Trichomycterus rosablanca: 134321108
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Entry
134321108 CDS
T09921
Symbol
rfwd3
Name
(RefSeq) E3 ubiquitin-protein ligase RFWD3
KO
K15691
E3 ubiquitin-protein ligase RFWD3 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134321108 (rfwd3)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134321108 (rfwd3)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134321108 (rfwd3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_RFWD3
zf-RING_2
WD40_CDC20-Fz
Beta-prop_WDR5
Beta-prop_THOC3
zf-C3HC4
zf-RING_UBOX
Beta-prop_EML_2
Beta-prop_WDR3_1st
zf-rbx1
zf-C3HC4_2
zf-RING_5
zf-C3HC4_3
EIF3I
WD40
WDR55
zf-RING_Vps41
Beta-prop_RIG_2nd
Beta-prop_EML
WD40_WDHD1_1st
zf-RING_11
CFAP43_N
zf-C3HC4_4
Beta-prop_SPT8
Beta-prop_WDR75_1st
WD40_Prp19
Beta-prop_WDR36-Utp21_1st
Rtf2
zf-ANAPC11
NBCH_WD40
Beta-prop_WDR36-Utp21_2nd
WD40_2
zf-UDP
Myo5a
Beta-prop_ACSF4
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
134321108
NCBI-ProteinID:
XP_062858710
LinkDB
All DBs
Position
1:38930650..38945862
Genome browser
AA seq
699 aa
AA seq
DB search
MEDMEVDVQVGAAEIAGSVGLEVPIIIPDSGSSTEVEEDEYGDGRPVEAVLVPANRPRLA
TTQVVRRRRVRSGLRFHYSTQSAVNRGPLDFLLRVSAASDTEPLSGSTEEVSDSEEEGEN
GGSRGPSPSVEANPVLNTSQPTAAVAPSSQQPNALDPSVPAEAGRAQPVPVQSEAKAESV
PEKTSADPATTAAVTENDEGEGETCSICFEPWTTSGEHRLATLRCGHLFGFTCIDRWLKG
QGAKCPQCNKKAKRADIVLLYARKLRAVDNTEQESLKKSLEQEQSLRRKAELESAQCRLQ
LQVVTDECGKLKREVQELRRLMAQTASSSIRSQASTLSLSQRQESSNGGHYVFSKAVLVS
QAGGCRVISYCEPLSCLLASQPSAHSTLVPGFGVKKISTVNLKASHYIPIHIKQIRGLAF
SRHQDSLLLSAAFDNTIKLTSLMTNTVVQAYNTGKPVWSCCWSHDNNNYIYAGLSNGSVL
VYDVRDTSTHVQELAPLRSSCPVVSLSYLPRAASSLFPSGGLIAGTLEGGCFWEHVDGTT
YRQHVLPLESGGCTNIQVEPESRHCLVTYRPGRANPSVRCVLMELNRSPQQDAAQPPVCS
CAPVQTFTAGSSCKLLTKNAVFKSPASEGSTLVCAGDEGSNSTMVWDAGSGTLLQKLPAD
LPVLDICPFQINQEHYLASLTEKMIKIYKWEQNADRGFV
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
atggaagatatggaggtggatgtgcaggtgggagctgcagagatagctggttctgtaggg
ctggaggtgcccatcataatccctgactctgggagcagcacagaagtagaggaggatgaa
tatggtgatgggaggcctgtagaagcagtcttggtccctgctaacaggccacggcttgca
acgactcaagttgtacggagaaggagggttagatcaggtctgcgattccattattctacc
cagtctgcggtgaacagaggtccattagacttcttactcagggtgtcggcagccagtgac
acagaacctctgtcaggcagcactgaggaagtgagtgactctgaggaggaaggagagaat
ggaggaagcagggggccaagtccttctgtagaagccaaccctgtactgaacaccagccag
cctactgcagcagtagccccttcatctcagcagcctaatgccttagatccttctgttcct
gctgaagctgggagagctcaaccagttccagttcagtcagaagccaaagctgaatcggtg
ccagaaaagacatctgcagatcctgccacaacagctgctgtgacagaaaatgacgaagga
gagggagaaacctgctctatatgctttgaaccctggaccacttcaggtgaacacagactg
gcaacactgcgttgtggtcacctgttcggcttcacctgtatcgatcgctggctgaagggc
caaggagccaaatgtccacagtgcaataagaaggcaaagagggctgatatcgtcttgctg
tatgcccgtaaacttcgggcagtggacaacacagaacaggagagtttgaagaaatcatta
gaacaggagcaaagtttacggagaaaggcagagctggaatctgcccagtgtcgtctgcag
ttgcaggttgtcacagacgagtgtggaaaactcaaacgagaggttcaggagctaaggagg
ttaatggctcagactgcctcctcttctattcggtctcaggcctctactttgtctctgtct
cagagacaggagtcctcaaacgggggacactatgttttctccaaggctgtccttgtatct
caggcggggggatgtcgggtgatttcttactgtgagccactcagttgcctgttggcatct
caaccctccgctcattccacgttggtccctggcttcggagtaaaaaaaatcagcactgtg
aatctgaaagccagtcattacatacctattcacattaaacagatcaggggcctcgccttt
agcagacatcaagatagtctactgctttctgctgccttcgacaacactatcaaacttacc
agcttgatgaccaacactgtggtacaggcctacaacaccggtaaacctgtctggagctgc
tgctggtcccatgacaacaacaactacatctacgctggtctgagcaatggctcggtgctg
gtgtacgatgtgcgagacaccagcactcatgtacaagagctagcaccactccgctccagt
tgtccagttgtgtccttgtcatacctcccccgtgctgcctccagtctgttcccttctggt
ggcctcattgctggcactcttgaagggggttgtttttgggagcatgtggatggaaccacc
tacagacagcatgttcttcctttagagtctggaggttgcacaaatatccaggtggaacca
gagagcagacactgtctggtcacctatagacctggtcgtgccaacccatctgtgcgttgt
gttctgatggagctgaaccgaagccctcaacaggacgctgcccaaccacctgtctgctcc
tgtgctccagtccagaccttcactgctggatcctcttgcaagctgctcacgaagaatgct
gtattcaagagccctgcaagtgaaggttctacactggtgtgtgctggagatgagggatcc
aattctaccatggtgtgggacgctggtagtggaactttgcttcagaagctccctgcagac
cttccggtcctggacatctgcccatttcagattaaccaggaacactacctagcctctcta
actgaaaagatgataaagatctataaatgggagcagaatgctgacagagggtttgtctga
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