Trichomycterus rosablanca: 134320572
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Entry
134320572 CDS
T09921
Symbol
rxrgb
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
trn
Trichomycterus rosablanca
Pathway
trn03320
PPAR signaling pathway
trn04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
134320572 (rxrgb)
03320 PPAR signaling pathway
134320572 (rxrgb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134320572 (rxrgb)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
trn03310
]
134320572 (rxrgb)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
134320572 (rxrgb)
Nuclear receptors [BR:
trn03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
134320572 (rxrgb)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
134320572
NCBI-ProteinID:
XP_062858098
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Position
9:18869081..18946412
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AA seq
442 aa
AA seq
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MDNNDAYLHLNSPGALNSPLSQPPPMSSMMGHSSVISSSRPIPSAMGYSVITSSMNSPSM
SLPSTPVMGYSTLNSPQMNSLSSVSSSEDVKPPPGLPPLANMNSYQCTSPGSMSKHICAI
CGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKECLIDKRQRNRCQYCRYQKCLA
MGMKREAVQEERQRGKEKSDNEVESTSSFNEDMPVEKILDAELAVEPKTEAHSEGSPGNS
TNDPVTNICQAADKQLFTLVEWAKRIPHFSDLPLDDQVILLRAGWNELLIASFSHRSVTV
KDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMQMDKTELGCLRAIVLFNPDA
KGLSNPAEVEVLREKVYASLESYTKQKYPDQPGRFAKLLLRLPALRSIGLKCLEHLFFFK
LIGDTPIDTFLMEMLEAPHQIT
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atggacaacaatgacgcatatttacatctcaactcacctggggccctgaactctcctctc
tcacagcctccaccaatgagctccatgatgggtcactcaagtgttattagctcttcacgg
cccatcccttcagccatgggctactcagtcatcacttcctctatgaactcgccctccatg
tcattgccttccacaccagtaatgggttacagcaccctcaacagcccacagatgaactct
ctgagcagtgtgagcagctcagaggacgtgaagcctcctcccggcctgccgcctttagcc
aacatgaacagctaccagtgcaccagtcccggctccatgtccaaacacatctgcgccatc
tgcggggatcgctcctcaggaaaacactacggtgtgtacagctgtgaagggtgtaagggg
ttcttcaagaggaccatccggaaagatctgacctacacgtgtcgagacaacaaggagtgc
ctgatcgataaacggcagcgcaaccgctgccagtactgtcgctaccaaaagtgcctggcc
atgggcatgaagagagaagcagttcaggaggagaggcagcgtgggaaggagaaaagtgat
aatgaggtagagtcaaccagtagttttaatgaagacatgcctgtggagaaaatcctggac
gcagagcttgcagtggaacccaaaactgaagcacactcagaaggcagccccggaaattct
accaatgacccggtcactaatatctgccaggcagcagacaaacagctcttcacactggtt
gaatgggctaaaaggataccgcacttctctgacctacccttggatgatcaggtcatttta
ctccgggcaggttggaatgagctgcttattgcctccttttcacaccgctctgtcacagta
aaagatggcattttgctggccactggccttcacgtgcacagaagcagcgcccacagtgct
ggagtaggctctatttttgacagggtgctgactgagctggtgtcaaagatgaaagacatg
cagatggataagacggagttgggctgcctcagagccattgtacttttcaaccctgatgct
aaaggcctgtctaacccagctgaggttgaggttctcagagaaaaggtctatgcttcgctg
gagtcctacaccaagcagaaatacccagaccagcctggcaggtttgctaagctcttactt
cgtcttcccgctctgcgctcaatcggactcaagtgtctagagcatctcttcttcttcaag
ctgattggagacacacccatagacaccttcctaatggagatgctggaagcacctcaccag
atcacatga
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