KEGG   Trichomycterus rosablanca: 134321332
Entry
134321332         CDS       T09921                                 
Symbol
vti1a
Name
(RefSeq) vesicle transport through interaction with t-SNAREs homolog 1A isoform X1
  KO
K08493  vesicle transport through interaction with t-SNAREs 1
Organism
trn  Trichomycterus rosablanca
Pathway
trn04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:trn00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    134321332 (vti1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:trn04131]
    134321332 (vti1a)
Membrane trafficking [BR:trn04131]
 SNARE
  SNAP-25[N] (Qb)
   Vti1
    134321332 (vti1a)
SSDB
Motif
Pfam: V-SNARE V-SNARE_C Mer2 Sec20 Laminin_II Sec8_N CAP59_mtransfer DUF1664 DUF6097
Other DBs
NCBI-GeneID: 134321332
NCBI-ProteinID: XP_062859097
LinkDB
Position
10:complement(26113987..26311033)
AA seq 224 aa
MSSDFESYEQEFGTLTAEVTNKIGKIPKLSGEDKTQLVLNVDKQLEEVRELLEQMDLEVR
EIPIQSRGMYNSRLKSYKQEVEKLEKDFKRSRIAYSDEVRNELLGDDGSSSESQLIKLRE
ERAHLLDNTEKLERSSRRLEAGYQIAVETEQIGQEILNNLHSDREKVQRSRDRLRETDAN
LGKSSRILSGILRRVIQNRILIFILGAIILLTIVLAIYFNLRGH
NT seq 675 nt   +upstreamnt  +downstreamnt
atgtcgtcggattttgaaagctacgagcaggagtttggtaccctgacagcagaagtcacc
aataaaataggaaaaattccaaaactcagtggagaggacaagacgcagctggttctaaat
gtcgacaaacagctcgaggaagtcagagagttgttggagcagatggacctggaggtgcga
gagatccccatccagagcagaggaatgtacaacagccgtctgaaaagctacaagcaagag
gtggagaagctcgagaaggacttcaaaaggtcacgtattgcctacagtgatgaggtgcgg
aacgagctcctcggggatgacgggagctcctctgagagtcagctgataaagttacgtgaa
gagagagctcatctgctggacaacacagagaagctggaaaggtcatctcggagactggag
gctggctaccagatagcggtggaaaccgaacaaataggacaggagatcctaaacaatctg
cacagtgatcgagagaaggtccaaagatcccgagatcggttgagagagacggatgctaac
ttgggcaagagctcgcgtatcctgtcaggcattctaagaagggtcattcagaatcgcatc
ctgatcttcatcctgggcgccatcatcctcctcaccatcgtcctggccatctatttcaat
ctgcggggccactga

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