Trichomycterus rosablanca: 134321845
Help
Entry
134321845 CDS
T09921
Symbol
lingo1a
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
trn
Trichomycterus rosablanca
Brite
KEGG Orthology (KO) [BR:
trn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
trn04131
]
134321845 (lingo1a)
Membrane trafficking [BR:
trn04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
134321845 (lingo1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
LRR_4
I-set
LRR_1
Ig_3
Ig_2
ig
LRR_EndoS
LRR_9
LRRNT
Ig_C17orf99
LRR_RPS2
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
134321845
NCBI-ProteinID:
XP_062859756
LinkDB
All DBs
Position
1:complement(47642358..47718892)
Genome browser
AA seq
616 aa
AA seq
DB search
MVAGEASGHSYLVACWQPILILMLGTVLSGSTTGCPSRCECNAQERSVVCHRKKLMSVPE
GIPSETRFLDLSKNRIKTINPEEFSGFPNLEELELNENTISTIEPGAFNNLYGLQTLGLR
SNKLKLIQLGVFTGLSNLTRLDISENKIVILLDHMFQDLYNLRSLEVGDNDLVFISHRAF
HGLNSLENLTLEKCNLTLVPTEAFTHLHSLNTLRLRNLNINTIRDYSFKRLSRLKVLEIA
NWPYLDTMTTNCLYGLNLTSLTITNANLTSIPYLALRHLVYLRFLNMSYNPISIIEGNKL
HDLLRLQELHLVGCRLVNIEPYSFKGLNYLKILNVSGNSLSTLEESAFHSVGNLETLVLY
DNPLACDCRLLWVFRRRWRLNFNRQQPTCASPEFVQGKEFKDFPDILQPNYFTCRKSRIR
DRKAQQTFVDEGTTVHFACQADGDPAPVIMWLTPHKQFITTKTIGRLTMFLDGTLEVRYA
QIQDNGTYVCIASNAGGNDTTLAHLHIHSYSPEWANQPNKTFAFISNQPSGDNGSNETKA
TIPFPFDIKTLIIATTMGFISFLGVVLFCLVLLFLWSRGKGNTKHNIEIEYVPRKSDAGL
SSGTSDAPRKFNMKMI
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atggtggcaggggaagcaagtgggcacagctacctggtggcatgctggcagcccatctta
attcttatgctgggcactgtgctgtctggctcaaccacaggctgcccttctcgctgtgag
tgcaatgcccaggagcgctctgtagtatgccaccgtaaaaagctgatgtcagttcctgag
ggtatcccatctgagactaggttcttggacctcagcaagaaccgtataaaaaccatcaac
ccagaggagttttctggctttccaaacttggaagaactggagctaaatgaaaacacaatc
tccaccatagaacctggagctttcaacaacctgtatggcctacagactcttggattacgc
agcaacaaactgaagcttattcagctaggtgtgtttacaggcctcagtaaccttacccgg
ctggacatcagtgagaataagatagtcatcctgctagatcacatgttccaggacctgtat
aacctgcgctctttggaagttggtgataatgacctggtgtttatatcccaccgagcattc
catggcctcaacagcctggaaaacctcaccttggaaaagtgcaatctgaccttggttcca
acagaggcatttacccatctacacagcctcaacaccttgcgtctacgtaaccttaacatc
aacaccattagagactactcctttaaacggctctcccgacttaaagttctggagattgcc
aactggccatacctggacaccatgacaactaactgcttgtatggtttaaatctaacttcg
ctaacaattaccaatgcaaatctgacttcgattccatatctagcacttcggcatctcgtt
tacctgcgatttttgaacatgtcctacaaccccatttcaatcatcgagggaaacaagctc
catgatctgctcagactgcaggagctccacctggttggctgtagattggttaatatagag
ccatattcatttaaaggcctcaactacttaaaaatcctgaatgtctctggaaattctcta
tccacactggaagaatcagccttccactcagtggggaacctggagaccctggtgctatat
gacaaccccctggcttgtgactgtaggcttctatgggtcttccgtcgtagatggaggctc
aacttcaaccggcagcaacccacatgtgcctcacctgagttcgtccaaggcaaggagttt
aaagatttcccagacatcttacagcccaattactttacgtgtcgtaagtccaggatccgg
gaccgcaaagcacagcagacatttgtggatgaagggacaacggtgcactttgcctgccag
gcagatggagatccagccccagtcattatgtggcttaccccacacaaacagttcatcact
acaaaaacgataggcaggctcaccatgtttcttgatggtactctggaggtgcgctatgcc
cagattcaggacaatggaacttatgtgtgcattgcaagtaatgctggtggaaatgacacc
actcttgctcatcttcacatccatagctactctcctgaatgggcgaaccagcctaacaag
acctttgctttcatttccaatcagcccagtggtgacaatggatccaatgagacaaaagct
accattccttttccttttgacatcaaaactctcatcatcgccaccactatggggttcatt
tcctttcttggtgtggtattattctgtctggtattgctatttctgtggagcaggggtaaa
ggtaataccaaacacaacattgagatcgaatatgtaccacgtaaatcagacgcagggctg
agcagtggtacgtctgacgctcctcgcaagtttaatatgaaaatgatttga
DBGET
integrated database retrieval system
