Trichomycterus rosablanca: 134321411
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Entry
134321411 CDS
T09921
Symbol
mgrn1a
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn04120
Ubiquitin mediated proteolysis
trn04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
134321411 (mgrn1a)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
134321411 (mgrn1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134321411 (mgrn1a)
Enzymes [BR:
trn01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
134321411 (mgrn1a)
Ubiquitin system [BR:
trn04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
134321411 (mgrn1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
134321411
NCBI-ProteinID:
XP_062859226
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All DBs
Position
10:31342995..31368274
Genome browser
AA seq
557 aa
AA seq
DB search
MGSILSRRIAGVEDIDIQANSAYRYPPKSGNYFTSHFFMGGQKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPSEPVKTLRSLVNIRKDSLRLVRYKDEAESTVEEAGGSGVTYGV
EFCFDTDARVAITIYCQAFEEFSNGMAVYTPKTPAMASETVCYKKGINQQFSLPSFKIDF
AKWKAEELNFDLDRGVFPLVIQAVVDDGDDVIGHAHVLLAAFDKHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKSPEDENSDNSSECVVCLSDLRDTLILPCRHLCLCNAC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPAAVLHSVPFSPVVSQSSDHTENSNSDNIP
PGYEPVSLLEALNGVQPASPSLPSAPLYEEVRFSGEMGDPLNLSSRQQSPVDLSADTATL
KSKVSKSPNGSICSPSSPIQEEEDEERLSELTDAQSHSDQPYSPDPTEVTVDEIASEPGS
PNTGSEGRSLGVSVSEILQDCHSARSSLTESDPSADLALPGSSRSIDSLQSQSTSSSSQP
LLCMSSSLHVEDERLSP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgggttcgatactcagccgaaggatcgccggagttgaagacatcgacattcaagccaat
tcagcttacagatatcctcctaaatcaggaaattattttaccagccatttctttatggga
ggccagaaatttgacacccctcaccctgagggatatctgtttggagaaaatatggatttg
aattttttagggaacaggcctgttcagtttccctatgtgacacctgcacccagtgaacct
gtgaagacgcttagaagtctggtgaacatcaggaaagactctttacgacttgttaggtat
aaggatgaagctgaaagcacagtggaggaagctggaggttcgggggttacgtatggtgtg
gagttctgttttgatactgatgccagagtggccatcacaatatactgccaggcttttgag
gagttttctaatggcatggcagtgtacactcctaaaaccccagctatggcatctgaaact
gtctgttataagaaagggataaaccagcagttttcattgccatcctttaagattgatttt
gctaaatggaaagcagaggagcttaattttgacctggatagaggtgtgtttcctctggtg
attcaggcagtcgtggatgatggggatgatgttattggacatgcccatgtgcttttggca
gcatttgataagcatgttgatggcagtttttcagtgaaacctttgaagcagaagcaaatt
gttgatcgtgtcagttaccttcttcaagagatttatggcattgagaataagaacaaccag
gagacaaagtctcctgaggatgaaaacagtgacaacagtagtgagtgtgtggtgtgtcta
tcagacctacgtgacacactcatcctcccctgcagacacctttgtctctgcaatgcgtgt
gctgacactctacgttaccaagccaacaactgtcctatctgcagactgccatttagagca
ctgctccaaattcgtgcagttcgcaagaagcctgctgcagtgcttcattctgtccctttc
agtccagtggtctctcagagctcagaccacacagagaattcgaactcggataacattcct
ccaggctacgagcctgtgtccttactggaggccctaaacggtgtacagcctgcttcaccc
tctcttccctcagcccctttgtatgaggaggtgcggttttcaggagagatgggtgaccca
ctgaacctgagcagtaggcagcagagcccagtggatctcagtgcagacacagcaacgtta
aaatccaaagtcagcaagtcaccaaatgggtctatatgctccccttcatctccgattcaa
gaagaggaggatgaggaaaggctgtccgagctgactgatgctcagtctcactctgatcag
ccctacagtccagatcccactgaggtaacagtagatgagatcgcgtctgaaccaggctct
ccaaacacaggttcagagggaaggtcactgggggtgtcggtgagtgagatattgcaggac
tgccacagtgcccgcagcagcctcactgaaagcgatccttcagcagacctggcactgcct
ggatcatccaggtccatcgatagtctacagagtcagagcaccagcagctccagtcagcct
ctgctctgcatgtctagcagcctgcacgttgaagacgaacgcctcagcccatag
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