Trichomycterus rosablanca: 134321290
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Entry
134321290 CDS
T09921
Symbol
cdh12b
Name
(RefSeq) cadherin-12
KO
K06804
cadherin 12, type 2, N-cadherin 2
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
trn04515
]
134321290 (cdh12b)
Cell adhesion molecules [BR:
trn04515
]
Cadherins
Major cadherins
134321290 (cdh12b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_CELSR2_9th
Cadherin_4
Stevor
DUF443
ASFV_J13L
Motif
Other DBs
NCBI-GeneID:
134321290
NCBI-ProteinID:
XP_062859012
LinkDB
All DBs
Position
10:21174933..21336812
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AA seq
813 aa
AA seq
DB search
MLKSNCLLLFLCFLFEKGPSAPLHSGPTTQNQSRPVPNWPHNSASMSRAGHSGGNGGFQR
VKRGWVWNQFFVLEEYMGSDPQYVGKLHTDLDKGDSVVKYTLSGDGAGTIFTIDQTTGDI
HALRSLDREEKPYYTLRAQAVDIHTNRPLEPESEFIIKVQDINDNEPKFLEGPNTASVPE
MSPVGTYVTKVTATDADDPTYGNSAKVVYSILYGQPYFSVDPETGIIRTALPKMDREVKE
LYQVLIQAKDMGGQLGGLAGTTTINITLSDVNDNPPRFSKNTFHLRVPESSVVGSSVGKI
QAHDLDIGKNAEVEYTIVPGDGGVMFDIVTNEHNQEGIIILRRPLDYETKKAYTFTVEAS
NAHIDPRFHSFGPFKDTATVKINVLDVDEPPVFSKFSYTMDVYEDTPAGTIIGAVTAQDL
DAGSSPVRYSIDWKSDLDSYFDIDPVIGTISTNELLDRENRAQHNISVVATKVNNPVLSS
KVSVNVQVLDVNEFPPELAIPYETYVCEGAKVGQVIQVISAQDQDLPMVEQKFSFKLPPE
EINNKNFTIKDFRNNTAGIVTLRSGFRRRAQEIYHLPVIIEDSGYPTQSSTSTLTIRVCG
CDSNGFLLTCSAEAIFLPVGLSTGALIAILLCIIILLVIVVLYMGVRKQKKKETLMTSKE
DIRDNVIHYDDEGGGEEDTHAFDISTLRNPKAVKENRFRRDVKPEASSVPQPPVVSQDSS
DLQKFISQKLQTYDGDNSAPPYDSLATYAYEGEGSVAESLSSIESLHGETEEDYNYLNEW
GPRFKTLAGIFGECSQSQTDITSTSTTTTENKH
NT seq
2442 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagagcaactgcctgctgttgttcctgtgcttcctgtttgagaagggcccttct
gctcctctccactcagggcccacaactcaaaaccagagtaggccagtgcctaactggccc
cataattcggcctccatgtcaagagcggggcacagtggaggaaatggaggtttccagagg
gtcaagagaggatgggtatggaaccagttttttgtcctggaggagtacatgggatccgac
ccacagtatgtgggcaagctacacacagatctggataaaggggacagcgtggtgaaatac
actctctcaggagacggagccggcaccatcttcaccattgatcagacaactggagacatt
catgccttacgcagcctggacagagaggagaagccttattacacgcttcgagcccaggct
gtggatatccacaccaaccggcccctggagcctgagtctgagttcattatcaaggtgcag
gacatcaatgacaatgaaccgaagtttctggagggccctaacacggccagcgtacctgaa
atgtctcctgtgggcacatatgtgacaaaagtaacagcaacggatgcagacgatccaact
tatggcaacagtgcgaaagtggtgtacagcatcctctatggccagccatacttctctgtg
gatcctgaaacagggattatcagaactgctctacccaaaatggatcgagaagtgaaggag
ctctatcaggttctcatccaggccaaagacatgggaggccagttgggaggtctggctgga
accaccaccatcaacatcaccctaagtgacgtcaatgacaacccacccagattctccaaa
aatacgttccacttgcgtgtgcccgagtcctcagtggtgggctcttcggttggcaagatc
caagcccacgatctcgacattggcaagaatgctgaggtagaatatacaattgtccccggg
gatggaggagtcatgtttgacatcgtgactaatgaacacaaccaggagggcatcattatt
ctcagacggcctctcgactatgagacaaaaaaggcctatacattcacagtggaggcatca
aatgcacacatagatccccgctttcatagctttggtccatttaaagacaccgcaacagtc
aagattaatgttctggatgtggatgagcctcctgtattcagtaagttctcctacacgatg
gatgtttatgaggacacaccagcgggcactattataggagcagtgaccgctcaagatctg
gatgcaggaagcagcccggtcaggtattcgattgactggaagagtgacttggatagctat
tttgacattgaccctgtgattggcacgatctccaccaacgagcttttggacagagagaac
agagcccaacataacatttcagttgtggcaaccaaagttaataatccagtcctgtccagc
aaagtgtccgtcaatgttcaagtgctggatgttaatgagtttcctccagagttggcgata
ccatacgagacctatgtgtgtgaaggtgctaaagtaggtcaggtgattcaggtcatcagt
gcacaagaccaggaccttccaatggtggaacaaaaattctccttcaaactgccaccagaa
gagataaacaacaagaactttaccatcaaagatttcagaaacaacacagcagggattgta
accttacgtagcggtttccggcgccgtgctcaggagatctaccacctccccgtgataatt
gaggacagtggttacccaacacagagcagtacgagcactctgaccattcgtgtatgtggc
tgtgattctaatggcttcctgctgacctgtagtgcagaagccatcttcctcccagtggga
ctcagtactggagcactaattgcaatcctgctttgcattattatactattggtgattgtt
gtgctgtacatgggggtgcgcaagcagaagaaaaaggagacgctaatgacctcgaaagag
gacatccgggacaacgttatccactatgacgacgaaggtgggggcgaggaggacacccat
gctttcgacatcagcacacttcgaaaccctaaagctgtcaaagagaaccgctttcggcgt
gatgttaaaccagaggccagctctgttcctcagccaccggtggtctcacaggacagttca
gacctccagaagttcatcagccaaaagttgcaaacatatgacggagataactccgctcct
ccttatgactcactggccacctacgcttacgagggtgagggatctgtagccgagagccta
agttcaatagagtcgttacacggtgagacagaggaggattacaattacctcaatgagtgg
ggacctcgctttaaaaccctcgcagggatttttggagaatgttcacaaagtcagacagat
atcacgtccaccagcaccaccaccactgaaaacaaacattga
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