Trichomycterus rosablanca: 134321275
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Entry
134321275 CDS
T09921
Symbol
nrxn1a
Name
(RefSeq) neurexin 1a isoform X1
KO
K07377
neurexin
Organism
trn
Trichomycterus rosablanca
Pathway
trn04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
134321275 (nrxn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134321275 (nrxn1a)
Membrane trafficking [BR:
trn04131
]
Exocytosis
Calcium ion-dependent exocytosis
Others
134321275 (nrxn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Laminin_G_2
Laminin_G_1
Laminin_G_3
EGF
Syndecan
Motif
Other DBs
NCBI-GeneID:
134321275
NCBI-ProteinID:
XP_062858989
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All DBs
Position
10:complement(19296718..19563784)
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AA seq
1485 aa
AA seq
DB search
MSFSTRNSVHMICIGLLVCCLVDIGASMEFTGAEGQWARFPMWNACCESEMSFNMKTKSA
HGLLVYFDDEGFCDFLELLLHNGRLSLRFSIFCAEPATVLSDTAVNDSRWHSVIVRRNFK
NTTLIVDEEIKWVEVKSKRRDMTVFSHLFLGGIPPELRSSALRLTAASIKDQVPYKGWIT
DLKVNGSEPVLNGSEGISNDICKADHVCLNGGVCNIVNDEPICDCSETGFQGKDCSEADS
PEEVYVGGLAHLMMGDQVREEYVATFKGSEYFCYDLSPNPIQSSSDEITLSFKTLQRNGL
MLHTGKSADYVNLALKNGAVSLVINLGSGAFEALVEPVNGKFNDNSWHDVKVTRNLRQHS
GIGHAMVAISVDGILTTTGYTQEDYTMLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKE
VVYKNNDVRLELSRLAKQGDPKMKVSGMVAFKCENVATLDPVTFETPESFITLNKWTAKK
AGSISFDFRTTEPNGLLLFSHGKPKQQQSKDPKGPKTMKVDFFAIEMLDGHLYLLLDMGS
GTTKTRAVNKKVNDGEWYHVDFQRDGRSGTISVNSVRTPYNAPGESEILDLDDTLYLGGL
PEDRAGLVFPTEVWTALLNYGYVGCVRDLFMDGQSKDIRRLAEAQRAVGVKPSCSKEPPK
QCISNPCLNNGLCREGWNRYVCDCSGTGYLGRSCERDATILSYDGSKFMKIKLPVVMHTE
AEDVSLRFRSQRAYGVLMATTSRNSADTLRLELDGGRVRLTVNLDCIRINCTTSKGPETI
FAGQNLNDNEWHTVRVVRRGKSLKLTVDELQPSEGQITGDHTQLEFHNIETGIITEKLYM
PAVPSNFIGHLQGLSFNGMSYIDLCKNGDIDYCELNAMIGYKSIVADPVTFKSRSSYVTL
PTLQAYYSMHLFLQFKTTSPDGLILYNRGDGNDFIVVELVKGYLHYVSDLGNGAHLIKGN
SNTPLNDNHWHNVMISRDTNNLHTVKIDTKITTQTTTGAKNLDLKGDLYVGGVSKEMYKD
LPKLVHSKEGFQGCLASVDLNGRLPDLLSDALGTAGQVERGCEGPSTTCQEDSCSNQGVC
LQQWEGFTCDCSMTSFGGPLCNDAGTTYIFGRDGGLIVYTWPPNERPSTRADRLAVGFST
QQKDAVLVRVDSSTGLGDYLQLQIEKGNIRVVFNVGTDDINIEETSKFVNDGKYHIVRFT
RSGGNATLQVDDLPVIERYPTGNFDNERLAIARQRIPYRLGRVVDEWLLDKGRQLTIFNS
QNTIKIGGGEQGSRPFQGQMSGLYYNGLKVLNMAAEGEPNVRMQGSARLVGDLPSSSITP
QSSASATGNRSEASPSLTDITTTTASNRQGKQTTTPQDDLLVASAECPTDDEDIDPCDPT
SGGLAHPPLPEAKGYPSPEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSY
HVDESRNYISNSATQPNGAAVKEKPIGVAKISSKNKKNKDKEYYV
NT seq
4458 nt
NT seq
+upstream
nt +downstream
nt
atgagcttctctactcgcaacagtgttcacatgatttgcataggcctacttgtttgttgc
ctggtagacataggggctagcatggagttcactggtgctgaaggtcagtgggcaagattc
ccaatgtggaacgcctgctgtgaaagtgagatgagtttcaacatgaaaacgaaaagtgct
cacggactcctagtgtactttgacgacgagggattctgtgatttcttggaacttcttctc
cacaacggtagactcagtttgcgtttctcaatcttctgcgcagagcctgcaaccgttcta
tccgataccgcggtgaatgacagccgctggcactcagttattgttcgcaggaatttcaaa
aacactacgttaattgtggacgaagaaatcaagtgggtggaagtgaagtctaaaagaagg
gacatgactgttttcagtcatttgtttttaggagggatacctcccgaactgcgatcttca
gctttgcgcctcacggctgcgtctatcaaagaccaggttccatataaaggatggataacc
gatttgaaggtgaatggctctgaaccagtgctaaatggtagcgaggggatcagcaatgac
atttgtaaagcggaccatgtttgccttaacggaggagtttgcaacatcgtaaacgatgag
cccatatgtgattgttctgaaacaggattccaagggaaagactgcagtgaagccgattct
ccagaagaggtctacgttggaggtcttgcgcacctgatgatgggcgaccaagtgagagag
gagtacgtggcgaccttcaagggctcagagtacttctgctacgacctgtctcccaaccct
atccagagcagcagcgacgagatcacactttccttcaaaaccctgcaacgcaatggcctg
atgctccacactggcaaatcagccgactacgtcaacctggcactgaagaacggtgccgtc
tcgctggtcatcaacctgggctccggggcctttgaggccctggtggagcctgtgaatggg
aaatttaatgacaattcctggcatgatgtgaaggttaccaggaatctccgtcagcactca
ggcattggacacgctatggttgcaatatccgtggatgggattctcaccaccactggatat
acccaagaggactacaccatgctaggctccgatgactttttctatgttgggggcagtccc
agcactgcagatctacctggatctcctgttagcaacaactttatgggctgccttaaggag
gtagtgtataagaacaatgacgtaaggctagaactttctcgtctggccaaacaaggtgat
cccaaaatgaaggtcagtggaatggtggctttcaagtgtgagaacgtggccacgctggac
cccgtcacttttgagacacctgagtcctttataaccctcaacaagtggacagcaaaaaaa
gctggctccatttcatttgatttccgcaccactgagcccaacggactgctgctcttcagc
cacggcaaacccaagcaacagcagtcgaaagacccgaaaggccctaaaaccatgaaggtg
gatttctttgctattgaaatgctggatggtcacctctaccttctactggacatgggctca
ggcaccaccaaaaccagggccgtcaacaaaaaagtcaatgatggagaatggtaccatgtg
gacttccagagagatggcagatcaggcactatctctgtcaactctgtgcgcactccttac
aatgctcccggtgagagtgagatcctggacctggatgacaccctctaccttggtggtttg
ccggaggatcgtgctggcctggtttttcccaccgaggtgtggacagctctgctaaactat
ggctacgtaggctgtgtgcgggatctcttcatggatggccagagcaaagacatccgacga
cttgccgaggctcagagagctgtgggtgtcaagccgtcttgctctaaggagcctcctaag
cagtgcataagtaacccatgtcttaacaatggcttatgcagggagggctggaaccgctat
gtgtgtgactgctctgggactggctacctgggacgttcctgtgaaagagatgccactatc
ctcagttatgatggcagtaagtttatgaagatcaagttgccggtggtgatgcatactgag
gctgaggacgtatccctgcgcttccgatctcagcgggcttatggggttttgatggccacc
acctctcgcaactctgcagatacacttcggttagaactggatggaggacgggtccgactc
acagtcaatctagactgtatcaggattaactgtaccaccagtaaaggtccagagaccatc
tttgcgggtcaaaatctaaatgataatgagtggcacacagtccgtgtggtcaggaggggg
aaaagcctgaagttaacggtggatgaactgcagccctcagaaggccaaatcacaggtgac
cacacacagctcgagttccataacatagagacaggcatcattactgagaagctctacatg
cccgctgtgccctccaattttatcggacacctgcagggactgtccttcaatggcatgtcc
tatattgacctgtgcaagaacggagacatcgactactgtgagcttaatgccatgatcggc
tacaaaagcatcgtggcagacccagtgaccttcaagtctcgctccagctatgtgaccctg
cccacgctacaggcctactattccatgcacctcttcctccagttcaaaaccacctcccct
gatggcttgatcctctacaaccgaggagatggaaatgacttcattgtggtggagcttgtc
aaagggtaccttcactatgtttctgacctgggaaatggtgcgcacctcataaaaggaaat
tccaacacacctctcaatgataaccactggcataatgtgatgatttcacgcgataccaac
aacctccacacagtcaagatcgacaccaagattaccacacaaacaactacaggggcaaag
aacctggatctaaaaggtgatctatacgtgggtggggtctctaaggagatgtataaggac
ctcccgaagctggtacattctaaagagggttttcagggctgcttggcatcggtggactta
aatggacgtttgccagacttactatcagatgcactgggcacagcgggccaggtggagcgg
ggttgtgaaggtcccagcactacctgtcaggaggactcatgctccaatcagggggtgtgt
ctgcagcagtgggagggcttcacctgtgactgcagtatgacgtcgttcggaggaccattg
tgcaacgacgcgggaacgacgtacatatttggtcgggatggtgggctgattgtgtacacc
tggcctcccaacgaaaggccgagcacgagggctgacagactggcagttggcttcagcaca
cagcaaaaggatgcggtgttggtccgagtggacagctcaactggactcggagactacctg
caactacagatagaaaaaggcaatatcagggtggtgttcaatgtgggcacagatgacata
aatatagaagagacctcaaagtttgtaaatgatggaaaataccacatagttcgctttacg
cggagtggtggtaatgccactttgcaggtggatgatctgccagtcattgaacgataccca
acaggcaactttgataacgaacgcctggcgattgctagacagcgaatcccatatcgtctt
ggtcgagtagttgacgaatggctactcgacaaaggtcgacagctcaccatcttcaacagc
cagaataccataaagatcggtggtggggagcagggcagtcgcccatttcagggccagatg
tctggcctctactacaatggcctcaaagtgctcaacatggccgccgagggtgaaccgaat
gtccgcatgcagggtagtgcccgcctggttggtgacctaccctcctcttctattacaccc
caatccagtgcttcagctacgggcaaccgctctgaagcatcaccctcactgactgacatc
accaccaccactgcatccaaccggcagggcaagcagaccacaacaccacaggatgatctg
ttggtagcatcagcggagtgtcctactgatgatgaggacattgacccatgtgacccaacc
tcaggtgggttagcacaccctcccctgcctgaagcaaagggttacccaagcccagaggtg
atccgcgagtccagcagcaccacaggcatggtagttggcattgtagcagctgcagccctg
tgcatcctcatcttactctacgccatgtacaagtaccgcaaccgagacgagggctcttat
cacgtagacgagagccgcaattacatcagtaactctgccacgcagcccaatggagctgcc
gtaaaagaaaaaccaattggcgtggccaagatctccagcaagaacaaaaagaacaaggat
aaagagtactacgtctga
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