Trichomycterus rosablanca: 134320030
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Entry
134320030 CDS
T09921
Symbol
dsg2.1
Name
(RefSeq) desmoglein-2.1
KO
K07597
desmoglein 2
Organism
trn
Trichomycterus rosablanca
Pathway
trn04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
134320030 (dsg2.1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134320030 (dsg2.1)
Cell adhesion molecules [BR:
trn04515
]
Cadherins
Major cadherins
134320030 (dsg2.1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Fibulin_C
RibLong
Motif
Other DBs
NCBI-GeneID:
134320030
NCBI-ProteinID:
XP_062857387
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Position
9:complement(27621599..27641983)
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AA seq
1153 aa
AA seq
DB search
MARRFAPLGFLFCFILWCVYETGASTGQSVSLRRHKREWIVPPRVLEENVDYTKEPFIAR
IRSDKEDEMKGLVKYSLKGVGVDQPPYNLFVVDHFTGNVRVTQILDREQIAQYNLSGAAT
FYNGTLAETDIQLRIKVKDQNDNAPIFSSISPGTVPELSGVGTVVMKIAATDADEPGNPN
SQIFYEIIDQQPPGKRMFTVNSKGEVLVNDPNLDRETIDQYILTVKASDLNGAAGCNTGT
ATFKVLVSDVNDNVPTLEKDSYEGSIEENTADVEVMRLKANDLDEANTNNSLAKFEIISG
NSGGHFRIYTDPKTNEGVLVLTKAVDYEEVKDMNLGIVVNNEAAYHPSVSGAGQEVGVNI
GGAGAGAGAGAGAGAGAGAGAGAGTGTGTSSSSGSGYSIGGAGGAGLKGGKVYNMNIKVK
NQPEGPRFNPKVKAIPISEDGKMVDITKVLTRYNAIDGDTGLPAERVTYVKGSDKDSWLT
IDEKTGDIKLNKIPDRESPYLVNGTYMAEILCISQDMPTKTATGTIAIQVEDFNDHCPTL
TSQKQIMCTDQEAIYVTAVDHDFFPNSAPFKFNIIHEESTGKWELEHFNDTTAVLKALSP
IWPGPYKVTVEVQDQQGQACPDHQVVNLDVCTCEKQGVCGNRGVHQKGATLGAAGIGLLL
LGLLMLLLIPLLLMACSCGAGGMGGFAEMNVDTKEHLMSYNTEGQGEDRDVPMLSDMDGM
MNYSTKGGGFGAGAGYEAGAGYGAATYGGTMAGMGATYMASMNGINRGGQMEMISMDQGM
AGGLGMMRGEYDSGIALSDDFLYHYYSEKSQMVDGTADNYNLQYEYEGQGSPAGSVGCCS
MLESENDLEFLKDLGPKFTTLAEICGGTRITTAASTPLPPPPKPDELLMNSESMSIQAST
SNVVNHAAQAVSSSTSLHTEENMLVTNNHAQTRVDVMPAQTLMVQQQQPMYYMLEPQVSN
TVLLAERPAMGLTQGGMYVLNGAPMAETVLVQGTVPAHSTIAGGDRVMLVETHGGPGQAI
NTGMLQSTQLSGSQLLLVDRGAQGGQVFHGTLPNGGIAGSQGMFLIDGQGGGSLKSSITA
PAGSVHVVERQQRGPSVITHGSLPPGMVPSAGLQNGTFGISMSSVNEYPSAQKVVRQEKK
VVSSQKSSVTMGK
NT seq
3462 nt
NT seq
+upstream
nt +downstream
nt
atggcccggcgttttgcgccgcttggttttcttttttgcttcattttatggtgtgtgtat
gaaactggggccagcacaggccagtctgtttcccttcgaaggcacaaaagagaatggatc
gtcccaccgagagttctggaagagaatgtggactataccaaagagccctttattgcaaga
atccgctcagacaaggaagatgagatgaagggcttagtgaaatattccttaaagggtgtc
ggtgtggaccaacccccgtacaacttgtttgtggtggaccatttcactggcaacgttcga
gtaactcagatcctggacagagagcaaattgcccagtacaatctttctggagctgctact
ttttataatggcacacttgcagagacagatatccagctgaggataaaggttaaagatcag
aatgataacgcgccaatcttttcttccatcagccccggcactgtacctgaactcagtggt
gtaggtaccgtggtgatgaaaattgcggccaccgatgctgacgaacccggcaaccccaat
tctcagatcttttatgagattatagaccagcagcctccaggaaaaaggatgtttacggtc
aattcgaaaggagaagtcctggttaatgatcctaacctagacagagagacaattgatcag
tacatactcaccgtgaaagcctcagacctcaatggagcggcaggttgcaacacagggacg
gcaacattcaaggttctggtctcggatgtcaacgataacgttccaacactggagaaagac
tcttatgagggcagtattgaggaaaacaccgcggacgtcgaggtgatgagactcaaagcc
aacgatctggacgaggcgaacactaacaactctctggctaagtttgaaattatctccggc
aattcaggtggacatttcaggatttacaccgatccgaagaccaatgagggagtcttggtg
ctcaccaaggctgtggattatgaggaggttaaagacatgaatctgggcattgttgtaaac
aatgaagctgcatatcacccttcagtgtctggggctggacaggaagtgggcgtgaatatt
ggaggagctggtgcaggggctggtgctggtgctggtgcaggtgcaggtgcaggtgctggt
gcaggtgctggaactggaactggaacatcatcgtccagcggatcaggctattcgatcgga
ggagcaggtggcgccggattaaaaggtggtaaagtctacaatatgaacatcaaagtaaaa
aaccagccggagggccctcgcttcaatcccaaagtgaaagcaattcccatttctgaagat
ggcaagatggtggacataacaaaagtactcacaaggtacaatgctattgatggagatacc
ggattgcctgctgagagggtcacatatgttaaaggttctgacaaagacagctggctgacc
attgatgagaaaaccggtgacattaaattgaacaagattccagatcgagagtctccatac
ctggtcaatggaacttacatggctgagatcctctgcatcagtcaagacatgcccactaag
acggctacaggcaccattgcaatccaggtggaagactttaatgaccactgccccactctg
accagtcagaagcagatcatgtgcactgatcaggaagcaatatacgtcactgctgtggac
cacgacttctttccaaactcggctccttttaagtttaacatcattcatgaggagagtaca
ggaaaatgggaattggagcactttaatgataccacagccgttttaaaggctctctcacct
atatggccgggcccttacaaggtgacagtggaggtgcaggaccagcaggggcaggcatgt
ccagaccaccaggtggtaaacctggatgtgtgcacatgtgaaaagcagggagtgtgcgga
aaccgaggggttcaccagaagggcgcaacactaggagctgctgggattggcctgcttctt
ctgggacttctcatgcttttacttatcccactcttgctgatggcctgttcgtgtggagct
ggaggcatggggggttttgccgagatgaacgttgatactaaagagcacctgatgtcatat
aatacagaagggcagggagaagaccgggatgtgcccatgctctctgatatggatgggatg
atgaactatagtacaaaaggaggtggctttggggcaggagctggctatgaagcaggagct
ggctatggggcagctacttatggaggtaccatggctggaatgggcgctacttacatggca
tccatgaacggcataaacaggggtggtcaaatggaaatgatttctatggatcaggggatg
gctggtggccttggaatgatgagaggggagtatgacagcggaatagccctttcagatgac
ttcttgtatcactactactcagagaagagccagatggtggatggcaccgccgataactat
aatttgcaatatgaatatgaaggccaaggctcgcctgctggatctgtgggctgctgcagt
atgctggaatccgaaaacgatctggagtttctcaaagacctggggccaaagtttaccacc
ctggctgagatctgcggtggcacaaggatcaccacggctgcctcgacacctcttcctcct
cctccaaaacctgatgaactcctcatgaactccgaatcgatgtccatccaagccagcacc
agcaacgttgtcaaccatgctgcccaagctgtatcctcctccacctctctgcatacagag
gagaacatgctagttacaaacaaccatgctcagactcgtgtcgacgtcatgcccgcccag
acactgatggtgcagcaacagcagcctatgtattacatgttggagccacaggtctctaac
actgtgcttctggccgagaggcccgcgatgggactcacccagggggggatgtacgtgctg
aacggagctccgatggctgaaaccgttctggttcagggtaccgttcctgctcatagtacg
atcgctggaggagatagagtgatgttggtggaaacacatggaggacccggccaggctata
aacacaggcatgcttcagtcgactcagttgtccggatcgcagctgttgctggtggataga
ggcgcccagggcggccaggtcttccatggaacgctgccaaatgggggcatcgccggatct
caaggcatgtttctgattgatgggcaaggaggcggatcgctgaaaagcagcattactgcc
cccgcagggtctgtgcatgttgtagagaggcagcagagaggcccgtcagtaatcacccat
gggtccttgccgccgggcatggtccccagtgcagggttacagaatggcacttttggaatt
agcatgagctctgtaaacgaatatcccagcgcacaaaaagtcgtaaggcaggaaaagaaa
gttgtgtcatctcagaagagctctgtaacgatgggtaaataa
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