Trichomycterus rosablanca: 134320032
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Entry
134320032 CDS
T09921
Symbol
cdh2
Name
(RefSeq) cadherin-2
KO
K06736
cadherin 2, type 1, N-cadherin
Organism
trn
Trichomycterus rosablanca
Pathway
trn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134320032 (cdh2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
trn03036
]
134320032 (cdh2)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134320032 (cdh2)
04090 CD molecules [BR:
trn04090
]
134320032 (cdh2)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Centrosome formation proteins
Other centriole associated proteins
134320032 (cdh2)
Cell adhesion molecules [BR:
trn04515
]
Cadherins
Major cadherins
134320032 (cdh2)
CD molecules [BR:
trn04090
]
Proteins
134320032 (cdh2)
BRITE hierarchy
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
DUF2304
Herpes_LAMP2
Motif
Other DBs
NCBI-GeneID:
134320032
NCBI-ProteinID:
XP_062857389
LinkDB
All DBs
Position
9:28105065..28178949
Genome browser
AA seq
896 aa
AA seq
DB search
MHCTGGAMLTLLAALQLVVHGEETMLCQPGFTQQEYSVIVSDVIPEGQALLKVSFTDCGR
GSGLRFETGDPDDFRIGEDGTLYAKRTLRVSERNSRGLEIRAKNLNSEEEWSTRVTFTLP
DSPKQVPEIVFPWRSNVVGGDGSVSRVKRDWVIPPINVPENSRGQFPEELVKIRSDRDKI
NTLRYSVTGPGADQSPTGLFIIDPITGQLSVTKPLDREQISNFHLRAHAVDINGNQMENP
IDIVINVIDMNDNRPEFAHQIWNGTVDEGAKPGTFVMTVTSLDKDDPNTANGMLRYKILS
QTPETPSPNMFTINNKTGKIITVAAGLDREKVSQYTLVIQATDMEGNPTYGLSNTATAII
RLLDVNDNEPEFTRGTWNGGVPENRVNLIVTNLTVTDKDKPGTPAWNAVYRIVSGDPTGR
FSIPTDPTSNEGLVTVVKPIDYEINRSYMLVVVAENEVPLSSGIHRTRLTSATVSIHVID
VNESPNFEPNPKQIKLDEGLPGGSMLTTFIAHDPDKHMQQTIRYSKLFDPANWLEIDPSN
GRISTTALLDRESPYVRNNLYNATFMASDNGIPPATGTGTLQIYLLDINDNAPRVFPQET
EMCERPNPNGINITAVDGDLNPNAGPFAFELASRPSDIRRNWTLTRLNGEYVQLSLKIGY
LQSGIYEVPITITDSGNLPMANTSYLRVKVCQCDHHGDCVDMERIMAAGLGTGAIISILI
CIIILLVLVLMFVMYMKRRDKERQAKQLLIDPEDDVRDNILKYDEEGGGEEDQDYDLSQL
QQPDTLEHDLVKPVGIRRLDERPLHPEPNYPLRSAAPHPGDIGDFIHEGLKAADTDPTAP
PYDSLLVFDYEGSGSTAGSLSSLHSSSSGEEQDYDYLNDWGPRFRKLADMYGGNDD
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atgcactgtacagggggtgcgatgttgaccctcctcgcggctttgcagttggtggtgcat
ggtgaggagacaatgctgtgccagcctggcttcacccagcaagagtacagtgtcatcgtc
agtgatgtcattcccgagggccaggccctgctcaaagtgagcttcacggactgtggcaga
ggttcagggctgcgcttcgaaaccggagacccggacgattttcggataggagaagacggc
acactgtacgccaagcgtaccctccgtgtgtcggagagaaacagccgcggcctcgagatc
cgagcgaagaatttgaattcagaggaagagtggtctacacgagtgaccttcacactacca
gactcgcccaaacaggtcccggagatcgtgtttccatggcgcagcaatgttgtcggcggt
gacggaagcgtgagtcgcgttaagagagactgggtcattcctcccatcaacgtccccgaa
aactcacgaggacagttcccagaggagcttgtcaaaatccgctcagacagggataaaata
aacacactgcgttacagtgtaactggaccgggtgctgatcagagtcctactggtcttttc
attatcgatcccatcacaggacagctgtctgtcaccaagcctctggaccgagaacagatc
tccaactttcatctacgcgctcatgcagtggacatcaacggcaatcagatggaaaatccc
atcgacatcgttatcaacgtcatcgacatgaacgacaacagaccggagttcgcacatcag
atctggaacggcacagtggatgagggcgctaagcctggaacgtttgtgatgacggtgact
tcgctggataaggacgatcccaacacagccaacggcatgctgagatacaagatcctgtct
cagactcctgaaactccctccccaaacatgtttaccatcaataacaagacgggcaagatc
atcaccgtagctgccggtctggaccgagagaaagtgtcccaatacaccttggtcatccag
gccactgatatggagggtaaccccacatacggcttatccaacactgctactgctattatc
cgcctgctggacgtcaacgataatgaaccggagtttaccagaggaacatggaatggagga
gtgcctgagaatcgtgtgaatttgatagtaactaatctgacagtaacagataaagacaag
ccaggcacgccagcatggaacgctgtctatcgcatcgtttcaggagacccgaccggacgc
ttctccatccccaccgatcccaccagtaacgagggtctggtcacagtggttaagccaatc
gactacgagatcaaccgttcttacatgctggtagtggtggccgagaacgaggtgccgctg
tcatccgggatccaccgaacccgcctgacgagcgccaccgtttccatccatgtcatcgat
gtgaacgagagtcccaactttgagcccaaccccaaacagatcaaactggacgaggggctt
ccgggagggtcaatgctcacgacgtttatagcccacgacccggacaaacacatgcagcag
acgatcagatactcaaagctgtttgaccctgctaactggctggagattgaccccagcaac
gggcgcatctccaccactgccctacttgacagagagtctccctatgtcagaaacaacctc
tacaatgccacctttatggcttctgacaatggtattcctccagcaaccgggaccggcaca
ctgcaaatctacctgctggacattaacgataacgcgccacgcgtcttccctcaggagaca
gaaatgtgcgaacgacccaaccccaatggcatcaacatcacagccgtggacggagacctg
aaccccaatgccgggccgttcgcctttgagctcgccagccgaccctctgatatccgccgg
aattggacgcttacacgcctcaatggcgagtacgtccagttgagtctgaagatcggctac
ctgcagagcggaatctacgaagtgcccatcaccatcacggactccggcaaccttcccatg
gccaacacgtcatacctgcgggtaaaggtgtgccagtgtgatcaccacggagactgcgta
gacatggaacgcatcatggctgccgggctgggtaccggagccattatctctatcctgatc
tgcatcatcatcctgctggtcttggtgctgatgttcgtgatgtatatgaagagaagagat
aaggagcgtcaggcaaagcagctgctgatcgacccggaggacgacgtgcgagacaacatc
ttaaaatacgacgaggaggggggcggagaggaggaccaggattatgacctgagtcagctg
cagcagcccgacactctggagcacgacttggtgaagccggtcggcatccggcggctagac
gagcgcccgctgcacccagagcccaactaccctctccgctctgctgcccctcaccctgga
gacatcggagacttcatccatgagggtcttaaagcggccgacaccgaccccacggcacca
ccgtacgactccctgctggtgttcgactacgaaggcagcggctccaccgccggctcgctc
agctcgctgcactcgtccagctctggagaagagcaggactacgactacctcaacgactgg
gggccacggttccgtaaactggccgacatgtacggtggaaacgacgactaa
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