Trichomycterus rosablanca: 134321455
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Entry
134321455 CDS
T09921
Symbol
vps35l
Name
(RefSeq) VPS35 endosomal protein-sorting factor-like
KO
K25731
VPS35 endosomal protein-sorting factor-like
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134321455 (vps35l)
Membrane trafficking [BR:
trn04131
]
Protein recycling
Others
Retriever complex
134321455 (vps35l)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps35
RNA_pol_Rpb4
Motif
Other DBs
NCBI-GeneID:
134321455
NCBI-ProteinID:
XP_062859282
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All DBs
Position
10:complement(34710095..34737688)
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AA seq
967 aa
AA seq
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MSSVQWHSRMRNYGTEMQSCRSTAIPVQNGDFHPLKPIMVTDSTTKSRRGGRKGSTSSSS
SSSSSVAPDPLSSMMEGTDPLSLFAAASAHESPALPHSSSSVELGRKHKENEEEVGSDFE
PWSAKRGEILARFTTTEKLSINLFMGSEKSKATSPSSAVSEKVRTRLEELDDLEEGSQRE
LLNLSQQDYVNRIEELNQSLKEAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLIT
DILDTFGRLVYERIWTMCSDPEPLPDFFSVEDVNDTAKETCLNWFFKIASIRELVPRLYV
EAAILKCNRFVSKNGIQETLPRLTAMVRGIGDPLVGVYARAYLCRVGMEVAPHLKDCLNK
NFFDLLASFRQIHSDSVQNQLVIQRVEIPVYLTLYSPAINWILQCVAYRAPDVLLTEMME
RCKKLGNNALLLNSVMLAFRAEFVAARATDFIGMIKDCDEAGFPKHLLFGSLGRSLACAD
PPESERLPILNEAWKVITKVRNPQDYNNCAEIWVEFTCRHFTKREVNTVLADIIKHMTPD
RAFEDAYPQLQSVMKKILNYFHNFSVLFSMEKFLPFMDMFQKDSVRVEVCKSIMEVFIKN
QQEPTRDPVILNALLHVCKTMHDSVNALTVEDEKRSLALLINGFIRMVSFGRDFEQQLSF
CVEARATFCNLEPVIIQLIHMVNQLAMETRRVMGGNHSRKTAAFVRACAAYSFISIPSLS
SIFNRLHLYLLSGQVALANHCLSQADSFLKAAIGILPEVPRMINVEGKLRPSEPFLLDFI
NNFLSTLLVVPDHPEQGVLYLVRGLLNMVQDYTWEDNSDAKVRVYISALPLLAAMSQESF
LYTVPKVDSNETLYGGDPKFVAEISRVCETLTGQVLDHLKTLGRDEGVRRQATLAFSLFS
SLLAHADLRNNKLNQLAVNLWNLSHKNGYCDTRTSVRTLDHIKHQAQQSQMAHLSEMLLR
LSLQSRA
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgtacagtggcactcacgtatgcgtaattatggcactgagatgcagagctgc
cgttcaacagccattccggttcagaacggcgacttccaccctctcaaacccatcatggtg
acggactccacgacgaagtccagacgtggaggacggaaaggcagcacatcttcatcctcc
tcctcctccagctccgtggcccctgaccctctcagctccatgatggagggaaccgacccc
ctgtcgctcttcgccgctgcatcagcccatgagtctcccgccctgcctcacagcagctct
tcggtggaactggggaggaaacataaggagaacgaggaagaagtgggttcagacttcgag
ccgtggtctgccaaacgtggtgagatcctggccaggttcaccaccacagagaagctctcc
ataaatctcttcatgggctcagaaaaaagcaaggccaccagccccagctctgcagtttcg
gagaaggttcgcacccgtctggaggagctggatgacctggaggaaggttctcagagggag
ctgctgaacctttcacagcaggactacgtgaaccgtatcgaggagctgaaccagtcactg
aaggaggcctgggcttcagaccagaaagtcaaagccctaaaaatcgtcatccagtgctcc
aaactgctttccgacacctctgtgatccagttctaccccagcaagttcgtcctcatcaca
gacatcctggacacattcggtcgtctggtttatgaaagaatctggaccatgtgctccgat
cctgaacctcttccagacttcttctcagtggaggacgtgaacgacacggctaaagagacg
tgcctcaactggttcttcaaaatcgcctccatcagagagctcgtccctcgtctatatgtg
gaagccgccatactgaagtgcaaccggtttgtgagcaagaatgggattcaggagactctg
ccccggctcacggcgatggttcgagggatcggggacccgctggtgggagtgtatgcccga
gcctacctgtgcagggtgggcatggaggtggctcctcacctgaaggactgtctgaacaag
aacttcttcgacctgctggcgtctttccggcagattcacagtgacagtgttcagaaccag
ctggtgatccagagggtggagatacccgtgtacctcacactctattctccagccatcaac
tggattctgcagtgtgtggcttacagagcacctgatgtgctgcttactgagatgatggag
aggtgtaaaaaactgggcaacaatgctctcctgctgaactctgtcatgttggccttccgg
gccgaattcgtggctgcaagagccaccgacttcattggaatgatcaaggactgtgatgaa
gctggatttcccaagcacctattatttggttctctgggccggagtttggcgtgtgccgac
cctccagagagcgagaggttgcccatcctcaacgaggcctggaaggtcatcactaaagtg
cgcaatccacaggattacaacaactgtgctgaaatctgggtggagtttacctgccgtcac
ttcaccaaacgagaggtgaacaccgtgctggctgacatcatcaagcacatgaccccggac
cgggcgttcgaggatgcttatccacagttgcagtcggtgatgaagaagatcctgaactat
tttcacaacttctctgtcctcttctctatggagaagttcctgcccttcatggacatgttc
cagaaagacagcgtgagagtggaggtctgtaagtccatcatggaggttttcatcaagaac
cagcaggaaccgactcgagatcccgtcatcctcaacgctctgctacacgtctgcaagacc
atgcatgattctgtgaatgctcttacggtggaggatgagaaaagatctctagctctgctg
atcaacggcttcattcgaatggtctcgtttggacgtgactttgagcagcagttgagtttc
tgcgtggaggccagagcgacattctgcaacctagagcccgtcatcattcagctcattcac
atggtgaaccagttggccatggagaccagacgagtgatgggtgggaatcactcccgcaaa
acagccgcgtttgttcgggcgtgcgcggcctacagcttcatcagcatcccgtcgctcagc
agcatcttcaaccgccttcacctgtacttactctcaggacaggtggcgctggctaatcac
tgcctctctcaggccgactccttcctgaaggcggccatcggtattttgcccgaagttccg
cgcatgattaacgtggaggggaaactgcgtccctctgagcccttcctgctggacttcatc
aacaacttcctgtccacgctgctggtggtgccggaccacccggagcagggggtgttgtat
ttggtgcgagggttgttgaacatggtgcaggactacacgtgggaggacaacagtgacgcc
aaagtgcgagtgtacatcagcgccctgccactgttggctgctatgagccaggagagcttc
ctctacaccgttcctaaagtggactctaacgagacgctgtacggtggagaccccaaattt
gtggcggagatcagccgagtgtgtgagactctgactggtcaagtgctggaccacctaaag
actctgggccgagacgagggagtacgcaggcaggctacgctggcgttctctctctttagc
agtttgctagcccacgcagatctacgcaacaacaaactcaaccagcttgctgtcaacctg
tggaacctcagccataaaaacggctactgtgatacacggacctcggtgcgcactctggat
cacattaagcatcaggctcagcagtcccaaatggctcacctctccgaaatgttgctgcgc
ctctctctgcagtcacgagcctga
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