Trichomycterus rosablanca: 134319747
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Entry
134319747 CDS
T09921
Name
(RefSeq) macrophage colony-stimulating factor 1 receptor-like
KO
K05090
macrophage colony-stimulating factor 1 receptor [EC:
2.7.10.1
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04010
MAPK signaling pathway
trn04060
Cytokine-cytokine receptor interaction
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
134319747
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
134319747
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
trn01001
]
134319747
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
trn04090
]
134319747
Enzymes [BR:
trn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
134319747
Protein kinases [BR:
trn01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
134319747
CD molecules [BR:
trn04090
]
Proteins
134319747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
C2-set_2
C2-set_3
MGC-24
Ig_4
VEGFR1-3_N_Ig-like
Ig_VEGFR-1-like_5th
Motif
Other DBs
NCBI-GeneID:
134319747
NCBI-ProteinID:
XP_062857069
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All DBs
Position
1:23225869..23250761
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AA seq
970 aa
AA seq
DB search
MILLTFILGLLSHQAQGLFQPLIRVNHKDLVESDVVLDSGSRLVLTCEGEQPVKWVPRLT
KHKRYSRSTGNKCTFSVESATAEFTGTYKCVGKETSDFSSVHVFVKDPNILFVTPLSSLR
FIKKEGEDALLPCLLTDPSATNIHLRMKNGNPPPAGMNVTIYPKKGVLIQSLHPKYNAEY
VCSASVRGAEKVSSTFSITVVPRPSFPPSVALKDKDFVRLLGEQLQIICYTHNPTSNYNI
TWKHSSNVELPSPVEKPEMQGERFSISSKLTLPAVSLAHSGNITCTGANEAGVNTSTTSL
LVVEEPYLRLSPVISPLLTQNGLSIDVHEGEDVKLQLNIEAYPPITVQQWEGPTFPNSSQ
PETRFISHNNRYEAMLFLKRLNSKEQGRYTFYANSSMTSASITFSIQTYQKPVVGVKRKN
ESYLTCTAFGYPAPRIDWYKCQGTRQTCRENSTSDTHPLVPVQTVTVQTDKFEPVKVESV
LTITPSNEKMTVECVAHNLLGESSDTFPVDQSEKLFTASLAGSLGVMVFLLLLLIFLLYK
YKQKPKYEIRWKIIEATDGNNYTFIDPTQLPYNEKWEFPRDKLKLGKILGSGAFGKVVEA
TAYGMGKDDNITRVAVKMLKGSARSDEKEALMSELKILSHIGEHENIVNLLGACTYGGPV
LVITEYCCHGDLLNFLRSEAESFLNCVVKIPDITEEISNYKNVMTEKMFVRSDSGISSTC
SDSYLDMKPLTARSVQTKRASYCKDQIEDSWPLNMDDLLRFSYQVSQGLEFLAAKNCIHR
DVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKWMAPESIFECVYTVQSD
VWSYGILLWEIFSLGKSPYPNILVDSKFYKMIKSGYQMSRPDFAPPEMYTIMKMCWNLEP
TERPTFSKISQLIERLLEDTPDETQYKNTHSEVLDEEQLETCDPAKGNEDSCEHEEEEQP
LMKANNYQFC
NT seq
2913 nt
NT seq
+upstream
nt +downstream
nt
atgatacttcttacctttattttgggactgttgtcccatcaggcacaaggtttgttccag
cctctgattagagtaaaccacaaagatctggttgaatcagacgtggttctagactctggt
tctcgacttgttttgacttgtgagggtgagcagcctgtaaagtgggtacctcggctaact
aaacacaaacgctacagcaggtctactggaaacaaatgcaccttcagtgtggaaagtgca
actgctgagttcacaggcacttataagtgtgttggcaaggaaacctcagacttctcatct
gtgcacgtgtttgtaaaagatccaaacattttgttcgtgactccactctcatctctgcgg
tttattaagaaggaaggggaagatgccctcctgccttgtcttctcactgatcctagtgct
actaacatccatctccgaatgaaaaatgggaatcctcctcctgctggcatgaatgtcacg
atttaccccaaaaaaggggtgctaatccagagtcttcaccctaagtacaatgctgaatat
gtatgtagtgcctcagtaagaggcgcggagaaagtgtcttcaaccttcagcatcaccgtc
gtccctcgaccctcttttccaccctctgtagccctgaaggacaaagattttgtgagactt
cttggggaacaactgcaaattatttgttacacccacaacccaacctctaactacaacatc
acctggaaacactcatctaatgtggagttaccttccccagtggagaaacctgaaatgcag
ggtgagagattttccatcagtagtaagctgaccctgcctgcagttagcctggcgcactca
ggtaacattacctgtactggagctaatgaagctggagtcaacacatcaaccacaagtctg
ctggttgttgaggaaccatacctaagactgtcccctgtaatatcccccctcctgacccaa
aatggtctgtccattgatgttcacgagggcgaggatgtaaaactgcagttaaacatagag
gcctatccaccaatcacagtgcaacagtgggagggtccaacatttcccaacagctcccaa
cccgaaaccaggttcatcagccataacaacaggtatgaggcaatgctgtttctgaagaga
ttaaactccaaggagcagggcagatacacattttatgctaacagtagcatgaccagcgct
tccataacattttccatccagacatatcaaaagccagtagttggggtgaagaggaaaaat
gaaagctatctgacatgcacagcgtttggctaccctgctcccagaatcgactggtacaag
tgccaaggaaccaggcaaacttgtagagagaactccacatcagatactcatcctctagtc
ccagtacagacggtcacagtgcagacggacaaatttgagccagtcaaagtggaaagtgtt
ttaaccatcacaccatccaatgagaagatgactgtggagtgtgttgcacataatcttctt
ggtgaaagcagtgatacatttccagtagaccagtccgaaaaactgtttactgcttcactt
gctggatcactaggtgtaatggtcttcttattactgctcctcatctttctcctgtataaa
tacaaacagaaacccaaatatgaaattagatggaagatcattgaagctacagatggaaac
aactacacattcatcgaccccacccagcttccttataatgaaaaatgggaatttcccaga
gataaactaaaacttgggaagattttgggttctggagcatttggtaaagtagtggaggct
acagcatatggtatggggaaagatgacaatataactcgtgtggctgttaaaatgctcaaa
ggcagtgctcgttcagatgagaaggaagctttgatgtcagaactgaagatactgagccat
attggggagcatgagaatattgtaaacctgctgggagcctgcacatatggaggtcctgtg
ctggtcatcactgaatactgttgccatggtgacctcttgaacttcctgcgaagtgaagcg
gagagcttcttaaactgtgtggtgaaaatcccggatatcacagaggagataagcaactat
aagaacgtcatgactgagaagatgtttgttagaagtgacagtgggatttccagcacgtgt
tcagacagttacttggatatgaaacctctaacagccagatctgttcagactaaacgtgcc
tcttactgtaaggatcagattgaagactcatggccgttaaatatggacgacctgctaaga
ttctcataccaggtttctcagggccttgagttccttgcagctaaaaattgtatccacaga
gatgttgcagccaggaatgttctcctgacagatggacgtgtggcaaaaatctgtgacttt
gggctggctcgtgatattatgaatgattcaaactacgtggttaagggaaatgctcgtttg
ccggtgaagtggatggctccagagagcatctttgagtgtgtgtatacagtacagagtgac
gtctggtcctatggtattctgttgtgggagatcttctcactgggtaaaagcccatatcca
aatatcctggtggattccaagttctataagatgataaagtctggctatcaaatgtcccgc
cctgattttgccccaccagagatgtacactattatgaaaatgtgctggaaccttgagccc
actgaacgaccgactttcagcaagatcagtcagctcatcgagagactgcttgaagacaca
ccagatgagactcagtacaagaatacgcattcagaagtactggatgaagagcagctggag
acatgtgaccccgccaaaggtaatgaagattcatgcgagcatgaggaagaggagcagcca
ctgatgaaagctaacaactaccagttctgctga
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