Trichomycterus rosablanca: 134320513
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Entry
134320513 CDS
T09921
Symbol
stxbp5a
Name
(RefSeq) syntaxin-binding protein 5a isoform X1
KO
K08518
syntaxin-binding protein 5
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134320513 (stxbp5a)
Membrane trafficking [BR:
trn04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
134320513 (stxbp5a)
SNARE
VAMP, Ykt6, Sec22 (R)
Tomosyn
134320513 (stxbp5a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LLGL
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
WD40_WDHD1_1st
ANAPC4_WD40
Beta-prop_RIG_2nd
Beta-prop_HPS5
WD40
WD40_Prp19
Beta-prop_IFT140_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR19_1st
Beta-prop_WDR90_POC16_2nd
Lgl_C
EIF3I
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Synaptobrevin
VPS8_N
WD40_like
CFAP43_N
Reov_VP3_GTase
Motif
Other DBs
NCBI-GeneID:
134320513
NCBI-ProteinID:
XP_062857991
LinkDB
All DBs
Position
9:13677417..13888116
Genome browser
AA seq
1092 aa
AA seq
DB search
MKKFNIRKVLDGLTAVSSPSPSPHAGAKENDFILPDTLQSEHFQLCKTVRHGFPYQPSSM
ALDPVQKILAIGTQCGALRLFGRPGVECYCQHESGAAVIQLQFLINEGALVSALADDSIH
LWNLRQKRPAVLHSLKFNRERITFCHLPFRSKWLYVGTERGNIHIVNVESFTLSGYTIMW
NKAIELSSKSHPGPVVHISDNPMDEGKLIIGFESGIVVLWDLKSKKADYRYTYDEAIHSL
AWHHEGKQFICSHSDGTLTIWNIKSPAKPIQTITPHGKQSKDGKKPDVCKPILKVEYKTT
RAGDPFMILSGGLAYDTVGRRPCLTVMHGKSTAVLEMDYPIVDFLTICETPYPNDFQEPY
AVVVLLEKDLVVIDLAQNGYPIFENPYPLTIHESPVTCCEYVADCPVDLIPALYSVGSRQ
KRQGYSKKEWPISGGNWGQGTQSYPELIITGHADGSVKFWDASAIMLQVLYKLKTAKLFE
KARCKEEKAYTEIVDEDPFAIQLMAWCPDSRMLCVAGVSAHVIIYRFSKLEMITEVIQLL
EVRLQYELNDLDSPEGDHTPAHHTPNTSPSPQNSGPHTHPSTSSHSSNGIRDNVPCLKVR
SSPLRESPGYQVELVVQLVWVSGEPPQQISSLAINSSYGLVVFGNANGLAVVDFLQKTVL
LNLSTVELYGPSDPYQRQPRSPRKNRQPSGGLCDINEGSATSEDRCKSPTSDNRDNSFSR
SRSSSVASIDRESREAITSFYFSQTFTRKMDSTLTPALWVGTSLGTVLAISLSMPPAGEQ
RLLQPVIVSPSGTFFRLKGGIVRMALLDATGSLVPPASEPWYEQNADGEEKERVRKRRPV
SISPSTSQELNECQYMVVCSEKQAKVIALPSQNCIHKHNITETSFVLRADVVYMSSGNCV
ACFCANGHIMTLSLPGLRPLMDVNYLPLTDMRIARTFCFTNLGQAMYLTSPTEIQRITYS
QDVCENLQEMLSELFTPVETPEAPNRGFFKGLFGGGALSLDREDLFGESGAGKASRSLAQ
HIPGPGGIEGMKGAASGIVGDLARARIALDERGQKLSEVEEKTAAMMASADSFSKHAHDM
MLKCKDKKWYQF
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagtttaatattcggaaggtgctggatggtctgacggctgtttcttcaccctca
ccatctccgcacgctggagccaaggaaaacgacttcattctgccggacaccctccagagc
gagcacttccagctctgcaagactgtccgccatggctttccctatcagccgtcctctatg
gccttagacccagtccagaaaatccttgccattgggacccaatgtggagcattgcgatta
ttcggtcgtccaggagtggaatgctactgtcagcacgagagcggagcggccgtcatccag
ctacagttcctcatcaacgagggggcattagtgagcgctctagccgatgacagcattcac
ttgtggaacctgcgtcagaagagaccagccgtactgcactcgctcaagttcaacagggag
aggataacgttctgtcacctgcctttccgaagtaagtggctgtatgtgggcacagagcga
ggaaacatccacattgtaaacgtggagtccttcaccctctcaggatacaccatcatgtgg
aacaaagccattgaactgtcctccaagtctcaccctggccctgtcgtccacataagtgat
aacccgatggatgaaggaaaactgataataggatttgagtctggtatcgtggtgctgtgg
gacttgaaatcaaagaaggcagactaccgttacacttacgacgaggcgatccactctctg
gcgtggcaccacgaggggaaacagtttatctgcagtcactcagatggcacactgaccata
tggaatattaagtcgccagccaagcctatacagacaatcaccccacacggaaagcagtcc
aaggatggaaagaagccagatgtatgtaaaccaattcttaaagtagagtacaagaccact
agagcaggggacccttttatgatcctgtctggtggtttagcctacgacacagtaggtcgg
cgaccatgtctgactgtaatgcacggcaagagtactgcagtgctggagatggactatcct
atcgtagactttctcacgatctgtgaaaccccataccctaatgattttcaggaaccttat
gctgtagtcgtccttctagaaaaggatttagttgttattgaccttgcgcaaaatggttac
cccatctttgagaacccctaccccttgactatacacgagtctccagtgacgtgttgtgaa
tatgttgctgactgtcctgtggacctcatacctgcactttactcagtcggctcccgccaa
aaacgacagggctacagcaaaaaggaatggcctataagtggtggaaactggggccagggc
acccaaagctaccctgaattaataataactggccacgctgatggttcggtgaagttttgg
gacgcctctgcaataatgcttcaggtgttgtacaagctgaagacagccaagctgtttgaa
aaggcacgctgcaaggaagagaaggcgtatacagagatcgtggacgaagatccattcgct
attcagctcatggcctggtgccctgacagccgtatgctatgtgtagcaggagtgtctgcc
cacgtcatcatctacagattcagcaagctggagatgatcactgaggtcatacagctgctg
gaggtccgattgcagtatgagctaaacgacctagactcaccagaaggcgaccatacacca
gcacatcacactcctaacacctcccccagtccacagaactctggtccacatacacaccca
tctacaagcagccactcgtccaacggcatcagagataacgtgccctgtctcaaggttagg
agtagtcctctgagggagtcaccgggatatcaggtggagttggtggtgcagttggtatgg
gtaagcggagagccaccacagcagataagcagcttggcaatcaactcttcatatggcctt
gtggtttttggcaatgctaatggcttggcggtggtggatttcctccagaagactgttttg
ttaaacttgagcactgttgagctgtatggacccagtgacccctatcagaggcaaccacga
tcacctcgcaagaacaggcaaccctccggagggctatgtgacatcaacgaaggttcagcc
acgtcagaggaccgctgcaaatcccccacctcagacaacagggacaactccttcagccgc
tcccgcagctccagtgttgccagcatcgacagagaatcacgggaggccatcacgtcgttt
tatttttcccagacattcacgcgcaagatggacagcactctgactcctgcactgtgggtg
ggaacctctctgggaacagtgcttgctatctcactgagtatgccccctgcgggagagcag
cggttactgcagccagttattgtttcgcccagcggtacttttttcagactgaaaggtggc
atcgtccggatggcattgctggatgcgacgggttcgttagtgccgcccgcctcggagccg
tggtatgaacaaaatgctgacggtgaggagaaggagagagtgaggaagaggaggcctgtg
tctatctccccctccacctcgcaggagctgaacgagtgccagtacatggtggtgtgctcg
gagaagcaggccaaagtaattgcgctaccctctcagaactgcattcacaagcacaacatc
acagagacgtcgttcgtgctgcgggcagacgtggtctacatgagctcaggcaactgcgtg
gcgtgcttctgcgccaatggacacatcatgaccctcagtttgcctggacttagaccatta
atggatgtcaactacctgccactaacagatatgaggatagccagaacattctgcttcacc
aacctgggccaggcaatgtatctgacctcccccactgagatccagaggataacttacagt
caggacgtctgcgagaacctgcaggagatgctcagtgagttgttcacgccagtggagaca
ccagaggctccaaaccgaggattctttaagggtctttttggaggaggagcactgtcactg
gatagagaagatctctttggggagtcaggggcaggcaaagcttccaggagccttgcccaa
cacatccctggtcctgggggaatcgagggcatgaagggtgcggcatcaggcattgtgggt
gacctagcacgagcaaggatagcgctggacgagagggggcagaaactgagtgaggtggag
gaaaagacggcggccatgatggctagcgcagactcattttccaaacacgcccatgatatg
atgctgaagtgtaaggataagaaatggtaccagttctga
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