Trichomycterus rosablanca: 134320685
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Entry
134320685 CDS
T09921
Symbol
brf1b
Name
(RefSeq) BRF1 RNA polymerase III transcription initiation factor subunit b
KO
K15196
transcription factor IIIB 90 kDa subunit
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134320685 (brf1b)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase III system
Basal transcription factors
TFIIIB
134320685 (brf1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
BRF1
Zn_Ribbon_TF
Cyclin_N
Zn_ribbon_tTFIIB
RB_B
BRF2-like_C_cyclin_rpt
GGACT
Motif
Other DBs
NCBI-GeneID:
134320685
NCBI-ProteinID:
XP_062858284
LinkDB
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Position
9:30232616..30366033
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AA seq
697 aa
AA seq
DB search
MSSRQCKNCGGADIDIDQARGSAVCTACGSVLEDNIIVSEVQFVENSGGGASAIGQFVSA
DGLAKAPVLGSGFHTGLGKESRAQTLQNGKRQIHSLGSQLQLNQHCLDTAFNFFKMVVSK
HLTRGRKMAHVIAACLYLVCRTEGTPHMLLDLSDLLQVNVYILGKTFLLLARELCINAPA
VDPCLYIPRFAHMLEFGEKTHEVSMTALRLLQRMKRDWMHTGRRPSGLCGAALLVAARMH
DFRRTVKEVIRVVKVCEATLRKRLTEFEDTPTSQLTIDEFMRVDLEKECDPPSFIAGQKK
LKIQRLEQELVKKLDKYEGEISSYRDEIETELENSRPKLRGVYFMYAKEDAQDGRLSLMS
ELSSNEELEDEEMEVAAQHLSQDFINEVLPEVELGPQGGTEAQECGKEAAELPRVSTRVP
LSTLLGPMPSAASLGITDSINHCMTEEKEDEEASDNGELDLEGIDEDEIEKYILNEKEVE
VKTELWMKQNEEYLREQKEKEERIAKEKEEGTYKEKPKKSSKRREPIQANSAGEAIEKML
EQKKISSKINYDVLRDLKSKDASSSCSSPAHPTEEVSGVGPGRKKLTRRKKQPNQSNLGL
AKPAKLMGKRLRPLISSGPKKKRTAVQVIPSPVMPPPVIPVIPPPPTPPPVVESGPVAYE
EPAEEEEEEEVEEPCVSAMKLMGENEYGCEAEEEEVF
NT seq
2094 nt
NT seq
+upstream
nt +downstream
nt
atgagttctcggcagtgtaagaactgtggaggggcggatatagacattgaccaggcgcgt
ggcagtgctgtctgcacggcctgcggctctgtgcttgaggacaacatcatcgtgtctgag
gtgcaatttgtggagaacagtggaggaggagcgtccgctattggccagtttgtttctgca
gatggtctcgcaaaagcccctgttctgggaagtggatttcacacaggccttggaaaggag
tcccgggctcaaacgctgcagaatgggaaacgacaaatacacagcctgggtagccagctg
cagctgaaccagcactgcctcgacacggccttcaatttctttaagatggtggtgagcaag
catctgaccagaggccgcaagatggctcacgtgatagcagcctgcctctacttggtgtgt
cggacagaaggcacgcctcacatgcttctggacctgagtgatctcttacaggtgaacgtg
tatatcttgggaaagacgttcctgctgttggcccgagagctctgcatcaacgctcctgct
gttgacccatgtctgtatattccacgctttgctcacatgttggagtttggagaaaagacc
catgaagtgtccatgaccgcactgaggctactgcagaggatgaaacgagactggatgcac
acaggacggagaccatctggactctgtggtgcagctttgttggtggcggcccgcatgcac
gactttcggcgcacggtgaaggaagtcattcgtgtggtgaaggtgtgtgaggccactctc
aggaaaagactgacagaattcgaggacacacccaccagtcagttgacaatcgacgagttc
atgcgagtggatctggaaaaggaatgtgatcccccttcattcatcgccggccagaagaag
ttaaagatccagcggctggaacaagagctggtcaaaaagctggataaatatgaaggtgag
atcagctcatatcgggatgagattgagacagagctggagaacagcaggcctaaactgaga
ggagtttacttcatgtatgccaaagaagatgcacaggatggccgtctgtctttgatgtca
gagctcagtagtaatgaggaactggaggatgaggagatggaggttgcagctcagcatctt
agtcaagacttcatcaacgaggtccttcctgaagtggagctgggcccacaggggggcaca
gaggcacaggagtgcggtaaagaagcagctgagctgccaagggtttccacccgtgtgccc
ttgagtactcttcttggtccaatgcctagcgctgccagcctcggcatcacagattctatt
aaccactgcatgacagaggaaaaggaggatgaggaagcctcagacaatggtgagcttgat
ctggaaggcatagatgaggatgagattgaaaagtacatcctgaatgagaaggaggtggag
gtgaagacagaactgtggatgaagcagaatgaggagtatctgagggaacaaaaagagaaa
gaggagaggatagctaaagagaaggaagagggcacctataaagaaaagcctaaaaagtcg
tccaaaagacgtgagccgatccaagccaacagtgcaggagaagccatcgagaaaatgctg
gaacagaaaaagatttccagcaaaatcaattatgacgtgctgcgtgacctcaaaagtaaa
gacgccagcagcagctgtagcagcccggctcatccgactgaggaagtgtcaggtgtcggc
ccaggacgtaaaaagctcacccgccgcaagaagcagcccaaccagagcaatctcggctta
gccaagcctgccaaactcatgggaaaaaggctccgccctcttatatcatcaggtcctaag
aagaagaggacagctgtacaggttatacccagtccagtgatgccacctccagtgatcccg
gtgatccctcctccccctacaccgcctcctgttgtagagagcggtcctgtggcgtatgag
gagccagctgaggaagaggaggaggaggaggtggaggagccttgtgtcagtgccatgaag
cttatgggagagaacgaatatgggtgtgaagcagaagaggaagaggttttttag
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