Trichomycterus rosablanca: 134321405
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Entry
134321405 CDS
T09921
Symbol
gspt1
Name
(RefSeq) eukaryotic peptide chain release factor GTP-binding subunit ERF3A
KO
K03267
peptide chain release factor subunit 3
Organism
trn
Trichomycterus rosablanca
Pathway
trn03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
134321405 (gspt1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134321405 (gspt1)
03012 Translation factors [BR:
trn03012
]
134321405 (gspt1)
Messenger RNA biogenesis [BR:
trn03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
134321405 (gspt1)
Translation factors [BR:
trn03012
]
Eukaryotic type
Release factors
134321405 (gspt1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
PAM2
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
134321405
NCBI-ProteinID:
XP_062859219
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All DBs
Position
10:30857690..30869576
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AA seq
563 aa
AA seq
DB search
MDQRDSAPECWEEDDVEAQAEADLQSAFTGLNVNAPEFVPSFIQQAAPHSTASPGADTVT
NMEISEPTAAVENGETDATTADTWEEKSEPVDSEAGGGVMEESGALRDEAQDELMEEDEE
MPTPKLPPPPPDAPKKEHVNVVFIGHVDAGKSTIGGQIMYLTGMVDKRTLEKYEREAKEK
NRETWYLSWALDTNQEERDKGKTVEVGRAYFETEKKHFTILDAPGHKSFVPNMIGGASQA
DLAVLVISARKGEFETGFEKGGQTREHAMLAKTAGVKHLIVLINKMDDPTVNWSLDRYEE
CKEKLVPFLKKVGFNPKKDIHFMPCSGLTGANLKESSEMCPWYTGLPFIQHLDSLPSFNR
SSDGPIRLPIVDKYRDMGTVVLGKLESGSISKAQQLIMMPNRHTVEVLSLLSDDVETDDA
EPGENLKLRLKGIEEEEILPGFILCNAENLCHSGRTFDAQIVIIEHKSIICPGYNAVLHI
HTCIEEVQITALICLVDKKTGEKSKTRPRFVKQDQVCIARLKTAGTICLETFKDFPQMGR
FTLRDEGKTIAIGKVLKLVPEKD
NT seq
1692 nt
NT seq
+upstream
nt +downstream
nt
atggatcagagagactcggccccggagtgctgggaggaggacgacgtggaggcccaggcc
gaagccgatctgcagtccgccttcaccggcctcaacgttaacgctccggagttcgtaccg
tccttcatacagcaagcagccccgcacagcaccgcgtctcccggtgcagacacagttaca
aacatggagatctcagaaccaacagctgctgtggaaaatggagagacggatgctaccaca
gcggacacatgggaggaaaaaagcgagcctgttgattcagaggcaggaggtggtgtcatg
gaggagagtggggcccttagggatgaagcccaagatgagttgatggaggaagatgaggaa
atgcccacgcctaaactgccccctcctcccccagatgctccaaagaaagaacatgttaat
gtggtattcatcggacatgtggatgctggcaagtcaacaattggcggacaaatcatgtat
ttaactggtatggtagacaaaagaacactggagaaatatgagagggaagctaaagaaaag
aacagagaaacatggtatctttcctgggctttagatacaaaccaagaagagagagacaaa
ggaaaaactgtagaagtaggaagagcgtactttgagacagagaaaaaacactttaccatt
ctggacgcccctggacataagagctttgtacccaatatgatcggtggagcctcacaggct
gacctggctgtactggttatctcagctagaaagggtgagtttgagaccggctttgaaaaa
ggaggtcagactcgtgagcatgccatgctcgccaaaaccgctggagtcaaacatctcatt
gtcctaatcaacaaaatggatgatcccactgtaaactggagcttggacaggtatgaggaa
tgtaaggagaaattagtgccatttctgaagaaggtaggcttcaatccaaaaaaagacatc
catttcatgccctgctctggattaacaggagccaatttgaaggaatcgtccgaaatgtgc
ccttggtatacggggttaccgtttattcaacatctggacagcttgccaagtttcaacaga
tcaagtgatggtcccatcagattgcccattgtagataaatacagggacatgggcactgtg
gtccttggaaaactagaatcagggagtatcagcaaagcacaacagctcatcatgatgcca
aacagacacactgtggaggtgctgagcctgctgtctgatgatgtcgagacggacgatgca
gaacctggagagaacctgaagctgcggctcaaaggcatagaagaggaggagatcctgcct
ggcttcatcctatgcaatgctgagaacctctgccactctgggcgcacgttcgacgcacag
attgtcataatcgaacacaaatcaattatatgtccaggttacaatgcagtcctacacatc
catacctgcatagaggaagtgcagataacagccttaatttgtctggtggacaagaagaca
ggggagaagagcaagacacgtccacgctttgtgaaacaagaccaagtatgcattgctcgt
ctcaaaactgctgggacaatctgcttagaaacgttcaaagattttccccagatgggtcgg
ttcacgctgagggatgagggcaaaactattgctattggcaaggtgttgaagttggtacca
gagaaggactaa
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