Trichomycterus rosablanca: 134320156
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Entry
134320156 CDS
T09921
Symbol
parp1
Name
(RefSeq) poly [ADP-ribose] polymerase 1
KO
K24070
poly [ADP-ribose] polymerase 1 [EC:
2.4.2.30
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03410
Base excision repair
trn04210
Apoptosis
trn04217
Necroptosis
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
134320156 (parp1)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
134320156 (parp1)
04217 Necroptosis
134320156 (parp1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
trn03032
]
134320156 (parp1)
03036 Chromosome and associated proteins [BR:
trn03036
]
134320156 (parp1)
03400 DNA repair and recombination proteins [BR:
trn03400
]
134320156 (parp1)
Enzymes [BR:
trn01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.30 NAD+ ADP-ribosyltransferase
134320156 (parp1)
DNA replication proteins [BR:
trn03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
134320156 (parp1)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Centrosome formation proteins
Centriole proteins
134320156 (parp1)
DNA repair and recombination proteins [BR:
trn03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
134320156 (parp1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PARP
PARP_reg
zf-PARP
PADR1_N
WGR
Zn_ribbon_PADR1
BRCT
BRCT_2
ECR1_N_2
Motif
Other DBs
NCBI-GeneID:
134320156
NCBI-ProteinID:
XP_062857542
LinkDB
All DBs
Position
9:complement(39128518..39158819)
Genome browser
AA seq
1017 aa
AA seq
DB search
MADSQDDKLYKAEYAKSGRASCKKCKENIAKDSLRMAIMVQSPMFDGKVPHWHHFSCFWL
QAAVQTPSDISGFSDLRWDDQEKVKKAIETGEAVGGKSDKKGAAKGVKTLNDFAVEYAKS
NRSTCKGCEQKIEKDQIRVSKKSVDPEKPQLGLIDRWYHTGCFVSRREELMFKPECSAAQ
LKGFAALKAEDQEELKKRLPAVKTEGKRKADEVDGGVASKKQKKEEEQEKKKLEIKLKEQ
SQLIWGIKDKLKKFCSTNDMKELLIANDQDVPSGESNVLDRLSDCMTFGSLKPCETCFGQ
LVFKSDAYYCTGDISAWTKCVYKTQTPNRKDWVTPQEFHEISFLKKFKFKRQDRMFPKEP
PAAPAAPAVSTATTSTSSSNVHTDLPEEVSADKPLTGLKVLSVGKLSKNKDELKAVVEEL
GGKITSTANKATFCISSTKEVEKMSKKMEEVRDAGVRVVSEDFLTDIKSSGKGPRELIAL
HGISPWGAEVKVEAQSSSAAAKSTGGSSKSASKVKEEDGGSKAKKMKLTVKGGAAVDPDS
GLEDCAHVLDQNGKIYSATLGLVDIVRGTNSYYKLQLLEDDVQKRYWVFRSWGRVGTTIG
GNKLDKFYDKNSAMDNFRTLYEEKTGNSWTSSSFTKYPNKFYPLEIDYGQDEEAVKKLTA
STGSKSHLAKPVQELIRTIFDVESMKKAMVEFEIDLQKMPLGKLSKRQIQSAYSLLTEVQ
QAVSDNAAEALILDLSNRFYTLIPHDFGMKKPPLLSNLDYIQAKVQMLDNLLDIEVAYSL
LRGGAEDNKKDPIDINYEKLKTKIEVVDKASEEAQVILQYVKNTHAATHNNYTLEVEEIF
KIDREGEYQHYRPFKELPNRQLLWHGSRTTNYAGILSQGLRIAPPEAPVTGYMFGKGVYF
ADMVSKSANYCHTSQSDPVGLILLGEVALGHMHELKKASHITKLPKGKHSVKGVGRTAPE
PSATVSLNGVDVPLGKGSNTNIDDTSLLYNEYIVYDVSQVNLKYLLKLRFNYQTSLW
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggcagattcacaagacgacaagctttataaagcagaatatgcaaagagcggccgcgca
tcgtgcaagaaatgtaaagagaacattgctaaagactcgctgaggatggccatcatggtg
cagtcgcccatgtttgatggcaaagtgccgcactggcatcacttttcgtgcttctggctc
caggcggccgtgcagaccccctcagacatctcggggttttctgatctccgctgggacgac
caggagaaggtgaagaaagcaatcgaaacgggtgaggcagtcggaggtaaaagtgataaa
aaaggagcagctaagggggtgaagactctcaacgactttgcagtggagtacgccaaatct
aacaggagcacctgcaagggctgcgagcaaaagatcgaaaaggaccagatccgcgtatcg
aagaagtccgtggaccccgagaagcctcagctgggtctgatcgaccgctggtaccacaca
ggctgcttcgtgagccgtcgtgaggagctgatgtttaaaccggagtgcagcgctgctcag
cttaaaggattcgccgcactgaaggctgaagatcaagaggagctgaagaagagactcccg
gctgtaaagactgaggggaagaggaaagcggacgaagttgatggaggcgtagcgtccaag
aaacagaagaaagaggaggagcaggagaagaaaaaattagaaataaaactaaaggagcag
agccagttgatttggggaattaaagacaagctgaagaaattctgttcgaccaacgacatg
aaagagcttcttatcgctaacgaccaggacgtcccgtctggagaatcgaacgtcttggac
cgtctgtcggactgcatgactttcggatcgttgaagccctgcgagacctgctttggtcag
ctggtgtttaagagcgacgcctactactgcaccggagacatctcggcctggaccaagtgt
gtgtacaagactcagacgcccaaccgtaaggactgggtcactcctcaggagtttcatgag
atttccttcctgaagaagttcaagttcaagcgtcaggatcgcatgttccccaaagagcct
cctgctgcccccgctgcccccgccgtctccaccgctaccaccagtacctccagttccaac
gtccacactgacctccctgaggaagtgtctgcagataagcctctgaccgggctgaaggta
ctgtccgtgggaaagctgagcaagaacaaagacgaactgaaggctgtggtggaggagctg
ggaggaaaaatcaccagcaccgctaacaaagccaccttctgcatcagctccaccaaggaa
gtcgagaagatgagcaagaagatggaggaggttcgagacgccggcgtgcgggtcgtctcc
gaggacttcctcaccgatattaagtcctcgggaaagggccccagggagctcatcgccctg
cacggaatctcaccctggggggcagaggttaaggtcgaggcccagtcctcgtctgctgca
gcgaagtccaccggaggctcgtcaaagagcgccagcaaagtcaaagaggaagatggtggt
agtaaggcgaagaagatgaagctgactgttaaaggtggagcggcggtcgacccagattca
gggttggaggattgtgctcatgtgttggatcagaacggtaagatctacagcgccacgctg
ggcctggtggacatcgttcggggcaccaactcctactacaaactgcagcttctggaggac
gacgtccaaaaacggtactgggtgttcaggtcgtggggcagagtgggcaccactatcgga
ggaaacaaactggataagttttatgacaagaactcggccatggacaacttccgcaccctg
tatgaagagaagacgggaaacagctggacctccagcagctttactaaatatccaaataag
ttttatccgctcgagattgattatggacaggatgaggaggcggtgaagaagcttacagcc
agcaccggctccaagtctcacctcgccaagccagtgcaggagctcatcagaacgatcttc
gatgtggagagcatgaaaaaagccatggtggagtttgagatcgacctacagaagatgcct
ctggggaagctgagtaagaggcagatccagagcgcttattctcttctgactgaagtccag
caggctgtgtctgataacgcagcagaggctctgattctggatctgtccaatcgcttctac
actctcatcccgcacgacttcggcatgaagaaacctccgctgttaagtaatctggactac
attcaggctaaagttcagatgttggacaacttgctggacatcgaggtggcctacagtctg
ctgcgtggtggcgctgaagataacaagaaagatcccatcgacatcaactacgagaaactc
aaaaccaagattgaggtggtggataaagcgtcggaggaagctcaggtgatcctgcagtat
gtgaagaacacacacgctgctactcacaacaattacacactggaggtggaagagatcttt
aaaatcgacagggagggtgagtaccagcactaccgacccttcaaagagttgcccaaccgt
cagctgctgtggcacggctctcgcaccaccaactacgctggtattctgtcccagggtctg
cgtatcgctcctcctgaggctccagtgacaggttatatgttcggcaaaggtgtttacttt
gctgacatggtgtctaagagtgccaactactgccacacgtcccagtctgatcccgtaggc
ctcattctgttaggagaagtcgctctgggacacatgcacgagctgaagaaggcctcgcac
attacaaaactcccgaagggaaaacacagtgtgaaaggtgtgggaaggaccgctcctgag
cccagtgccaccgtctctcttaatggggtggacgttcccttgggcaaaggctccaacacg
aacattgatgatacgagtctgctgtataacgaatatatcgtgtatgatgtttctcaggtg
aatctaaaatacctgctgaaacttcgcttcaattaccaaacgtctctgtggtga
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integrated database retrieval system
