggacttgaggggaaggttcaatgcctggtgact
gatgctgctgcaaacatgctctgcactgcaaaaaaactagccatgcgacatattgtttgc
attgcacatgcgttaaatttggttgttaaaaagtccctggatcaaacgcctggcctagaa
gaactgcgttcaaaggcacgaaaagtggtgacctattttaggtcaagcactaccggaaaa
gaaaaactgaaacatgtgcaacagcaaatgaactgtgcagtgatgaagctaattcaggag
gtggatacacgctggaacagcacctttttgatgttgcagcgcttgtatgatgagagacag
acagtcggggcagctctggcatcacttaagacagatgttcatcctctctcttctgaggaa
tatgaaacaatcgcagcatgtctccaagtgctttccccgttctatgcagcaactgtggaa
ctgtcccaggagaagagagtgtcaggttcaatggtgattccacttgtaaagatgttattt
caagcaacccaggaagtaatactaaagaccacaaatgtaacagcaacacttcttggacgg
aatatcactgcaaccctcataaataagtttgataaccttgagagctcaacactcgtgtca
cttgccacactgttggatccaagatttaaagccattggatttcacagtccagaaaaggcc
caaaatgctgcacggaaacttacagctgaatgtgcagcactggtcaggcagacacgagtg
gagactttatcagatcattcacctcaaccagcaacaagtgcacaaaatacatcctcctca
gcttccaacctttggtcaagttttgatcgagatgctgcactggcaagagctcacaggaat
catacatcagatgccacaattgaagttcagagatacttgtctgatcctcccttgcaaaga
tcagatgatccactggcctactggaatgagcacaaaaatccggagaagttgtcagcaaaa
aaagaaatcggctaa
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