Trichomycterus rosablanca: 134321517
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Entry
134321517 CDS
T09921
Symbol
drosha
Name
(RefSeq) ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
trn
Trichomycterus rosablanca
Pathway
trn03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
134321517 (drosha)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
trn03019
]
134321517 (drosha)
03009 Ribosome biogenesis [BR:
trn03009
]
134321517 (drosha)
03036 Chromosome and associated proteins [BR:
trn03036
]
134321517 (drosha)
Enzymes [BR:
trn01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
134321517 (drosha)
Messenger RNA biogenesis [BR:
trn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
134321517 (drosha)
Ribosome biogenesis [BR:
trn03009
]
Eukaryotic type
90S particles
RNase
134321517 (drosha)
Prokaryotic type
rRNA processing factors
134321517 (drosha)
Chromosome and associated proteins [BR:
trn03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
134321517 (drosha)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helical_CED_Drosha
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_MRPL44
Cro
YcaO
Motif
Other DBs
NCBI-GeneID:
134321517
NCBI-ProteinID:
XP_062859378
LinkDB
All DBs
Position
10:37845104..37923212
Genome browser
AA seq
1293 aa
AA seq
DB search
MSFHPGRGCPRGRPPSQNFPPVSMHLPPPQHLAPSVPPPHPYDSSALHRSAYNPQNTYMS
NVPPRLDFPPYPVPPPSQGPQCPLRPPYPPLPMRHGFPEPPNFPPPPLPGPAGGFASSQG
CYPYIPPPPPPPTMPPSVPFQPPYSMNYPPQQHVPPPPLSFYPPSEAGSFKAMEHFHHFK
GDKSPDRSRRHKGYGYGGYGGQSDRRERGRSLDRRRQEGGRYRSDSERGRTPPRHRSRER
SRERYRHRDSRSSPPSDRHRKRPRSRSPSRERKRGRTEEDRDRERDRDRERERERDKDRR
TDGPGGSRERANRETEDEEKEEEEEFLKPAWIRCTHAENYYSNDPMDQVGDSTVVGTSKL
RVLYERFEEELGRRQERARSSKPKWEPPKTKLDLDHDESSSDSDCDSDGDSSCSSSSDSD
LFDVIAEIKRKKAHPDRLHEELWYNDPGQMNDGPLCKCSAKARRTGIRHSIYPGEELVKT
CRPMTNNAGKLFHYRITVSPPTNFLTDRPTVIEYDDHEYLFEGFSLFSHTPLTNIPLCRV
IRFNIDYIIHFIEEVGPENYCVKGLELFSSYVFQDILELYDWNLTGPEENEPQGCQKFHF
MPRFVRFLPDGGKEVLSMHQVLLYLLRSNKALVPEEEIADMLQWEELEWQKYAEECKGMI
VTNPGMKPSSVRIDQLDREQFNPNVITFPIIVHFGIRPAQLSYAGDPQYQKLWKSYVKLR
HLLANSPKVKQIEKQKLTQREDSLQKIRQKNTMRREVTVELSSQGFWKTGIRSDVCQHAM
MLPVLTHHIRYHQCLMHLDRLIGYVFTDRSLLQLAMTHPSHHLNFGMNPDHARNSLSNCG
IRQPKYGDRKVHHMYMRKKGINTLINIMSRLGQDDPSPSRINHNERLEFLGDAVVEFLTS
VHLYYLFPSLEEGGLATYRTAIVQNQHLAMLAKKLELDRFMLYAHGPDLCRESDLRHAMA
NCFEALIGAVYLEGGLEEAKELFGRLLFNTENLKEVWLNYPPHPLQVQEPLTDRQLIETS
PVLQKLTDFETAIGVLFTHVRLLARAFTLRTVGFNHLTLGHNQRMEFLGDSIMQLVATEY
LFIHFPDHHEGHLTLLRSSLVNNRTQAKVAEELGMQEFAITNDKTKRPVALRTKTLADLL
ESFIAALYIDKDLEYVHTFMNVCFFPRLKEFILNQDWNDPKSQLQQCCLTLRTEGKEPDI
PLYKTLQTVGPSHARTYTVAVYFKGERIGCGKGPSIQQAEMGAAMDALEKYNFPQMAHQK
RFIERKYRQELKEMRRERERQERESDDTDDGRK
NT seq
3882 nt
NT seq
+upstream
nt +downstream
nt
atgtcctttcatccggggcgtggatgtccccgcggacgccctccctctcaaaatttcccc
cctgtttccatgcatttgccccctcctcagcatcttgccccctctgtcccccctccgcac
ccttacgactcctcggcgctccatcgttccgcctacaaccctcagaacacctacatgtct
aacgtcccgcctcgtctcgacttcccaccctaccccgttcctccgccctcccagggccca
cagtgccccctgcgccctccttacccaccccttccgatgcgccacggcttcccagaaccg
ccgaactttcccccgccgcctctgcccggccctgccggcggcttcgcgtcctctcagggc
tgttatccttacatcccacctccccctcctccacccacgatgccaccttcggtgcccttt
cagcccccttactccatgaattacccccctcagcagcatgttccaccccctccactgagt
ttctacccaccctcggaagccggctccttcaaagccatggagcattttcatcatttcaag
ggcgacaaatcgccggaccggtcgcggcgtcacaagggctacgggtacggcgggtacggc
gggcagagtgatcgcagggagcgagggaggagtctggacagaaggaggcaggagggagga
aggtacaggtcggacagcgagagaggcaggactccgcccaggcatcggagccgcgagcgc
agcagggagcggtaccgacaccgggacagccggagctctcctccgtcagaccggcacagg
aaacgtccgcgcagccgctcgccgagccgagagagaaagcgtggacggaccgaggaggac
cgagacagggaaagagaccgggaccgagagagagagagggaacgggacaaggacaggagg
acggatggaccgggtggaagtagagagagagcgaacagagagacggaggatgaggagaag
gaggaggaggaagagtttctgaagccggcgtggatccgctgcactcacgccgaaaactac
tactccaacgaccccatggaccaagtgggagactctacggtagtgggcaccagtaaactc
agggtcctgtatgagcgtttcgaggaagagctgggccggcgtcaggaacgagccaggtcc
tccaaaccgaagtgggagccacccaaaaccaaactggacctggatcatgacgagagctcg
agtgattcggactgtgactcggacggagacagcagttgctccagcagctccgactccgac
ttgtttgacgtgatcgccgaaatcaagaggaagaaggcgcaccccgaccggctccacgag
gagctctggtacaacgatcccggacagatgaacgacggtccgttgtgtaagtgcagcgcc
aaagccaggcgcacaggaatccggcacagtatttaccccggggaagagctggtgaagacg
tgccgtcccatgaccaacaacgccggcaaactcttccattacagaatcacagtgtctccg
cccaccaacttcctgactgaccggccgacggtgatcgagtacgacgaccacgagtacctg
tttgagggcttctctctcttctcacacacccctcttactaacatcccgttgtgcagggtg
atccggttcaacatcgattacatcatccactttatagaggaggtgggacctgagaattac
tgtgtgaaaggactggagcttttctcttcgtatgtgttccaagacatactggaactgtac
gactggaacctcacaggtccagaagaaaacgagccacaggggtgccagaagttccacttc
atgcctcgttttgtccgattcctaccagacggaggtaaggaggttttatcgatgcaccag
gtgctgctgtatctcttacgcagtaataaagccctggttcctgaagaagaaatcgccgac
atgctgcagtgggaggaactggagtggcagaaatacgctgaggagtgtaaaggaatgatc
gtcaccaatcctggcatgaagcccagctcggtgaggatcgaccagctggaccgagagcag
ttcaacccaaacgtcatcaccttccccatcatcgtccacttcggaatccgtcctgctcag
ctcagctacgccggggaccctcagtatcagaagctgtggaagagctacgtgaaactgcgc
cacctgttggccaacagtccgaaggtgaaacagatcgaaaagcagaagctgacacaaaga
gaggactctctgcagaagatcaggcagaagaacaccatgaggagagaagtgaccgtggaa
ctgagcagccaggggttctggaaaaccggaatacgctccgacgtctgccagcatgccatg
atgctcccggttctgacccaccacatccggtaccaccagtgtctgatgcacctggacaga
ctgatcggctacgttttcacggaccgctccctcctgcagttggccatgacccacccgagt
catcacctgaacttcgggatgaaccccgaccacgcccgtaactctctgtccaactgtgga
atccgccagcctaaatacggcgaccgcaaggtccaccacatgtacatgaggaaaaaggga
ataaacacgctgataaacatcatgtcacgactcggccaggacgatccctcaccatccagg
attaatcataacgagcgtctggagtttctcggtgacgccgtggttgaatttctcaccagt
gttcatctctactatctgtttcccagtctggaggaaggtggattggccacgtatcgcacc
gctatcgttcagaatcagcatctggccatgctggctaagaagctggagctggatcgcttc
atgctgtacgctcacgggcccgatctgtgtcgagaatcggacctccgacacgccatggcg
aactgcttcgaagctctgattggcgcggtgtatttggaggggggattagaagaggccaag
gaacttttcggaaggttactgttcaacactgagaatctgaaggaagtttggctcaactac
ccgcctcatccactacaggtgcaggagccgctgactgaccggcagctgatcgaaacctcg
ccggtcctgcagaaactcaccgatttcgagacggccatcggcgtcctattcacccacgtg
cgtctcctggcccgggcgttcaccctgcggaccgtcggcttcaaccacctcacgctaggt
cacaatcagaggatggagtttctgggagattctataatgcagctcgtagccaccgagtac
ctgttcatccacttccctgaccaccacgagggtcatctgacgctgttgcgaagctcgttg
gtaaataaccgaacccaggcgaaggtggcggaggaactggggatgcaggaattcgccata
acgaacgacaagaccaaacgacccgtcgctctgcggacgaaaacactagccgacctgctg
gagtcttttattgcagcactttacatcgacaaagacctggaatacgtccacacgttcatg
aacgtctgcttctttccaagactaaaggagtttattctgaatcaggactggaatgatcct
aaatctcagcttcagcagtgctgcctcaccctgcgcacagagggcaaagaacccgacatc
cccctctacaagactctgcagacggtcggaccgtctcacgctcgtacctacaccgtcgct
gtgtattttaaaggagagagaatcgggtgtggaaaaggaccgagtatccagcaggctgag
atgggagcagcgatggacgctctggagaaatataatttccctcagatggcgcatcagaag
cgcttcatcgagaggaagtatcggcaggagctgaaggagatgaggagggagagagagcga
caggagcgagagagcgacgacaccgacgacgggcgcaaatag
DBGET
integrated database retrieval system
