Trichomycterus rosablanca: 134321549
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Entry
134321549 CDS
T09921
Symbol
myof
Name
(RefSeq) myoferlin
KO
K22125
myoferlin
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134321549 (myof)
Membrane trafficking [BR:
trn04131
]
Endosome - Lysosome transport
Others
Ferlins
134321549 (myof)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C2
dsrm_Ferlin
FerB
Ferlin_C
FerI
FerA
COG6_N
Motif
Other DBs
NCBI-GeneID:
134321549
NCBI-ProteinID:
XP_062859429
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All DBs
Position
10:complement(40214253..40271224)
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AA seq
2059 aa
AA seq
DB search
MLRVAVESAAGLPKKKLGNPDPITSIVFKGETKKTRSVSSEVNPVWKETLVFDLKGSPLD
SSSFIDVIVKDFETLGKDKFLGSAKVYLTDLASNQVKSLPSKNLALVNESGQNIGATIDL
VISYEPPASAVPNPNDQPDGGVAGNAGGDDAADTGGAPSSAQPNQRLQLRTRTQHRPLSN
KPQDFQIRVRVIEGRQLPGNNIKPVVKVHVCGETHRTRIKKGNNPYYDEMFFYNLNMLPS
DLFDQHVSIRVYNSSSLRADSLMGEFKVDVGFIYDEPAHSIMRKWLLLNDPDDTSCGAKG
YLKVSMFIIGTGDHPPVEMRERSADDDDVENNLLLPAGVALRWVTLQLKVFRAEDVPQMD
DSIAQSLKEAFGGQSNKKNLVDPFVEAWFAGKKLCTRIIEKNSNPEWNQVLNLQVKFPSM
CERIRLTVFDWDRLTRNDAIGTTYLNLTAIASSGGESEDQDPEKEYRGKEVYLENAGETQ
TGFLPAFGPSYINLYGSPREFTGFPDPYEDLNFGKGEGVAYRGRVLIELSTKLEGKAEKE
VEEILNDDILVTQKYQRRRKYCLSAVFHSATMIQEPGEPIQFEVSIGNYGNKLDSTCVPL
ASTTQYSCAVFDGNCYYYLPWANTKPVVAIMSYWEDISHRLDAVNIILYIAHRLKENISE
LKNAVQAKLSDTKLYEIWNKLITQLMDDLNSFKLPDLVGTSNLTALDIQIKKLRDNVLKN
ILSSADCVLHESRDVRESLSTIDSWLDKLLQLAEEPQNSMPDVIIWMLRGEKRVAYCRVP
ALHVLYSAYSEQACGQFCGKTQTVFLKYPMDKNKGSKVPAQIQINMWLGLAAHEKKFNAF
AEGTFNVFAELYENQAKMLGKWGTAGLLNRSKFSDVTGKVKLKQEYFMPSTGWQWEGEWF
VDPEQSLLTEADAGHTEFLEEVYENQTRYPGGEWAPAAEPYTDVNGEKALRPDDIECPPG
WKWMDEWMFDDKRAVDERGWEYGVTIPPDDKPKSWVAAEKMYHVHRRRRKIRWRKKVAGA
GAAAKLKDVVDLEGWEFSSLVGWKFHKNERSSDSFRRRRWRKKMAPSDRIGASAIFKLEG
GLGIDVEQKGEKESKSEATNLLGANTPNVSCSFDRSCEYHLRVYVYQARNLLALDKDSFS
DPYVHVSFLHMSQTTETIKSTLNPTWDQTLIFNSVEIVGDPQSLALNPPQVMLEIFDSDQ
VGKDEPLGRSICVPLVKLIPDVDASPKLIWCPVVHKETPAGQILVSAELILKNKGGETDL
PLVPPKKRDVLYMVPQGIRPVVQLTAIEVLAWGLRNMKTYQLAPVSSPSLVVECGGERIQ
SAVIKNMKRSPNFPGNVLVMKVLLPKDEMYTPPIVLKVIDHRPFGRKPVVGQCTIDTLEE
FRCNPYDTVAEVAMSSKVALMAAAPQELHINIEERPLLETQFLHGISAAVDKMAPSVPLR
QEKEKETIDWWSKFYASVGDHEKCGPYLQKGYDTLKVFDGELESVSEYKGLTDFCNTFKL
CRGRSDDGEDDPSVVGEFKGSFKIYPLSDDPSVRPPPQQFRELPDSGPQECLVRIYVVRA
IDLQPKDNNGLCDPYIKIALGKKSIDDRDNYIPNTTSPVFGRMFEMSCFLPQDKDLKISV
YDFDLLARDEKVGETVIDLENRFLSRFGSYCGVPQTYCTSGPNQWRDQLKPSQILQNHAR
LKGVSAPRTEDNGNTLSFNGQEYQLSDFEANKEIHQHLGPPNERIALHVLRTQGLVPEHV
ETRTLYSSFQPTLSQGTLQMWVDVFPKTLGLPGAPFDISPRKAKKFSLRVIVWNTTNVIL
DETSITGEHMSDIYVKGWMAGKEEDKQKTDVHYRSLDGDGNFNWRFIFNFDYLPAEQLCL
VSKKEHFWSLDKTEFRIPPQLIIQIWDNDKFSLDDYLGTVELNLHHLISPAKTPEKCRLT
MLDNINKPVQKFDQSKSLFAQKSVRGWWPCYIEKNGKKELGGKVEITLEIVNEKEEDERP
AGKGRDEPNMNPKLNPPNRPETSFFWFTNPCKTMKFIVWRRFKWIFIGMLLLILVLLFFG
ILLYSLPNYISMKIVKPLR
NT seq
6180 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgtgtcgcggtggaatctgcggcgggtcttcccaaaaagaagctcggtaacccg
gaccccatcacatccatcgtctttaaaggtgaaacaaagaaaacccgctcagtcagcagt
gaagttaatccagtctggaaggagacccttgtatttgatttgaaaggttctccacttgat
tcttcttccttcattgatgttatcgtaaaagactttgagacccttggaaaagacaagttt
ctcggctcagctaaagtttatctaacagatctagcgagcaatcaagtgaagtcgctcccc
tcaaaaaatctggctttggtgaatgaaagtgggcagaatattggtgccacgatcgatctg
gtaataagttatgaaccaccagccagtgccgttcccaacccaaacgatcagccggacggc
ggtgtggcaggaaatgcaggtggagatgatgcggctgatacaggcggcgcaccgtcgtct
gctcaaccaaaccaaagacttcagctcaggactagaactcagcacagacctttatccaac
aaaccacaggacttccagatccgggttcgagtgattgagggtcgtcagttgcctggaaac
aacataaagcccgttgtgaaagttcatgtttgtggtgaaactcacagaactcgcatcaag
aaaggaaataacccgtactacgacgagatgttcttttacaacctcaacatgttgccgtca
gacctcttcgatcaacacgtcagcatacgggtgtataactcctcatcactcagagccgac
agtttgatgggagaatttaaggtggatgttggttttatctacgatgaaccggctcacagc
atcatgagaaaatggctgctgttaaacgatcctgacgacaccagctgtggagcgaaaggc
tacctgaaagttagcatgttcatcatcgggacaggagatcatcctccggtggagatgagg
gaacggagcgctgatgatgatgatgtggagaataacctgctgctgccggctggagtcgcc
ctccgatgggtcacactgcagctcaaagtgtttcgtgctgaagacgtcccacaaatggac
gactccatcgctcagtccttaaaggaagcgttcggggggcaaagcaataagaagaatctt
gtggatccgtttgttgaggcttggtttgctggaaagaagctctgcaccagaataatagag
aagaattcgaaccctgagtggaaccaggttctgaacctgcaggtgaagtttccatccatg
tgtgaacggatcagactgacggtgttcgactgggacagactgaccaggaatgacgccatc
ggcaccacatacctaaatctgactgcaatagcgtcatctggtggtgaatctgaagatcag
gatccagagaaagagtatcgaggaaaggaagtgtatttagaaaacgccggcgagactcag
actggttttctacctgcatttggtccaagttacattaatctatacggcagccccagagag
ttcacgggttttcctgacccttatgaagacctgaactttggaaagggagaaggggtggca
tacaggggtcgagttctcattgaactttccaccaaacttgagggaaaggcggagaaggaa
gtggaggaaatactgaatgacgacatcctggttactcagaaataccagcgaaggaggaag
tactgcctgagtgcggtgttccacagcgccaccatgatacaggagccgggagaacccatt
cagtttgaagttagtatcggaaattatggcaataaactggactcaacatgcgtcccgtta
gcttcaaccacccagtacagctgtgccgtgtttgacgggaattgttattactacctgccc
tgggcgaacaccaaacctgtcgtggccatcatgtcgtactgggaggacatcagtcatcgc
ctagatgctgtgaacatcattctgtacatcgcacaccgtctgaaagaaaacatcagcgag
ctgaagaacgcggtgcaggccaaactgtcagatacaaaactctacgagatctggaacaag
cttatcacccagctgatggacgatctcaacagttttaaactcccggacctggtgggaacg
tctaatcttacagctctggacatccagattaagaagctgcgtgataatgtgctgaagaac
atcctgagttcagccgactgcgtgttacatgagagtcgtgacgttagagagagtctgagc
accatcgacagctggctggacaaactcctacaactggctgaagagccccagaacagcatg
ccagatgtgatcatctggatgttgagaggagaaaagagggtggcgtactgtcgcgtccca
gctcttcatgtgctgtactcagcgtacagtgagcaggcgtgtggtcagttctgtggaaaa
acacagaccgtcttcctgaagtaccccatggataaaaacaagggttccaaggttcctgcc
caaatacagataaatatgtggctcggattagcggcgcatgagaagaagtttaacgctttt
gctgaaggaacgttcaacgtttttgctgagctgtatgaaaaccaggcgaagatgttgggg
aagtggggcacggcgggtctgctgaaccgcagtaagttctctgacgtgacgggtaaagtg
aagctgaagcaggagtatttcatgccctctacaggctggcagtgggagggcgagtggttc
gtcgatccagagcagagtttgctgacagaggcggatgctggacacaccgagttcctggag
gaggtttatgaaaatcagactcgctaccctggaggagagtgggcgccggccgcagaacct
tatacagatgtgaatggagagaaagctcttcgtcccgatgatatagaatgccctcctgga
tggaaatggatggacgagtggatgtttgatgataaacgggcggtggatgagagggggtgg
gagtacggagttacgattcctcctgatgataaaccgaagtcctgggtggcggctgaaaag
atgtaccacgtccatcgtcgtagaaggaagattcgatggcgtaaaaaggtggcgggtgca
ggcgctgccgctaagctgaaagatgtcgtggacctggagggatgggagttctcttctctc
gttggctggaagttccataaaaacgagcgctcctctgattcgttccgccgacgccgctgg
cgaaagaaaatggctccgtctgatcgcatcggtgcttcagctatcttcaaactggagggg
ggactggggattgatgtggaacaaaagggagaaaaagaatcaaaatcagaggccacaaac
ttactgggagccaatactcccaacgtgtcgtgttcattcgaccgatcgtgtgagtaccac
ctccgggtttacgtttatcaggccagaaacctgctcgccctggacaaagatagtttctca
gatccatacgtgcacgtttcatttctacacatgagccagaccacagaaaccatcaagtcc
acactgaaccccacctgggatcaaaccctcatcttcaacagtgtggaaatcgtcggtgac
ccccagtctctcgccctcaacccacctcaagtcatgctggagatctttgacagtgaccaa
gtgggtaaagacgagcccctcggcaggagtatctgtgtgccgctagtaaaactgatacca
gacgtagacgcgtcacctaaactgatctggtgtccagtggtgcacaaggaaacgcccgcc
ggacagatcctggtctctgcagagctcattctgaagaacaagggaggtgagacggatctt
cctctggtcccccccaaaaaaagagacgtgctgtacatggtgcctcagggtattcggccg
gtggtgcagctgactgctatcgaggtactggcgtggggtttgcgtaacatgaagacgtac
cagttggcaccggtgtcctcgcccagcctggtggtggagtgtggaggtgagaggattcag
tcagccgtcatcaagaacatgaagaggagcccaaacttccctggaaatgttctagtaatg
aaagtgctcctgcctaaagacgagatgtacacgcctccgatagtgctgaaggtgattgat
cacagaccgtttggcaggaagcctgtagttggccagtgcaccattgacacactggaggag
ttccgatgcaacccgtacgacaccgtcgctgaagtggccatgtcatctaaagtggctctg
atggcggcggctcctcaggagcttcacataaacatagaggaacgtcctctactagagacg
cagtttttacacggcatctcagcagctgtagacaaaatggctccatcagttcctctgcgt
caagaaaaggagaaggagacgatcgattggtggagcaagttttacgcttctgttggagat
catgagaaatgtgggccgtaccttcagaaaggatacgacaccctgaaggtgtttgatgga
gaacttgagagcgtttctgagtataaaggactgactgatttctgtaacacatttaaactc
tgtcggggcagaagtgacgacggtgaggacgacccgagtgtagtcggagaattcaagggt
tcctttaagatctatcctctatcagatgaccccagcgtgcgaccacctccacagcagttc
cgagagcttcctgacagcggcccgcaggagtgcctggtcaggatctacgtggtcagagcg
attgacctgcagcccaaagacaacaacggtttatgtgacccctatataaagatcgctttg
ggaaagaagagcattgatgacagagacaattacattccaaataccaccagtccggtgttt
ggaagaatgtttgagatgtcgtgtttcctccctcaagataaagatctgaagatctccgtg
tatgactttgatcttctggctcgggatgagaaagtgggcgagacggttattgatctggag
aatcgtttcctttcacgtttcggctcgtactgcggcgtccctcagacctactgcacatcc
ggtccaaaccagtggcgggatcagctgaagccctcccagattttacagaaccacgcccgt
ctgaaaggagtttcagctccgagaaccgaggacaacgggaacaccctgagcttcaacggc
caggagtatcaactctccgactttgaggctaacaaggaaatccaccagcacctgggaccc
ccgaatgaacgaatcgctttacatgttctccgaacacaaggactcgtacccgagcacgta
gaaaccagaacgctctacagcagcttccagcccacgctgtctcagggaactcttcagatg
tgggttgatgttttccccaaaactcttggacttcctggtgctccgtttgatatttctcca
cgcaaagctaaaaaattttcattacgcgtgattgtttggaacacgactaacgtcatcctg
gatgagacaagcatcaccggggagcacatgagtgatatttatgtgaagggctggatggca
ggaaaggaggaagataaacagaagactgacgtccattacagatctctggatggtgatgga
aactttaactggagatttatctttaattttgattacctgccggcagaacaactctgttta
gtttctaaaaaggaacatttctggagtctggataaaacggagttcagaattccacctcag
ctgatcatccagatttgggacaatgataaattttctctggacgattacctgggaaccgtg
gagctgaacctgcaccatctcatctcacctgcaaaaactccagagaagtgtagactcacc
atgctggacaacatcaacaaaccagttcagaagttcgaccagtccaagtccctgttcgct
cagaagtcggttcggggatggtggccctgttacatcgagaagaacgggaagaaggagctg
ggtgggaaagtggaaattacgctggagatcgtgaatgagaaggaagaagatgagagacca
gcaggaaaaggtcgagatgaacccaacatgaacccaaaactcaacccacccaaccgaccg
gaaacgtcgttcttctggttcaccaacccgtgtaagaccatgaagttcatcgtgtggagg
agattcaagtggatctttatcggaatgttgttgttgatactggtgctgctgttttttgga
atcctcctgtattcattaccaaattacatatcgatgaaaattgtgaagcctcttcgatga
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integrated database retrieval system
