Trichomycterus rosablanca: 134321674
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Entry
134321674 CDS
T09921
Symbol
arid5b
Name
(RefSeq) AT-rich interactive domain-containing protein 5B
KO
K25857
AT-rich interactive domain-containing protein 5
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
trn03000
]
134321674 (arid5b)
Transcription factors [BR:
trn03000
]
Eukaryotic type
Helix-turn-helix
ARID
134321674 (arid5b)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ARID
Motif
Other DBs
NCBI-GeneID:
134321674
NCBI-ProteinID:
XP_062859546
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All DBs
Position
10:1290900..1349005
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AA seq
1129 aa
AA seq
DB search
MEPNNSLTWVGSPCGLHGPYIFYKAFRFKIESQSRILSLGDFFLVRCKPEEPLCIAELQL
LWEERTSKQLLSSSKLYFLPEDTPQGRNVTHGEDEVIAVSEKIIVKLEDLAKWTVWDATC
WTKGLHALPLKPSTLKELGRNGQREGLYRYRESTLNSGLNFKDVLREKAELGDDGDDKKV
LVLSYPQYCRYRSIIARLRARPASLLTDQVVLALGGIATLTADTQILYCRDTFEHPTLLE
NDSICDEFAPNLKGRPRKKRLSVCQRRDSQSQSGGAKEPSNVEPKAPSKVKTETKAVMPK
PKSGGCKKAPAEEKPGEETGEECRAEEQSFLVALYKYMKERKTPIERIPYLGFKQINLWT
MFQAAQKLGGYELITARRQWKNVYDELGGNPGSTSAATCTRRHYERLILPYERYTKGEED
KPLPPAKARKQEAGAQEAGTKTKVLSIKRPKDEQNTKSRNEKDASSAKVSEPGAENFDDE
QELQDEEPVEALQSPISDQTECQTESPSMDDDDVQLIVKEEDEKPLRKSSWDSDDHESLN
HAPLPQDSVPLKSEDSEVFPIAASVPLRPQTGKTEQAEINESQNHVNMVIPNPTERAEIS
TKDESLSYNNSVLYPRGNPGIMSPLAKKKMLSQVSGASLNNNYPFGPPPPLVNKNASGGA
TEEATAEQQCPQIPSSRSEANVVIKRPSVIQHAQSFKSRSSDDRRASMEASHREICAERD
FYPSEAPQRQPLHQTQPAVRTNHHFNVEKSTDMPCPGQVPSYLSDFYSSQHLHNLYRQDQ
LSKYLSRDGYSWDSESAKGFPQSQHSDRESLTYSSCLNRKEGSPSERSPDEQPTDLSLPK
SSPHKLPLSGSSLPGPSHSMMQQDLKSAPVFQSSGGQRSSPDFHPRACRVPPMSVSAPKK
VLEHHHKAHSGRGDGTAGYKLDEMTSRPILSAKSSPQNVGAARPLKRNLEELENRPTEKK
IRAVTPMHCSTPRDASVKARIPEPDNESVKLAELAHAVHINGYSAEGHKFPMHSSIFPGL
YPGAFVSQVQDMCDSLGPHAPRGYSHPLQYLKNQAVISPLMPPFAIHSIMMQRQLLAQAA
NPAHLYRHPVGTSYGDILHHGLYPITALNPQPAFSPSQLSSVHPSTKLS
NT seq
3390 nt
NT seq
+upstream
nt +downstream
nt
atggagcccaacaactcactgacgtgggtcggctcaccttgcggcttgcacggaccctac
attttctacaaggcttttcgcttcaagatcgaatcccaaagcaggattttatcgctggga
gattttttcttggttcgctgtaaacccgaggagccgctgtgcatcgccgagctgcagctc
ttgtgggaggaaaggaccagcaagcaacttttaagcagctccaaactttattttctaccc
gaggacactccacagggaaggaatgtcactcacggagaggacgaggtgatcgccgtctca
gagaagatcatcgtgaagctagaagacctggcgaaatggaccgtgtgggacgccacctgc
tggacgaagggcctccacgcgctacctctgaagccctcgacgctcaaggaactgggcaga
aacggccagcgggaaggactgtaccgctacagggagtccacgctcaacagcggcctcaac
ttcaaagacgtgctgagggagaaggccgaactgggcgacgatggcgacgataagaaggtc
ctggtgctcagctatccacagtactgtcgctaccgctccatcatcgcacggctccgcgcg
cggcccgcctccctgctgaccgaccaggtggtgctggcgctagggggcatcgccacgctc
accgccgacacccagatcctctactgcagggacacgttcgagcaccccacgctgctggag
aacgacagcatctgcgacgaattcgcacccaacctgaagggccggccccgcaagaagaga
ctctccgtgtgccagcgcagggactcacagagccagagcggaggtgccaaggagcccagt
aatgtggagcccaaagcgcccagcaaggttaaaaccgagaccaaggcggtcatgcccaaa
cccaagagcggcggctgtaagaaagcgccggcggaggagaagccgggcgaggagacgggc
gaggagtgtcgcgctgaggagcagagctttctggtggctctctacaagtacatgaaagag
aggaagacgcccatcgagcgaataccgtacctcggcttcaaacagataaatctgtggacg
atgtttcaggcggctcagaagctgggaggatacgagctgatcacggctcgccgacagtgg
aaaaatgtttacgacgagctgggtggaaacccgggaagcaccagcgctgccacgtgtacg
aggagacactacgagagactaatcctgccctacgagagatacacaaaaggagaggaggac
aagcccctaccccctgccaaggcccgaaagcaagaggccggcgcccaggaagcgggcacc
aagacaaaagtgctttccatcaagcggcccaaagacgagcaaaacacgaagagccggaat
gaaaaggacgcctcgtcggctaaagtctcggaaccgggtgcggagaacttcgatgacgag
caagagctccaggacgaagagccagtagaagctctgcagtctccgatctctgaccagacg
gaatgtcagacagaaagtccaagcatggatgatgacgacgtgcagctgattgtcaaggag
gaagatgagaaacctcttcgaaagtcctcatgggacagcgatgaccacgaatcgctcaat
catgcgcccctaccgcaggacagcgtgccgctcaaatccgaagactctgaggtttttccg
attgctgcgtctgtgccactacgaccccagacggggaagaccgaacaggctgaaataaac
gagagccagaaccatgtaaacatggtaatacctaatccgactgagagggccgaaatctcc
accaaggacgagagtttgagctacaacaactcggttctgtatccccggggtaaccctggc
atcatgtcccctctcgctaaaaagaagatgctgtcccaggtcagcggtgccagtctgaac
aataattacccctttggtccacctcccccgttggtcaacaaaaacgcatccggcggcgct
accgaggaagcaacggctgagcaacagtgcccccaaatcccttccagcagaagcgaagcg
aacgtcgtgatcaagcgtccatctgtcatccagcacgcccagagcttcaagtctcgaagc
agcgatgaccgaagagcctccatggaagcctctcatagagagatttgtgctgagagggat
ttctacccctcagaagccccccagcgccaacccctacaccagacacagcccgctgtcaga
accaatcaccatttcaacgtggagaaatccacagacatgccttgtcctggtcaggtgccc
agttacctaagtgatttctactcctcacaacacttacataacctctaccggcaagaccag
ctgagcaagtacctgagccgggacgggtactcatgggactctgagagcgccaagggtttc
ccacagagtcaacattcggacagggaaagcctgacctactcctcctgtctaaatcgtaaa
gaaggctcccctagcgaaagatcaccggatgagcaaccgacagatctcagcctcccgaaa
tcctccccgcacaaactgcccctctccgggtcttcactgcccggcccgtcacattccatg
atgcagcaagaccttaaaagcgctccggtctttcaatcaagcggcggtcagcgttcgagc
ccggactttcaccccagagcctgtcgggttcctcccatgagcgtatccgctcccaaaaag
gtgctggaacaccaccataaggcgcacagtggccgcggagacgggacggccggctacaag
ttagacgagatgacttctcggccgatcctgagcgccaagagcagcccgcagaacgttggc
gcggcacgaccgctgaagagaaacctggaggagctggagaacagacccaccgagaagaag
atccgggccgtcacacccatgcactgctcgacgcccagagacgcgtccgtaaaggcacgg
atccccgagcccgacaacgagtcggtgaagctggccgagctggcacacgcggtgcacatc
aacggctactccgccgagggacacaagttccccatgcactcctccatcttcccagggctg
tatcctggggccttcgtatctcaggttcaggacatgtgtgacagcctgggccctcacgcc
ccccgcggctattcgcatccgctacagtacttgaagaaccaggctgtcatttcgccactc
atgccccccttcgccatccattccataatgatgcagagacagttactggcccaggcggcc
aaccccgcccacttatacaggcaccctgtggggacttcgtacggagacattctccatcat
ggactttaccccataacggctctcaacccccagccagcttttagtccctcgcagctatcc
tcagttcatcccagcactaaactgtcctag
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