Trichomycterus rosablanca: 134321428
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Entry
134321428 CDS
T09921
Symbol
usp42
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 42
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
trn01002
]
134321428 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
trn04121
]
134321428 (usp42)
Enzymes [BR:
trn01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
134321428 (usp42)
Peptidases and inhibitors [BR:
trn01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
134321428 (usp42)
Ubiquitin system [BR:
trn04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
134321428 (usp42)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
134321428
NCBI-ProteinID:
XP_062859252
LinkDB
All DBs
Position
10:32325550..32336474
Genome browser
AA seq
1136 aa
AA seq
DB search
MTIVDKPSEKSDFESVRCTHSGSLTPFSSGDMDGNSSSWSVNSHASEILRAKAACTAPSI
GAAVYTTALPTEKCQEQVGMTCGDGIAVPQKVLFPPERLNLKWNQVHRVGAGLQNLGNTC
FLNSALQCLSYTAPLSNYMLTREHSKSCREPGFCMMCTMQNHITQVFANSGNVIKPIGVL
NELKRIAKHFRYGSQEDAHEFLRYTVEAMQKSCLPGNILDRQTQATTLVHQIFGGYLRSR
VKCLNCKAVSDTFDPYLDIALDIKTAPTITKALEQFVKPEQLDGDNAYKCSKCMKMVHAS
KRFTIHRSSNVLTISLKRFANFNGGKIAKDVRYPEYLDLRPYMSQSQGEPLLYGLYAVLV
HAGFSCYAGHYYCYVKASNGQWYQMNDSSVSVSDIRSVLNQQAYLLFYSRSADLKNGDFN
HVNRNTGQSSPRPLTTPKTNGLQYTSQSFIGPQLPPHLVKKYVNGNVSSKEYQSGSKPNS
NNPSGVTKINSTPSSSFSSCSSSTSNQLVRPTSIPEPQKRPKLTIHIGQGKLVRPNQSQS
SSGCPLSSASQSRSQSTNSSSSTSQSTSESPAQVNGTPANHSAAFLVPYSQESSEDSDKD
DGVLDNGTTKPYSVAKAACKKDGTDRPCSDSLSSKTNGSHTSEAYTCENGSGHSGQNGHQ
VNGFTHSKQLTESPTSESSLTSDTDSSDSQLRQSVSSSKLDGVLIPSPSTERAKPVCNSD
TQPAIQGSATSTLVKPLGLMDQTSTQAALPNGSGQVGGMTESPPTSQGLSPQRSDGLAVL
NGPERAAQVLGGGNKTSPSVKPNSWDENVPTDDQDQLSDTFTKGKNGDKDSHRHYRECRD
RSKERYGGSHRSDREYRPPKERSSSREKRYREVDRYRDRHAYNRRHYYYHKRDRGERLHD
WQRDKDKRYQTSNYDSHRYLDHHYRDGGSSHWRHVQEDRRDRWHYNREQLSSSRSKSPSP
YHGTRKRRHSDEDSASEERRARKSKKSKKKSKEKHREYEKEISDRSGDSSSRRHKSKKKK
RRRRYDSEERNHTDSHSTHSSEKQDSKSRSGEERESRKHRCSSDREHSPPRAKRVNTEDH
HQPNGHSDSGINHSNGSVYGFCQNGMDELVKYKHMNHTSTNSSGGDNEDLGVVPCR
NT seq
3411 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaaccctcagagaagtctgactttgagtcagtacggtgcacacac
tctggctctctgactcctttctcctctggagacatggatggcaacagttccagctggagt
gtgaactcccatgcctccgagatcttgagggccaaggctgcctgtacggctcccagcatt
ggagcagctgtgtacaccacagcacttccaactgagaagtgccaggagcaagtggggatg
acgtgtggtgatggaattgccgtaccacagaaggttctgtttccaccggagcgtctgaac
ctaaagtggaaccaggtccatcgtgttggcgcagggctccaaaatcttggcaacacatgt
tttcttaactctgccctacagtgtctttcatacactgcacccctatccaactatatgctg
accagagagcattccaaatcatgtcgtgagcctggattttgcatgatgtgtaccatgcag
aatcacatcacccaggtgtttgccaattcagggaatgtcataaagcccattggcgtgtta
aatgaactaaaacgtattgcaaagcattttcggtatgggagtcaggaggatgcccatgag
ttcttgagatacacagtagaggctatgcagaagtcttgtttgcctggaaacatactggac
aggcaaacgcaggcaaccactctggttcatcagatatttggaggctacctgaggtctaga
gtgaagtgtttaaattgcaaagctgtgtcggatacatttgatccttatctggacattgca
ctggacattaagacggctccaactattactaaagctcttgagcaatttgttaagcctgag
caactagatggggacaacgcctacaagtgcagcaaatgtatgaaaatggttcatgcctcc
aagagatttaccattcaccgcagctccaatgtgctgaccatctctctaaagcgctttgcc
aactttaatggagggaaaatagcaaaggatgtaagataccctgagtatttggacctgcgt
ccatacatgtctcagtctcaaggagagccactgctgtatgggctgtatgcagtgctggtt
catgctggttttagctgctatgccggacactactactgctatgtgaaggctagtaatggg
cagtggtatcagatgaatgattcatctgtgtctgtcagtgatattagatctgtgctaaac
caacaagcttacttgctgttctatagcaggtcagcagatctgaaaaatggggattttaac
cacgtgaatcgtaatacaggccagtcatcccctcggcctctaacaacacccaagacgaat
gggctccaatatacctctcagtcattcattggtccacagttaccccctcatcttgtaaag
aaatacgtcaatgggaacgtctcctctaaggagtatcagagtggctcaaagcccaacagc
aacaaccctagtggagtgaccaaaatcaactccactccctcttcctccttttcttcatgc
tcatcttccacttccaatcaacttgtgcgccccacatccatcccagagccacagaagagg
cccaagctgaccattcacatcggacagggaaaactggtgcgacccaaccagagccagtca
agctccggctgtcctttatcatcagcctcccaatctcgctcacagtccacaaactcttcc
tcaagcacttcgcagtctacctctgagagcccggcgcaggtcaatggaacacctgctaat
cacagtgctgctttcctggttccatatagccaggaatcttctgaggactctgacaaggat
gacggagtcttggacaatggtaccacaaagccttactcagttgccaaggcagcctgtaaa
aaagatggtacggatagaccctgttctgatagtttaagctccaagacaaatggctctcac
acctccgaggcttatacgtgtgaaaatggatcaggacacagtggccagaatggacatcaa
gtcaatggattcacacattctaaacagcttacagaaagtccaacctctgaatcttctctg
accagcgacactgacagttcagacagtcagctcagacagagcgtgtcaagctccaagttg
gatggcgttcttattccatcaccctccacagaaagagctaaaccggtgtgtaactctgac
actcagcctgccatacaggggtcagccaccagtacgcttgttaagccactgggcttgatg
gaccaaactagtacgcaggcagccttaccaaatgggtcaggtcaagtagggggcatgaca
gagtctcctccaaccagtcaaggtctcagccctcagaggagtgatggactcgcagtttta
aatgggccagaaagagcagcccaggttcttggtggtggaaataaaacgtctccatcagtc
aagcctaattcctgggatgaaaatgtaccaactgatgaccaagatcagctatcagatact
ttcacaaagggcaaaaacggagacaaggacagccatcgacattacagagagtgcagggac
aggagtaaagagcgttatggaggcagccatcggtctgacagagagtatcgtccacctaag
gagcgttcttcaagtcgggaaaaacgctaccgagaggttgatcggtaccgggacaggcat
gcttacaacagacgacactattactaccacaaacgagacagaggggagcggttgcacgat
tggcagcgagacaaagacaagaggtatcagaccagtaactacgacagtcaccgctattta
gaccatcattaccgggatggcggctcgagccattggcgccatgtgcaggaagatagacgt
gatagatggcactacaacagagagcagctttcatcttcacgctccaaaagcccgtcacct
tatcatggaacgagaaaacgcaggcactctgatgaagactcagcatctgaggagcgcaga
gcccgaaaaagtaaaaagtccaagaaaaagagcaaagaaaaacacagggagtacgagaag
gagatttctgatcgaagtggggacagcagctctcggcggcacaaaagtaaaaaaaagaag
aggaggaggagatatgattcagaggagaggaatcatacagacagtcattccacccacagc
tcagagaaacaagactcgaaaagcaggagtggtgaggagagagaaagccgtaagcatcgt
tgcagctctgacagagagcattctccaccccgagcgaagagagttaacactgaggaccat
caccaacctaatggtcactcagacagtggcataaatcattccaatgggagtgtttatgga
ttctgtcagaacggaatggatgaactggtgaaatacaaacacatgaatcatacctccact
aacagcagtggaggagacaatgaagacttgggcgtcgtgccgtgccgatga
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integrated database retrieval system
