Trichomycterus rosablanca: 134320573
Help
Entry
134320573 CDS
T09921
Symbol
tprb
Name
(RefSeq) translocated promoter region b, nuclear basket protein isoform X1
KO
K09291
nucleoprotein TPR
Organism
trn
Trichomycterus rosablanca
Pathway
trn03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
134320573 (tprb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134320573 (tprb)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
134320573 (tprb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
Motif
Other DBs
NCBI-GeneID:
134320573
NCBI-ProteinID:
XP_062858101
LinkDB
All DBs
Position
9:complement(19131193..19172428)
Genome browser
AA seq
2330 aa
AA seq
DB search
MAAVLEQVLETTELAKLSRATQGKLEKYVSDQKSEIDDLKVQYKQLQVDSEQQYFDLDKQ
FVEKQEQFVALTQEHEKLTEEFTKRDEELKCLSEKTREQESSYVQLQSQQNQLSKAKDEL
EAEKRELVRTLQRRSEEVESQNEDLRTVNDKLVEVSAAKMQLQLKLDELEASEVAIKYKE
KRMNQEKELLQGQVAWLNEELKSKSETLLSLSRQKGSEILELKCSLNNKEDEITRLQDQV
ASLKATNENKQKQTEELINKLREAKEQQANCEEKFQNELNANIRLSNLYKGAAADAEAKS
VELSQAVDELHKLLKEAGEAHKALEEKMASMESCKQREVAEMKERIGSLEKEVDHANDLL
SGNKHRVGSTSDLVFPAEQLSTMSPTASVITKIKPGMKLTEIYAAYVESQEQLHLEKLES
KRVNKYLDDIVQEVEAKAPILKRQREELERTQKSVASLSGKLEQAMQEVQRLQREADEAK
KRSSMLERDNQRFEMQISDMAHQVRVLLVELEEARGNHVLHDDDEISFADVSSSSAVISQ
HLVTFRSVEELQQQNQRLLVAIRELGDAQEKGEMEDESTKIGQLQVSLKKAMSELEQLRE
QRAQHMQVTESIARQRDMYRGLLAQATGVSFPQQGAIPEEFSLTSTPRRSPAVTPTTATP
TGLVATVVESTETVEAKAALKQLQEVFVDFKKEKTENEKALTDQCTKMQEQLSEVRTQNS
KTSSQLEFTSKRYEMLQDNVEVYRKDIASLREQTQKQAAAAQKNEQTIHTLTEDLRAAND
KLAQTEARAENLRKERDMLKMVESRLIQEKESILAQQRSQNILLTNLESIQATLQRSDTE
TRQRLLLQVEKQEREILQLQKRLEHEIEQKHVLGRNQDMQLLDAKKQLEVQCALHQKTKE
QLNAAQQELSTVRQQLSSLEGRVYSFSSNTGLAGPHSGGGDAEELLKRLNQAEGKAEVLA
ERMQSTTASLEQYRAMCLSLEEALEKEQQVTEQVKASVESQVLEAQEQLRQLEKKLLEAE
KEKQGLQEEKHQAVAAVEQQVGELRRSLSSLQAEYQEALQKVAMVTTQEQQAVLDSQEQA
RLVAEAQDKYEREMLLHAGDVEALQAAKTQALHVSQLRQQLEEKLQTVSAQLLEARVSWE
EQERILKDEQTKMESCCQDLQKQNELLHEQIQSMSGKMATQLQQAANESSLNISLTEEGK
SQEQLLEILKFVRREKEIAESRFEVALSESLRHRLRVEHLERELKDVQDSLSAERERMQV
TAKTLAQHDELMKKTETMNVLMETNKMLREEKERLEQELQQSQAKVRKLELDILPMQESN
AELSEKSGMLQAEKKLLEEDINRWKTRTQYLVSQQKDADPEEFKRLHSENEDHLKRIQHL
TEENSRLKAEASRSSLSVMALQSQVPNLRENLNKVTMERDSLRKELESKTLEIQEKVRTI
VQVKKLGRRYKIQYEELKNEQSQKETAASSAPVQDQEARQASAQEHQSLRDSLSQSEARI
KELENQLDTLNKTLGEREAEARTVQDQASRMQGELIRLRQELVDKSAHVEQLRQQLAEKE
ERTRKAFLGAKQKINQLVKDNGELKQQRDELKHQHDELKQQREEQEVRINALRSQYEGRL
GRMERELRDLREQQERHVEQRDEPVEQGPSRTQEQQRTTEQRQISLKSTPVAERGSASTS
EPPTANIKPTPLVATPSKPPVIPGNKPTPRASIKPMITPAPVPTPTPTATVMPTTQQESQ
EALQSSEAPLEHVSVYGSASGTVRSTSPNIQTTLAQPILSVQQNQATAFVQPTQQQSLPP
VEQASQEPASATMMMEATPSTSQMERSSTSTAVFGTVSATPGSALSKRPREEELAGSPVD
IELQDEPNEPPISKKLRIQRVELEAEMLAEDSAEAESVVPGFMQEVPDVSQDLESYQSLE
EGVDETGASQSVPVELLLSETAGTPHSQSQDEPKENVIVICSDSESGDEEPEEEAYEEEQ
DYEDEEDDEDEDDDGGIGEEGEESNEGSGSGDPNEAYEGDNTDGPDATDPGTETEESLGA
AESTQYVADSQTASFETNTLVLFSADPPISSSASRPPQSPRRPQQSLPSRLNVHAPPIQE
LASTSHVQCIPTRRQPAGRGLQLTSGVTGSAQPQQHFYEEDDRIVPSTPTLGHRSDSFAE
VIQSSQVAGVPRFGFGSGSTDDVPQTSSSHSDLDQLSSQGETLSSEMTEQASQSVPTVST
STPGVCVVTGPSASEERDVILLESEEDGSAEAVLESVAQTEAEEPAQPSDEASLPSTSQE
PSSSCADTSSTSSTRTRAGSSRQWTRGRGTRGFVKRDGPGVMGVRGRFAR
NT seq
6993 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagtgctggagcaggttttggagacgaccgagttagctaaactttctcgggcg
actcaaggcaaactagagaaatatgtttcagatcagaagagtgagattgatgatctgaag
gttcagtataagcagttgcaagtggacagtgaacaacaatactttgacctggacaagcaa
tttgttgagaagcaggaacagtttgtggcattaacacaagaacatgaaaaactcacggag
gagtttacaaagcgtgatgaagaacttaaatgtctcagtgaaaagaccagggaacaagaa
tcttcatatgtgcagctgcagtcccagcagaatcaactttccaaagcaaaggatgagctg
gaggcagagaaacgagagctggtgcgcacgctacagaggaggtctgaggaggtagagagc
cagaatgaggatttaagaactgtcaatgataagctggtggaggttagtgctgcaaaaatg
cagttgcagttgaagctggatgagctggaggcctctgaagttgcaatcaagtacaaagag
aagcgcatgaatcaggagaaagagctgctccagggccaagtggcctggctaaatgaagaa
ctgaagtctaaaagcgagaccctgctttctctctcacggcagaaagggagtgaaatcctg
gagcttaagtgcagtttaaacaacaaagaggatgagattaccagactccaagaccaagtg
gccagtttaaaggccactaatgaaaacaagcaaaagcaaaccgaggagctgatcaacaag
ctaagagaggcaaaggaacaacaagccaattgtgaagagaagtttcagaacgagctcaat
gcaaacatcaggctgtcaaacctgtacaagggagcagcagcagatgcagaggctaagagt
gtagagctgagccaggctgtggatgagttgcataagctgctgaaggaggcaggagaggcc
cacaaagctctggaggaaaaaatggcgtcaatggaaagttgcaagcagagggaagttgct
gaaatgaaggaacgcatcggcagcctggagaaagaggtagaccacgccaatgaccttttg
tcaggcaacaagcacagagttggctccacatctgatctagttttccctgctgagcagtta
agcaccatgtctcccactgcatccgtcatcaccaagatcaagccgggaatgaagctcact
gagatttatgcagcatatgttgagtcccaagagcagctgcacctggagaagttggagagc
aaacgtgtgaacaagtatctggacgacattgtgcaggaggtggaagccaaagcacccatt
ctgaaaaggcagagggaggagctggaacgcacacagaagtctgtagccagtctgtccggc
aaactagaacaagccatgcaggaggtgcagcgcttgcagagggaagccgacgaggccaaa
aagcgctcgtcgatgctggagcgagacaatcagaggtttgagatgcagataagcgacatg
gctcatcaggtgcgtgttctgctggttgagctggaggaagctcgtggaaaccacgtgctc
catgacgatgacgaaatatcttttgcagatgttagcagttcatctgcagtgatctcgcag
cacctggtaacattccgaagtgttgaggaactgcagcagcagaaccagcggctcctggtg
gccatacgcgagcttggagacgctcaggagaaaggagagatggaagatgaaagtaccaaa
atcggccaacttcaagtgagtctgaagaaggccatgagcgaattggaacagttgcgagag
cagcgtgctcaacatatgcaggttactgagtccattgcacgccagcgagacatgtaccgt
ggcctgctagcccaggctacaggagtcagctttccgcagcaaggtgccatcccagaggag
ttctctctcacctcaacacctcgtcgctcccctgcagttacccccactacagcaacacca
actggcctagttgctactgtagtcgagtccacagagacagtggaggccaaggctgcactg
aagcagctgcaggaggtgtttgtggattttaagaaagagaagactgaaaatgagaaagct
ctgactgatcagtgtacgaaaatgcaggagcaattatctgaagtgcgaacccaaaactct
aagacctccagtcagctggagtttacttcgaagcgctatgaaatgttacaggataatgta
gaagtttatcggaaggatattgcctctctgagggagcagacccagaagcaagctgctgca
gcccagaagaacgagcagaccattcacacactcactgaagacttgcgtgctgcaaatgat
aagcttgcacaaactgaagcacgtgcggaaaacctgcgcaaggagagagacatgctgaaa
atggtggagtctaggctgatccaggaaaaagagtccatcctggctcagcaacgaagccag
aatatcctactcaccaaccttgaatctatccaggccacgttacagcgttcagataccgaa
accaggcaaaggctgctgttgcaggtggagaagcaggagcgagagatcttacagctacag
aagagactagagcacgagattgaacagaagcatgtgctgggacgcaatcaggatatgcag
ctgttggatgctaaaaagcagctggaggtgcaatgtgcattgcaccagaagaccaaggaa
cagctgaatgctgctcagcaagagctcagtactgttcgccagcagctgagcagcctagaa
ggtcgtgtttactcatttagcagcaacacaggactagcagggccacatagtggtggagga
gacgcagaggaactgcttaaacgtctgaatcaagctgagggtaaagccgaggttctggcc
gaaagaatgcaaagcaccaccgcctctcttgagcaatacagagccatgtgccttagtctg
gaggaagccctggagaaagaacaacaggtgactgaacaggtgaaggcttcggttgagagc
caagttttggaggctcaagaacagcttcggcagctggaaaagaagcttctagaggctgaa
aaggagaaacaaggacttcaggaagagaaacaccaagctgtggcagctgttgagcagcag
gtgggcgagctgcgccgaagcctaagcagcctgcaggctgaatatcaggaggctttgcag
aaggtggcaatggtgaccacccaggaacagcaggctgtgctagacagccaggagcaggca
cggcttgttgcagaagcccaggacaagtacgagcgtgagatgctgttgcatgctggcgat
gtggaggccctgcaggcagccaaaacccaggcgctgcatgtgtcacagctccgccagcag
cttgaggagaaactccagacggtcagcgcacaactgctagaggctcgtgtatcttgggaa
gaacaggagcggatccttaaagacgaacaaactaagatggagtcatgctgtcaagacttg
caaaagcagaatgagctccttcatgaacagattcagagcatgagtggaaagatggccact
cagctacagcaggcggccaacgagagctcactcaacatttctctaactgaagaggggaag
tctcaggagcagctcctcgagatccttaagtttgttcgccgagaaaaggaaattgcagag
tcccgttttgaagtggcgctgagtgaaagtctgagacacagactacgtgtggagcacctg
gagcgggagctgaaggatgtgcaggactccctcagtgctgagagggagaggatgcaggtc
actgccaagaccctcgcccagcatgacgagctgatgaagaagactgagactatgaacgtg
ctgatggagactaacaaaatgctgcgggaggagaaggaaagactggagcaggagctccag
cagagtcaagccaaggtacgcaaattggagttggacatcttgcccatgcaggagtccaat
gcagaactgagtgagaaaagcggtatgctgcaggcagagaagaaacttctggaggaggat
atcaaccgctggaaaacccgaactcagtacctggtgagccagcagaaggatgcagaccca
gaagagtttaagcgtcttcactcggagaacgaagatcatcttaaacgcatccagcatctc
accgaggaaaacagccggctcaaagcagaggcttccaggagcagcttatcagtcatggct
cttcagtctcaggtaccgaacctgcgggaaaatcttaataaggtaacaatggaaagggat
agcctgaggaaagagcttgaatccaagactctggagatccaggagaaggtcagaaccatc
gtgcaagtgaagaagcttggccggcgttataaaatccaatatgaggagctcaaaaatgag
caaagccagaaggaaactgctgcatcctcagctccagttcaagaccaggaggctcggcag
gcctctgcccaggaacaccagagtctcagagattcacttagtcagtcagaggccaggatt
aaggagctggagaaccaactagataccttaaacaaaacgttgggggagcgtgaggcggag
gcacggacagtgcaggatcaggcttcccgtatgcaaggtgagctaattcgtctgcgccag
gagctggtggacaagtcagcccatgtggaacagctccgtcagcagctggctgagaaggag
gagagaaccagaaaggcgtttttgggtgccaaacaaaaaatcaaccagctagtaaaagac
aatggagagctgaagcaacagcgtgacgagctgaagcatcagcatgacgagctgaagcag
cagcgcgaggagcaagaggtgcgcataaatgcgctgcgctcacagtacgagggccgcctt
ggccgaatggagagggaactacgtgaccttcgcgagcagcaggagagacatgtggagcag
agggatgagcctgtggagcagggcccaagcaggacccaggagcagcagaggactacagaa
caaagacaaatttctctgaagtctactccagtggctgaaaggggcagtgctagtacctca
gagccccccacggctaacataaaacctactccattggtggcgacacccagcaagccccct
gttatcccaggcaacaagcccactccgagggcaagtatcaaaccaatgattacacctgcc
ccagtgcctacgcccactcctactgccacagtgatgcccaccacccaacaggaaagccag
gaagctctgcaatcatcagaagctcctttggaacacgtgtctgtttacggcagtgccagt
ggtacggtgcgctccaccagccccaacattcagaccacactagctcagcccatcctgagc
gtccagcagaaccaggccactgcctttgtccagcccacacagcaacagagtctgccccct
gttgagcaagccagtcaggagcccgcctcggctacaatgatgatggaggccacacccagc
acatcacagatggaaagatcctccacatccacagctgtatttggaacagtttcagctact
cctggaagcgccttaagtaagcggcctcgtgaggaggagttggcgggcagtccagtggac
attgaacttcaagacgagcccaacgagcctcccatctctaagaagctgcgaatacagaga
gtggaacttgaggcagagatgcttgcagaggacagtgctgaagcagagagcgttgtgcct
gggtttatgcaggaagtacctgatgttagtcaagatctggagagttaccaatccttggag
gaaggagttgatgagactggagcatctcagtctgtccctgtggagctacttctatctgaa
acagcaggcaccccacactcacagagccaggatgaaccaaaggagaatgtcattgtcatc
tgcagtgactcagagagtggtgatgaagagccagaggaagaggcatatgaggaagagcag
gattacgaggacgaggaggatgatgaggacgaggatgatgatggtggaattggagaggaa
ggagaggaaagcaacgaggggagcggcagtggagatcccaatgaggcctatgaaggagac
aatacagatggtcctgatgccacagacccaggcactgaaacagaagaaagtcttggtgca
gcagagtccacccaatatgtggctgactcacagacagcaagctttgaaaccaacactttg
gtgctgttctctgctgatccacccatttccagctctgcatctcgtcctccacagtctcca
agaagaccgcaacagtcactgccttctcgactcaacgttcacgcaccacctatacaggag
ctggcttcaacctctcatgtccaatgtatccctacacggaggcaaccagctggcagaggc
cttcagttgacatctggagttaccggtagtgcacagccacagcaacacttctatgaggaa
gacgatcgtattgtccccagcacccccactctgggtcatagatcagacagctttgctgag
gtcatccagtcttctcaggtagcaggtgtgccacgttttggttttggttctggttccaca
gatgatgttccacagactagctcgtcacactctgatctggaccagctgtcatcacaagga
gagacgctctcctctgagatgactgaacaagcctcccagtctgttcccactgtgagcaca
tccacgcctggtgtatgtgtggtaactgggcctagtgcatctgaggagagagatgttatc
ctcctcgagtcagaagaagatggcagtgcagaggcagtgctggagtctgtggctcaaaca
gaagctgaagaaccagctcagccttcagatgaggccagtcttccatctaccagccaggaa
ccctcatccagctgtgcagacacaagcagcacttcatcaaccagaactagagcaggatca
agcagacagtggactcgaggacgtggcaccagaggctttgttaaaagagatggaccggga
gttatgggagtgcgagggcgctttgccagatga
DBGET
integrated database retrieval system
