Trichomycterus rosablanca: 134321130
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Entry
134321130 CDS
T09921
Symbol
polr3a
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1 isoform X1
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03020
RNA polymerase
trn04623
Cytosolic DNA-sensing pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
134321130 (polr3a)
09150 Organismal Systems
09151 Immune system
04623 Cytosolic DNA-sensing pathway
134321130 (polr3a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
trn03021
]
134321130 (polr3a)
Enzymes [BR:
trn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
134321130 (polr3a)
Transcription machinery [BR:
trn03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
134321130 (polr3a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
134321130
NCBI-ProteinID:
XP_062858765
LinkDB
All DBs
Position
10:complement(1909882..1929995)
Genome browser
AA seq
1401 aa
AA seq
DB search
MVKDQFRETDVAKKISHICFGMKSAEQMRQQAHIQVVSKNLYSQDTSHTPLPYGVLDHRM
GTSEKDRGCETCGKNLADCLGHYGYLDLELPCFHIGYFKATIGILQMICKTCSRIMLSKE
ERQQFLDHLRRPGLPYLQKRGLKKKISDKCRKKSVCLNCGAFNGPVKKCGLLKIIHEKYK
TTKKVVDPIVSDFLHSFDIAIEHNKEVESLLTRAQENLNPLVVLNLFRRIPNEDVPLLLM
NPEAGKPAYLLLTRLLVPPLCIRPSVVSDLKSGTNEDDLTMKLTEIIFLNDVIKKHRMTG
AKTQMIMEDWDFLQLQCALYINSELSGIPLNMAPKKWTRGFVQRLKGKQGRFRGNLSGKR
VDFSGRTVISPDPNLRIDEVAVPVHVAKILTYPEKVNKANMELMRKLVKNGPDVHPGANF
IQQRHMQMKRFLKYGNREKMAQELKLGDVVERHMIDGDIVLFNRQPSLHKLSIMAHIARV
KPHRTFRFNECVCTPYNADFDGDEMNLHLPQTEEAKAEALVLMGTKANLVTPRNGEPLIA
AIQDFLTAGYLLTLKDTFFDRAKACQIIASILVDKDEKLKIALPRPTIIKPVCLWTGKQI
FSLILKPSKSCPVKANLRTKGKQYCGKGEDLCSNDSFVVIQNSELLSGSMDKGTLGSGSK
NNIFYILLRDWGQVEAADAMSRLARVAPTYLSNRGFSIGIGDVTPGQGLLKAKQELLDAG
YKKCDEYIEALNTGKLQQQPGCTAEETLEALILRELSVIRDHAGSACLRELDKSNSPLIM
ALCGSKGSFINISQMIACVGQQAISGSRVPDGFENRSLPHFEKHSKLPAAKGFVADSFYS
GLTPTEFFFHTMAGREGLVDTAVKTAETGYMQRRLVKSLEDLCSQYDLTVRSSTGDIIQF
IYGGDGLDPAAMEGKDEPLEFKRVLDNIRAVYACSDEPALSKNELVLTSDSIMKRSDFTC
CRDTFLQTMTGTGAQKFIEEIKKFVSGVGEKIKKTRDKYGINDNGSTEPKVLYQLDRITP
TQLERFLETCRDKYMRAQMEPGSAVGALCAQSIGEPGTQMTLKTFHFAGVASMNITLGVP
RIKEIINASKNISTPIITAHLDVEDDADFARLVKGRIEKTLLGEISEYIEEVFLPDDCFI
LVKLSLERIRLLRLEVNAETVRYSICMSKLRVKPGDIAVHGEAVVCVSPRENNKSSMYYV
MQSLKQELPKVVVQGIPEVARAVIHIDEQSGRQKFKLLVEGDNLRAVMATHGVNGSRTTS
NNTYEVERTLGIEAARSTIIHEIQYTMVNHGMSIDRRHVMLLADLMSYKGEILGITRFGL
AKMKESVLMLASFEKTADHLFDAAYFGQKDSVCGVSECIIMGIPMNIGTGLFKLLHRADK
VAPPQRALLFDTSEFHIPLAS
NT seq
4206 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaggaccagttcagagagaccgatgtggctaaaaagataagccatatctgcttc
gggatgaagtcggcggagcagatgcgtcagcaggctcatattcaggttgtcagtaagaac
ctgtacagccaggacaccagccacacccctctgccctatggagtcctggaccaccgcatg
ggaacgagtgagaaggaccgtggatgtgagacgtgtggtaagaacctggccgattgtcta
gggcattatgggtatttggatctggagctgccctgcttccatatcggctactttaaagcc
accatcggcatcctgcagatgatctgtaagacgtgttctcggatcatgctgagtaaggag
gagaggcagcagtttttggatcatctgaggcgccccggtttgccctacctacagaaacga
ggtctgaagaagaaaatctctgacaagtgcaggaagaaaagcgtctgtctgaactgcgga
gcctttaatggtccagtaaagaaatgtggtttgttgaagatcatccatgagaaatataaa
actaccaagaaggtggtggatcccatcgtctctgatttcctgcattcattcgacatcgcc
atcgagcacaacaaggaggtggagtctctgctcacccgagcgcaggagaacttgaaccct
ctggtggtgctgaatctttttcgtagaatccccaatgaggacgttcctctgctgctcatg
aatccggaggcggggaaacccgcgtacctgctcctcacccgtctcctagtcccgcccctc
tgtatccgcccctctgtcgtcagtgacctcaaatcaggtaccaacgaggacgacctgacc
atgaagctcaccgagatcatcttcctcaatgacgtcatcaaaaagcatcgcatgactgga
gctaaaactcagatgatcatggaggattgggacttcctgcagctgcagtgcgctctctac
atcaacagcgaactttcaggaatcccactcaacatggcgcccaagaagtggacccgcggc
ttcgtccagagactaaagggcaaacaaggacgtttccgtggtaacctgtctggtaaaaga
gtggatttttccggaagaacggtcatttctcccgacccgaacctgaggatcgacgaggtc
gccgttcccgttcatgtcgccaaaatcctcacgtacccagaaaaggtaaataaagccaac
atggagctgatgaggaaactggtgaagaacggaccggacgttcatcctggagctaacttc
atccagcagagacacatgcagatgaagaggttcctcaagtacggcaacagggagaagatg
gctcaggagctgaagcttggggacgtggtggagagacacatgattgacggagacatcgtc
ctctttaaccggcagccgtccctgcacaaactcagcatcatggcgcacatcgctcgtgtg
aagccccacaggacgttccgtttcaacgagtgtgtgtgcacaccgtacaacgccgatttt
gatggagacgagatgaaccttcacctgccgcagaccgaggaggccaaagccgaagctctc
gtactgatggggacgaaagctaacctggtgaccccaaggaacggggaacctctgattgct
gctattcaggactttctcacagctggttatcttctcaccctaaaggacacgttctttgat
cgagctaaagcctgtcagatcatcgcctccatcctcgtggacaaagatgagaaacttaaa
attgctctccctcgccccacaatcatcaagcccgtgtgcttgtggacaggaaagcagatc
ttcagtttgatcctgaagcccagtaagagctgcccagtaaaagccaacctgagaaccaag
ggtaaacagtactgcggcaaaggagaggacctgtgttccaacgactccttcgtggtgata
cagaacagtgagttactgagtggcagtatggataagggcacgctgggttcaggatctaag
aacaacatcttctacatcctgctgagagactggggtcaagtggaggcagccgacgccatg
agccgcctggctcgagtcgcccccacctacctctccaatcgagggttctctattgggatc
ggggacgtgacccctggacaggggctgctgaaggctaaacaggagcttctggatgccggg
tacaagaagtgtgatgagtacattgaggccctaaacacgggtaaactacagcagcaacca
ggctgtactgctgaggaaacactggaggcactgatcctgagggaactgtcagtaatcaga
gatcacgctggcagtgcctgtctgagagagctggataagagcaacagtcctctcatcatg
gctctgtgtggatcaaaaggttccttcattaatatttctcagatgattgcctgtgtgggt
cagcaagctatcagcggctctagagtacccgacggatttgagaatcgctccctgcctcac
ttcgagaagcactcgaaacttcctgcggctaaaggcttcgtggcggacagtttttattca
ggtctgacccccactgagtttttcttccacacaatggccggcagggagggtctggtggac
acggccgtcaagacagccgagactggatacatgcagaggcgtttagtgaagtctctggag
gatctgtgctctcagtatgatcttaccgtacgcagctccaccggcgacatcatccagttt
atctacggaggagacgggctcgaccccgcagccatggagggcaaggatgaacccctggag
tttaaaagggtgttggacaacatccgggccgtgtacgcctgttctgatgaacctgctctc
agtaagaacgagctggtgctcacgtctgattccatcatgaagagaagcgacttcacctgc
tgtagagacactttcctccagacaatgactggtactggcgctcagaagtttatagaggaa
atcaaaaagtttgtcagtggtgttggagagaagatcaagaagactcgagataaatatgga
atcaatgataacggatccacggagcctaaagttttgtaccagttggacaggatcactccc
acccagctggagaggtttttggaaacgtgtagggataaatacatgagagctcagatggag
ccgggttcggctgtcggcgctctgtgcgctcagagtattggagagccaggaacccagatg
accctgaagacgttccacttcgctggtgttgcgtccatgaacatcaccctgggagtgcct
cgcatcaaagagatcatcaatgcgtccaaaaatataagcactccaatcattactgctcat
ctggacgtggaggacgatgctgattttgctcgactggtgaagggaaggatcgagaaaact
cttctgggagagatttcagagtatatagaggaggtgtttctgcctgatgactgcttcatc
ctggtcaaactgtctcttgagaggattcgactccttagactggaggtgaatgcagagacg
gtgaggtactccatctgtatgagtaagctcagagtgaagccgggtgatatcgccgttcat
ggtgaagctgtggtctgcgtttctcctcgggagaacaacaagagctccatgtactacgtc
atgcagtctctcaaacaggaactacccaaggttgttgtacaggggatccctgaagtcgct
cgcgctgtgatccacatcgacgaacagagcgggcgacagaagttcaagctgctggtggag
ggagacaacctgcgtgctgtcatggcgacgcacggcgtcaacggcagccgaacgacgtcc
aacaacacgtacgaggtggagagaacgttggggattgaagcagccaggagcaccatcata
cacgagatccagtacaccatggtgaaccacggcatgagcatcgaccgtcgccacgtcatg
ctgctggcggacctcatgtcctacaagggagagattttgggcatcactcggttcggcctg
gcgaagatgaaggagagcgttctgatgctggcgtcgttcgagaagaccgccgatcacctg
tttgatgcggcgtattttggacagaaggactcggtgtgcggtgtgtcggagtgtattata
atgggaatccctatgaacatcggtactgggctctttaaactcctacaccgagctgataaa
gttgctccaccacagagagcgctgctgttcgatacctccgaatttcacatccctctcgcc
tcctga
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integrated database retrieval system
