Trichomycterus rosablanca: 134319998
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Entry
134319998 CDS
T09921
Symbol
si:dkey-183n20.15
Name
(RefSeq) RING-HC_RNF170 domain-containing protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134319998 (si:dkey-183n20.15)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134319998 (si:dkey-183n20.15)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134319998 (si:dkey-183n20.15)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_4
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_3
DUF1232
zf-C3HC4_2
zf-RING_2
zf-RING_5
Bac_rhodopsin
TRAF3_RING
zf-Nse
Motif
Other DBs
NCBI-GeneID:
134319998
NCBI-ProteinID:
XP_062857348
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All DBs
Position
9:24087734..24102557
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AA seq
205 aa
AA seq
DB search
MDKKEDHSQLGISGCNMDLHCPVCLHISTFPVKTNCGHQFCAPCLISYWKHSRWLDAISC
PLCRQKVSIMYHLFHENRTDRKGGEVLSNITDYNRRYSGAPRKVCDYLCDAPLFLLLLFR
ALGNMGGLVWLFLLRVALCGFGAAASLVSPLEAIPGPFSWALGLLDDLVVVFLLLISIIN
IQQQMVPERTARTHTEAQGILSDTL
NT seq
618 nt
NT seq
+upstream
nt +downstream
nt
atggataagaaagaggatcactctcaactgggaatatctggctgcaacatggaccttcac
tgtcctgtatgtttacacatatctacctttcctgtgaagactaattgtgggcatcaattc
tgtgcaccatgtcttatatcttactggaaacacagtcgctggttagacgccattagctgt
cctttgtgcagacagaaggtgagcataatgtatcatctttttcatgagaacagaacagac
aggaaagggggagaggtactgagcaacattacagattataatagacgctattctggagct
ccacgaaaagtttgcgattacctgtgtgatgctccacttttcctgctgttgctgttccgg
gccttgggaaacatgggtggtttagtatggctctttctgctaagagtagccctgtgtggg
tttggggcagctgcatcccttgtgtccccgttagaagccatacctggaccctttagttgg
gcattggggcttttagatgacctagtggtggtctttctcctgctcatttccatcatcaac
attcaacagcagatggtgccagagaggacagcccgaacacacacggaagctcaaggaata
ctgtctgacacgctttga
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