Trichomycterus rosablanca: 134320342
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Entry
134320342 CDS
T09921
Symbol
rbm25b
Name
(RefSeq) RNA-binding protein 25b isoform X1
KO
K12822
RNA-binding protein 25
Organism
trn
Trichomycterus rosablanca
Pathway
trn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
134320342 (rbm25b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
trn03041
]
134320342 (rbm25b)
Spliceosome [BR:
trn03041
]
Complex A
U1 snRNP components
U1 related factors
134320342 (rbm25b)
Complex B
134320342 (rbm25b)
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Gene cluster
GFIT
Motif
Pfam:
PWI
RRM_1
Motif
Other DBs
NCBI-GeneID:
134320342
NCBI-ProteinID:
XP_062857764
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All DBs
Position
9:4320209..4345122
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AA seq
847 aa
AA seq
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MSFPPHLNRPQMAIPTMPPGIPPPQFAGFPPTMPPGTPMIPVHMGIMAPAPAVLVPTTMS
VVSKVAAPRKEAPLPRLKEPDENSGPTTTVFVGNISEKASDMLIRQLLSKCGLVLSWKRV
QGASGKLQAFGFCEYKEPESTLRALRLLHELQVGDKNLLVKVDAKTKAQLDEWKAKKKSS
NGQNSTTEEGAEEEEDALDEETQKRDQMVKGAIDGLIREYSTELSASSQEDEASRRKKKK
EKKEEEDINAIDMEEDKRDLISREINKFRDTHKKLEEEKGKREKERQELERERRDRDKER
ERERERREREREKDRERERERERERERERDRERERERERERERERDWDRSRDHSEARSRS
REQSRERERERDKDKKRDREEDEEEAYERRKLERKLREKEAAYQERLKNWELRERKKARD
YAKESERDEERRRETTKEGKRLKEFLEDYDDDRDDPKYYRGSALQKRLRDREKEIELDER
DRKREKEELEEIRQRLLAEGHPDPDAELRRMEEEAERLRQPPVKPEPEEERESKPSREDR
ERERERERERERGRERDRERERERERERERERERERERHRPNPQPPSDDDVEDGEEVPDE
EDTKPCLKPTMRPITAAPSVSSASGNASPNTPREESPCGIIIPHENSPPEILPQEEHRPK
IGLSLKLGATGSPGQPNMAKRKKLAVESVFNRFDDDEVDEGPRKRKLVPLDYEDEDKGSG
GVEGAGAAGGKGANTEEKRKHIKSLIEKIPTAKPELFNYPLDWSVVDSTLMEKRIRPWIN
KKIVEYIGEEEATLVDFVCSKVMAHSTPQGILDDVAMVLDEEAEVFIVKMWRLLIYETEA
KKIGLGK
NT seq
2544 nt
NT seq
+upstream
nt +downstream
nt
atgtccttccctccacatctcaaccggccgcaaatggccatccctaccatgccccctggt
atcccccctccacagtttgctggatttcctccaacgatgccgccaggaaccccgatgatt
ccagttcacatgggcatcatggccccggcgcccgcggtactcgtacccaccaccatgtcg
gtggtcagtaaagtagccgccccgaggaaagaagctccactcccacgcctcaaggaaccg
gacgagaacagcggtcccacaaccaccgtgttcgtaggaaacatctcggagaaggcttca
gacatgctgatcagacagctgctgtcgaaatgtggcctggtgttaagttggaaacgtgtt
cagggggcttcaggaaaactacaagcgtttggtttctgcgagtacaaggagcccgagtcc
acgctgcgcgctctgcggctgctgcacgaactgcaagtgggagacaagaacctgctggtg
aaggtggacgccaaaaccaaagcgcagctggacgagtggaaggccaagaagaagagctct
aacgggcagaacagcacgactgaggaaggtgccgaggaggaagaggatgctctggacgag
gagacgcaaaaacgagaccagatggtaaagggcgccatcgacggcctgatccgcgagtac
tcgacagagctcagcgcgtcctctcaggaggacgaggccagcaggcgcaagaagaaaaaa
gagaaaaaggaagaggaggacatcaacgccatagacatggaggaggacaagcgcgatttg
atctccagggagatcaacaaattccgcgacacccacaagaaactcgaggaggagaaggga
aagcgagagaaggaacggcaggagctggagcgagagcggcgcgaccgggacaaggagcgt
gaacgcgagcgggagaggagagagcgcgagagggagaaggaccgcgagcgcgagagggaa
cgcgagcgggaaagggaacgcgagagggacagggagcgcgagagagagcgcgaacgggag
cgagagagagaaagagactgggacaggagccgggaccacagcgaggcacgcagcagatcc
agagagcaaagccgcgaacgagagagagaacgagacaaggataagaagcgcgaccgcgag
gaggacgaggaggaggcgtacgagaggcgcaagctggagagaaagctccgggagaaggag
gccgcctatcaggagaggctgaagaactgggagctgagagagaggaagaaggcgagagat
tacgccaaagaatccgagagagacgaggaacgcagacgagagacgactaaagaaggtaag
cgactgaaggagtttttggaggactacgacgacgaccgagacgacccgaaatattacaga
ggcagcgctctgcagaaacgcctgcgcgaccgagagaaggagatcgagctggacgagaga
gacaggaaacgagagaaggaggagctggaggagatcaggcaaagactgctggctgagggg
catcctgatccagatgcagaactacgcaggatggaggaggaggccgagcgtttacggcag
cccccggtgaagcccgaaccggaagaggagcgcgagagcaaaccgtctcgcgaggaccgt
gagagagagagagaacgagagcgagagagagagagggggcgggagcgcgacagagaacgg
gaacgggaacgcgagagggagcgagagagggagagagaacgagagcgagagaggcaccgg
ccgaaccctcagcccccctcggacgacgacgtcgaggacggagaggaggtgccggacgaa
gaggacaccaagccgtgcctcaaacccaccatgagacccatcacggccgccccgtccgtg
tcctcggccagcggtaacgcctcgcccaacacgcccagggaggagtcgccctgcggcatc
atcattcctcacgaaaactcacccccggagatcctcccgcaggaggagcaccggcccaaa
atcggcctcagcctcaaactcggtgccacgggcagtccgggtcagccgaacatggccaag
cgtaaaaagctggcggtggagagcgtcttcaaccgcttcgacgacgacgaggtggacgag
gggccccggaagaggaagctggtgcccttggactacgaggacgaggacaaaggcagcggg
ggagtggagggcgccggtgcagcggggggcaaaggggccaacacggaggagaaacgaaaa
cacatcaagagtctgatcgagaaaatacccaccgccaaacccgagctcttcaactacccg
ctggactggtccgtcgtggactcgacactaatggagaagcgcattcggccgtggattaat
aagaagattgtggagtacatcggcgaggaggaagccaccctggtcgactttgtttgctcg
aaggtgatggcacacagtacgccccagggaattttggatgatgttgctatggtgctggac
gaagaggccgaggtgttcatcgtgaagatgtggaggctcctaatttacgaaaccgaggcc
aagaagatcggactgggcaaatga
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