Trichomycterus rosablanca: 134321296
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Entry
134321296 CDS
T09921
Symbol
zeb1b
Name
(RefSeq) zinc finger E-box-binding homeobox 1b
KO
K09299
zinc finger homeobox protein 1
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134321296 (zeb1b)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ZF
134321296 (zeb1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2
zf-C2H2_4
zf-C2H2_jaz
zf-Di19
zf-met
Homeodomain
zf-C2H2_15
Zf-C2H2_ZNF451_C
DUF6801
Zn_SUZ12
zf-C2H2_6
Motif
Other DBs
NCBI-GeneID:
134321296
NCBI-ProteinID:
XP_062859019
LinkDB
All DBs
Position
10:complement(22271949..22350297)
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AA seq
1106 aa
AA seq
DB search
MADGPRCKRRKQANPKRTSVSNYSHALEGQSDSDDEDKLHIVEEEGPTMDGADGDSIAHD
EELNGPEDRWDDVKEECVSEEDERSRDALVEEMLQQEDTAVIFPEAPEDEARQGTPETSG
HDENGTPDAFSQLLACPYCSRGYKRYTSLKEHIKYRHEKSEDNFSCSLCSYTFTHRTQLD
RHMSAHKAGRDQRHVTQAGGGGNRKFKCTECGKAFKYKHHLKEHLRIHSGEKPYECSNCK
KRFSHSGSYSSHISSKKCIGLISVNSRTRPSPTTGGTKTPQCPSPSLPSSPATARTQPRD
KLDHSKPLQEQIPITQIKSEPLDYEYKPVVVAPTAPGGVNGVFQGGATAPLQGTVQAVVL
PTVGLVSPISINLGDLQNMLKVAVDGNVIRQVLENAQAKGQPAAVGIPGRVAITQASQQV
IQAISLPIVDQDGTTKIIINYSLDTLQAQTALQNLKKEPVGQDNCKVEKLPEDLTVKSKT
TRDKTSITVDNEKQQDKDTLYNHLMNKYCDMEEQEVNGKHLDEKSDVDIGLCPGKPPLKN
LLSLLKAYFALNAEPTKEELAKISESVSLPTEVVRKWFEKMQSGQISMDTLPDTPKNEQT
NGIDINGNSEKTLMSEEDKEIELKEQKELHSPAEGTTAGISGTEYGPVSPLPLNLSADGP
VPAQTAEEGEGPLDLSLPKSIVTAIATSPHAKSVYSAQNEPLNLTCTKKEVLSNASTSAA
NYASQTSVNPLNIVTTQLPTLVAIADQGHGQCLRALTTTKHTILIPQLAYTYTTTASSPA
GGDMPQKSILQVNGIKEENHETGLEMALVLEEQTDSDSGPMRKKMKKTENGLYACDLCDK
IFQKSSSLLRHKYEHTGKRPHECGICSKAFKHKHHLIEHLRLHSGEKPYQCDKCGKRFSH
SGSYSQHMNHRYSYCKKEANGQNLLQRDEEEQNHSEDRPRPGSTDDSPPSQLDSDERGSS
AEEEDEMGSGSMIDEEEIQVVRIGEEGGRDEEDEEQEATEDMDTGAEEAVRENGEHTEEG
TEEEQKLLGENEEEDGEMVKVVVMQDSEEEENKTEEEQTESMKETDTQENIEQEQAEDGG
ERSEAENVKENCVSEGKPSSKNGDVK
NT seq
3321 nt
NT seq
+upstream
nt +downstream
nt
atggcggatggccccaggtgtaagcgcagaaaacaggcgaaccccaaaagaaccagtgta
agtaactacagccatgcactggaaggccagtcagactccgatgatgaagataagctgcat
attgtggaggaagaggggccaaccatggatggagctgatggtgacagcatagcccatgac
gaagagcttaacggccctgaggacagatgggatgatgtaaaagaggagtgtgtatcagag
gaggatgagaggagtagagatgctctggttgaggaaatgctccagcaggaagacacagct
gtcatctttccagaagcaccggaagatgaagcacgtcagggcacaccagaaacaagtggc
catgatgaaaacggaacaccagatgcattctctcagctcctcgcctgtccatactgctct
cgtggctataagcgctacacatctctaaaagaacacatcaaataccgacacgagaagagt
gaggataactttagctgctcactgtgcagctacacctttactcatcgtacacagctcgac
cgacacatgagcgcacacaaagcaggcagagaccagcggcatgtaacccaagcagggggt
ggaggaaaccgtaagtttaagtgcactgaatgtggcaaagccttcaagtacaaacaccat
ctgaaggaacacctgcgaatccacagtggagagaaaccatatgagtgctccaactgtaag
aaacgcttctcgcactctggttcctacagctcccacatcagcagcaagaaatgcatcggc
ctcatttccgtcaacagccgcacacgaccctccccaaccacagggggcactaaaacgccc
cagtgtccctcaccatccctgccctcctctcctgccactgcccggactcagccccgggac
aaactggaccatagtaagcccttgcaggagcagattcccataacacagattaagtctgag
ccattggactatgagtacaagcctgtggtagtggccccaactgccccaggaggagtgaac
ggggttttccagggtggagcaacagctcccctccagggaacagtacaagctgtggtcctc
ccaactgtcggcctggtctcaccaatcagcatcaacctgggggacctgcagaacatgctg
aaggtggcagtggatgggaatgtgatcaggcaggttttggaaaatgcccaggccaagggt
caacctgcagcagtgggaatcccaggcagagttgccattactcaggcttcacagcaagtc
atccaagccataagtcttcccattgtagaccaggatggtaccaccaagatcattatcaac
tacagtctggacaccttgcaggctcagacagccctgcagaacttaaagaaagagcctgtt
gggcaggacaactgcaaggttgagaaactacctgaggacctaacagttaaaagcaagaca
accagagacaaaactagcatcactgtggataatgaaaagcagcaggacaaggatacactc
tacaatcacctaatgaacaaatactgtgacatggaggaacaagaggtcaatgggaaacac
ctggatgagaagtctgatgtagacattggactctgtccaggcaaacctccgctgaagaat
ctactgtccttgcttaaagcttactttgctttaaacgcagaacctaccaaggaggagttg
gctaagatctcagaatcagttagtctccctactgaggttgtcaggaagtggtttgagaag
atgcagagtgggcagatatctatggacactcttccagacacacccaagaatgaacaaacg
aatgggattgacattaatgggaattcagagaaaactcttatgtcagaggaggacaaagaa
attgaactaaaggagcagaaggaacttcacagcccagctgaaggcactacagctggtata
agcggaacagagtatggccctgtatctcctttaccactaaatttatctgcagatgggcct
gtgccagcccagactgcagaggaaggcgagggacctcttgatttgtctcttccaaaatcc
atagtcacagccattgcaaccagcccccatgcaaaatctgtttactcggctcagaacgag
cccctgaacttgacttgcactaaaaaggaagtgctgagtaatgcaagcaccagcgctgcc
aactatgccagccaaacaagtgtcaatcccttgaacattgtaaccactcaactgcccacc
ctggtggctattgctgatcagggccatggacagtgtctgcgtgcccttaccaccactaaa
cacaccattctaatccctcagctagcctacacctacaccactacagcctccagcccagca
gggggtgacatgccacagaagtctatactgcaagtcaacggcatcaaggaggagaaccac
gagacaggtttagaaatggccttagttctggaggagcagaccgactcagactccgggccg
atgaggaagaaaatgaaaaagacagaaaatggtttgtacgcctgtgacctatgtgacaaa
atcttccagaagagtagctcgctgcttcgacataaatatgaacacacaggtaagcggccc
catgagtgcgggatttgcagcaaagcttttaaacataagcaccacctgatcgagcacttg
cgtctgcactcaggagaaaaaccgtatcagtgtgacaagtgtggcaagcgcttctctcac
tccggctcctactcgcagcacatgaaccaccgctactcctactgcaagaaggaggcgaac
gggcagaacctgctacagcgggacgaggaggagcagaaccacagcgaggatcgacctcga
ccaggcagcactgacgattcacccccatctcaactggactccgacgagcgaggtagcagc
gcggaagaggaggacgagatgggctcagggagcatgatagacgaggaggagatacaggtg
gtgaggataggtgaggaaggcgggagggacgaggaggatgaagagcaggaggcaacggag
gatatggacactggagctgaggaagccgttagagagaacggagaacatacggaggagggc
acagaggaggagcagaagttgctgggggaaaatgaagaggaagatggagagatggtgaag
gttgtagtgatgcaggacagtgaggaagaagagaacaaaacagaggaagaacaaacagaa
agcatgaaggaaacagacacgcaggaaaacatcgaacaggaacaagcagaggatggagga
gagaggagtgaagctgaaaatgtgaaggagaactgtgtaagtgaaggaaaacctagcagt
aaaaatggagacgtcaaatga
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integrated database retrieval system
